Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 SNORD115-10-201ENST00000365073 81 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-43-201ENST00000365503 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-36-201ENST00000365629 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 MTND1P14-201ENST00000427400 950 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SUMO1P3-201ENST00000439961 304 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 MTND2P39-201ENST00000457230 764 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 RNU6-475P-201ENST00000516073 104 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.78□□□□□ -2.53
NUP98P52948 AP000942.4-201ENST00000604811 241 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD115-40-201ENST00000606510 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 MIR6514-201ENST00000622549 70 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 SNORD12B-201ENST00000410433 91 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 RNU4-83P-201ENST00000410863 133 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.78□□□□□ -2.53
NUP98P52948 RNU7-87P-201ENST00000459343 62 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 AP003357.1-201ENST00000604497 148 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 AL590491.3-201ENST00000610731 82 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 MIR6082-201ENST00000613604 109 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 AL391262.2-201ENST00000622466 494 ntBASIC-0.78□□□□□ -2.53
NUP98P52948 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.78□□□□□ -2.53
NUP98P52948 MIR655-201ENST00000362159 97 ntBASIC-0.79□□□□□ -2.54
NUP98P52948 RNU6-879P-201ENST00000364328 108 ntBASIC-0.79□□□□□ -2.54
NUP98P52948 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.79□□□□□ -2.54
NUP98P52948 RNU6-95P-201ENST00000384697 107 ntBASIC-0.79□□□□□ -2.54
NUP98P52948 AL353193.1-201ENST00000421444 268 ntBASIC-0.79□□□□□ -2.54
NUP98P52948 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.79□□□□□ -2.54
NUP98P52948 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.79□□□□□ -2.54
NUP98P52948 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.79□□□□□ -2.54
NUP98P52948 AC091931.1-201ENST00000623488 728 ntBASIC-0.79□□□□□ -2.54
NUP98P52948 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 RNU6-522P-201ENST00000364497 107 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 RNU4-75P-201ENST00000364621 146 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 SNORD116-9-201ENST00000384000 95 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 RNU6-318P-201ENST00000384283 103 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 SNORD116-3-201ENST00000384287 95 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 RNU6-480P-201ENST00000384332 107 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 SNORD116-8-201ENST00000384365 95 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 SNORD116-7-201ENST00000384404 95 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 SNORD116-5-201ENST00000384462 95 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 MIR548O-201ENST00000408583 114 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 MIR378D2-201ENST00000580636 98 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 SNORD116-11-201ENST00000383882 92 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.8□□□□□ -2.54
NUP98P52948 AC083798.1-201ENST00000472671 131 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.8□□□□□ -2.54
NUP98P52948 RNU6-408P-201ENST00000515910 100 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 RN7SKP19-201ENST00000516016 252 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 RNU6-765P-201ENST00000516916 99 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 AC018462.2-201ENST00000605375 395 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 MIR6738-201ENST00000619620 64 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 AC068137.3-201ENST00000639191 341 ntBASIC-0.8□□□□□ -2.54
NUP98P52948 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.81□□□□□ -2.54
NUP98P52948 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.81□□□□□ -2.54
NUP98P52948 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.81□□□□□ -2.54
NUP98P52948 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.81□□□□□ -2.54
NUP98P52948 SNORA26.8-201ENST00000391306 124 ntBASIC-0.81□□□□□ -2.54
NUP98P52948 MIR190B-201ENST00000401119 79 ntBASIC-0.81□□□□□ -2.54
NUP98P52948 MIR548L-201ENST00000408303 86 ntBASIC-0.81□□□□□ -2.54
NUP98P52948 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.81□□□□□ -2.54
NUP98P52948 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.81□□□□□ -2.54
NUP98P52948 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.81□□□□□ -2.54
NUP98P52948 RNU6-1170P-201ENST00000515974 106 ntBASIC-0.81□□□□□ -2.54
NUP98P52948 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.81□□□□□ -2.54
NUP98P52948 AC018638.8-201ENST00000588755 281 ntBASIC-0.81□□□□□ -2.54
NUP98P52948 AL133255.1-201ENST00000606374 441 ntBASIC-0.81□□□□□ -2.54
NUP98P52948 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 RNU6-509P-201ENST00000363519 107 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 RNU7-115P-201ENST00000516433 55 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 RNU6-256P-201ENST00000516747 97 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 RNU4-20P-201ENST00000365601 151 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 SNORA27-201ENST00000384323 126 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 RNU6-24P-201ENST00000384440 107 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 AL603910.2-201ENST00000407268 136 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 AC244250.2-201ENST00000418731 148 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 AC023449.1-201ENST00000454464 154 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 RPL7P42-201ENST00000481005 679 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 AC131281.1-201ENST00000522984 164 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 MIR4752-201ENST00000579672 72 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 AC027449.1-201ENST00000608890 407 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 AC097520.1-201ENST00000624435 385 ntBASIC-0.82□□□□□ -2.54
NUP98P52948 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.83□□□□□ -2.54
NUP98P52948 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.83□□□□□ -2.54
NUP98P52948 RNU6-553P-201ENST00000364047 96 ntBASIC-0.83□□□□□ -2.54
NUP98P52948 RNA5SP205-201ENST00000364653 136 ntBASIC-0.83□□□□□ -2.54
NUP98P52948 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms