Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 Y_RNA.587-201ENST00000391210 103 ntBASIC1.55□□□□□ -2.16
CLCN3P51790 SNRPGP13-201ENST00000442212 177 ntBASIC1.55□□□□□ -2.16
CLCN3P51790 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.55□□□□□ -2.16
CLCN3P51790 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.55□□□□□ -2.16
CLCN3P51790 RNA5SP153-201ENST00000516498 76 ntBASIC1.55□□□□□ -2.16
CLCN3P51790 RNU7-149P-201ENST00000516739 59 ntBASIC1.55□□□□□ -2.16
CLCN3P51790 MIR3144-201ENST00000579460 79 ntBASIC1.55□□□□□ -2.16
CLCN3P51790 AL157834.3-201ENST00000615543 103 ntBASIC1.55□□□□□ -2.16
CLCN3P51790 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.55□□□□□ -2.16
CLCN3P51790 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.54□□□□□ -2.16
CLCN3P51790 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
CLCN3P51790 Y_RNA.66-201ENST00000362862 102 ntBASIC1.54□□□□□ -2.16
CLCN3P51790 Y_RNA.170-201ENST00000363746 110 ntBASIC1.54□□□□□ -2.16
CLCN3P51790 SNORD1A-201ENST00000364968 72 ntBASIC1.54□□□□□ -2.16
CLCN3P51790 SNORD50B-201ENST00000364995 70 ntBASIC1.54□□□□□ -2.16
CLCN3P51790 Y_RNA.327-201ENST00000365201 102 ntBASIC1.54□□□□□ -2.16
CLCN3P51790 RNU6-643P-201ENST00000384018 107 ntBASIC1.54□□□□□ -2.16
CLCN3P51790 Y_RNA.506-201ENST00000384494 102 ntBASIC1.54□□□□□ -2.16
CLCN3P51790 SNORD72-201ENST00000390994 80 ntBASIC1.54□□□□□ -2.16
CLCN3P51790 RNU6-197P-201ENST00000516680 100 ntBASIC1.54□□□□□ -2.16
CLCN3P51790 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.54□□□□□ -2.16
CLCN3P51790 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.54□□□□□ -2.16
CLCN3P51790 JPX_2.1-201ENST00000614161 69 ntBASIC1.54□□□□□ -2.16
CLCN3P51790 AC021753.1-201ENST00000635724 168 ntBASIC1.54□□□□□ -2.16
CLCN3P51790 U8.1-201ENST00000362843 134 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 RNU6-978P-201ENST00000364371 103 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 RNY1P5-201ENST00000383890 115 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 RNU6-804P-201ENST00000384286 107 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 Y_RNA.486-201ENST00000384398 107 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 RNU6-239P-201ENST00000390990 99 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 Y_RNA.621-201ENST00000411065 96 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 AC027119.1-201ENST00000440877 241 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CLCN3P51790 AC079140.2-201ENST00000506193 142 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 RNA5SP445-201ENST00000515889 115 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 RNA5SP168-201ENST00000516642 112 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 MTND5P41-201ENST00000517498 206 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 MIR4662B-201ENST00000579498 81 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 MIR4285-201ENST00000581001 85 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 MIR8063-201ENST00000621930 81 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 AC027279.3-201ENST00000625055 122 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 SNORD3E-202ENST00000627253 216 ntBASIC1.53□□□□□ -2.16
CLCN3P51790 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CLCN3P51790 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.17
CLCN3P51790 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
CLCN3P51790 Y_RNA.634-201ENST00000364811 113 ntBASIC1.52□□□□□ -2.17
CLCN3P51790 Y_RNA.622-201ENST00000411091 108 ntBASIC1.52□□□□□ -2.17
CLCN3P51790 CALM2P4-201ENST00000430810 426 ntBASIC1.52□□□□□ -2.17
CLCN3P51790 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.52□□□□□ -2.17
CLCN3P51790 SUMO1P3-201ENST00000439961 304 ntBASIC1.52□□□□□ -2.17
CLCN3P51790 AL121914.1-201ENST00000450188 156 ntBASIC1.52□□□□□ -2.17
CLCN3P51790 CYCTP-201ENST00000504253 315 ntBASIC1.52□□□□□ -2.17
CLCN3P51790 AL365434.2-201ENST00000607979 234 ntBASIC1.52□□□□□ -2.17
CLCN3P51790 AC006441.5-201ENST00000612680 209 ntBASIC1.52□□□□□ -2.17
CLCN3P51790 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CLCN3P51790 Y_RNA.91-201ENST00000363042 107 ntBASIC1.51□□□□□ -2.17
CLCN3P51790 RNU6-1130P-201ENST00000365434 107 ntBASIC1.51□□□□□ -2.17
CLCN3P51790 RNU6-597P-201ENST00000365620 102 ntBASIC1.51□□□□□ -2.17
CLCN3P51790 Y_RNA.432-201ENST00000384087 111 ntBASIC1.51□□□□□ -2.17
CLCN3P51790 MIR548A2-201ENST00000384956 97 ntBASIC1.51□□□□□ -2.17
CLCN3P51790 RNU6-131P-201ENST00000391144 107 ntBASIC1.51□□□□□ -2.17
CLCN3P51790 U8.16-201ENST00000391279 133 ntBASIC1.51□□□□□ -2.17
CLCN3P51790 RNU7-200P-201ENST00000516105 62 ntBASIC1.51□□□□□ -2.17
CLCN3P51790 RNU6-1299P-201ENST00000516316 100 ntBASIC1.51□□□□□ -2.17
CLCN3P51790 RNU6-126P-201ENST00000516685 103 ntBASIC1.51□□□□□ -2.17
CLCN3P51790 Y_RNA.714-201ENST00000517065 90 ntBASIC1.51□□□□□ -2.17
CLCN3P51790 AL353770.2-201ENST00000620024 78 ntBASIC1.51□□□□□ -2.17
CLCN3P51790 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CLCN3P51790 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.5□□□□□ -2.17
CLCN3P51790 RNY1P10-201ENST00000363268 113 ntBASIC1.5□□□□□ -2.17
CLCN3P51790 RNU6-833P-201ENST00000363486 107 ntBASIC1.5□□□□□ -2.17
CLCN3P51790 SNORD24-201ENST00000383884 75 ntBASIC1.5□□□□□ -2.17
CLCN3P51790 Y_RNA.398-201ENST00000383952 99 ntBASIC1.5□□□□□ -2.17
CLCN3P51790 RNU6-125P-201ENST00000384505 107 ntBASIC1.5□□□□□ -2.17
CLCN3P51790 RNU6-1065P-201ENST00000384513 106 ntBASIC1.5□□□□□ -2.17
CLCN3P51790 AC107027.2-201ENST00000512197 115 ntBASIC1.5□□□□□ -2.17
CLCN3P51790 RNU6-902P-201ENST00000517212 91 ntBASIC1.5□□□□□ -2.17
CLCN3P51790 AC120024.3-201ENST00000603167 156 ntBASIC1.5□□□□□ -2.17
CLCN3P51790 AC104465.1-201ENST00000611365 139 ntBASIC1.5□□□□□ -2.17
CLCN3P51790 Pinc.1-201ENST00000616452 154 ntBASIC1.5□□□□□ -2.17
CLCN3P51790 MIR337-201ENST00000362281 93 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 RNU6-199P-201ENST00000362954 107 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 SNORD68-201ENST00000363214 84 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 Y_RNA.336-201ENST00000365307 109 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 RNA5SP259-201ENST00000365541 109 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 RNU6-746P-201ENST00000384112 109 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 AL603908.1-201ENST00000406098 201 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 SNX2P2-201ENST00000424553 323 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 AC023449.1-201ENST00000454464 154 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 RNU1-123P-201ENST00000458950 160 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 AC004223.1-201ENST00000479840 271 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 SNORD45.4-201ENST00000516629 73 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 RNU6-1116P-201ENST00000517269 99 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 SUMO2P16-201ENST00000519475 264 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 AC007751.1-201ENST00000529260 376 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 MIR378D2-201ENST00000580636 98 ntBASIC1.49□□□□□ -2.17
CLCN3P51790 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CLCN3P51790 RNU6-888P-201ENST00000363010 101 ntBASIC1.48□□□□□ -2.17
CLCN3P51790 RNU6-268P-201ENST00000364174 107 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms