Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AC107297.1-201ENST00000459991 176 ntBASIC0.73□□□□□ -2.29
GPC3P51654 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.73□□□□□ -2.29
GPC3P51654 SNORA27.4-201ENST00000516650 95 ntBASIC0.73□□□□□ -2.29
GPC3P51654 AC044792.1-201ENST00000593294 196 ntBASIC0.73□□□□□ -2.29
GPC3P51654 AL136317.1-201ENST00000612653 226 ntBASIC0.73□□□□□ -2.29
GPC3P51654 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.72□□□□□ -2.29
GPC3P51654 RNU6-1272P-201ENST00000362776 107 ntBASIC0.72□□□□□ -2.29
GPC3P51654 Y_RNA.210-201ENST00000364161 110 ntBASIC0.72□□□□□ -2.29
GPC3P51654 Y_RNA.214-201ENST00000364201 112 ntBASIC0.72□□□□□ -2.29
GPC3P51654 RNU6-1138P-201ENST00000365359 106 ntBASIC0.72□□□□□ -2.29
GPC3P51654 RNU6-639P-201ENST00000384074 107 ntBASIC0.72□□□□□ -2.29
GPC3P51654 SNORD111-201ENST00000408139 94 ntBASIC0.72□□□□□ -2.29
GPC3P51654 RNU6-733P-201ENST00000410759 104 ntBASIC0.72□□□□□ -2.29
GPC3P51654 RNU6-847P-201ENST00000411115 108 ntBASIC0.72□□□□□ -2.29
GPC3P51654 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.72□□□□□ -2.29
GPC3P51654 MTND5P15-201ENST00000434246 349 ntBASIC0.72□□□□□ -2.29
GPC3P51654 AC067940.1-201ENST00000458411 300 ntBASIC0.72□□□□□ -2.29
GPC3P51654 snoU13.25-201ENST00000458945 104 ntBASIC0.72□□□□□ -2.29
GPC3P51654 RN7SKP164-201ENST00000516138 266 ntBASIC0.72□□□□□ -2.29
GPC3P51654 MIR2115-201ENST00000516657 100 ntBASIC0.72□□□□□ -2.29
GPC3P51654 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.72□□□□□ -2.29
GPC3P51654 AC020661.2-201ENST00000560114 134 ntBASIC0.72□□□□□ -2.29
GPC3P51654 MIR4680-201ENST00000580906 66 ntBASIC0.72□□□□□ -2.29
GPC3P51654 MIR548AR-201ENST00000582191 57 ntBASIC0.72□□□□□ -2.29
GPC3P51654 uc_338.4-201ENST00000616635 176 ntBASIC0.72□□□□□ -2.29
GPC3P51654 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.72□□□□□ -2.29
GPC3P51654 AC022140.2-201ENST00000623500 188 ntBASIC0.72□□□□□ -2.29
GPC3P51654 AC023934.1-201ENST00000574529 2389 ntBASIC0.72□□□□□ -2.29
GPC3P51654 UBE2WP1-201ENST00000362030 340 ntBASIC0.71□□□□□ -2.3
GPC3P51654 Y_RNA.138-201ENST00000363462 102 ntBASIC0.71□□□□□ -2.3
GPC3P51654 Y_RNA.422-201ENST00000384054 114 ntBASIC0.71□□□□□ -2.3
GPC3P51654 SNORA51.10-201ENST00000384418 136 ntBASIC0.71□□□□□ -2.3
GPC3P51654 MIR605-201ENST00000385078 83 ntBASIC0.71□□□□□ -2.3
GPC3P51654 MIR526A2-201ENST00000390198 65 ntBASIC0.71□□□□□ -2.3
GPC3P51654 MIR1185-1-201ENST00000408598 86 ntBASIC0.71□□□□□ -2.3
GPC3P51654 RNU6-121P-201ENST00000410525 99 ntBASIC0.71□□□□□ -2.3
GPC3P51654 ELOCP20-201ENST00000422460 345 ntBASIC0.71□□□□□ -2.3
GPC3P51654 AC005534.2-201ENST00000431047 433 ntBASIC0.71□□□□□ -2.3
GPC3P51654 Y_RNA.637-201ENST00000459424 114 ntBASIC0.71□□□□□ -2.3
GPC3P51654 AC091959.1-201ENST00000495857 238 ntBASIC0.71□□□□□ -2.3
GPC3P51654 AP003733.2-201ENST00000529409 171 ntBASIC0.71□□□□□ -2.3
GPC3P51654 AL356055.1-201ENST00000602528 446 ntBASIC0.71□□□□□ -2.3
GPC3P51654 AC015726.2-201ENST00000620112 122 ntBASIC0.71□□□□□ -2.3
GPC3P51654 MIR6513-201ENST00000621188 64 ntBASIC0.71□□□□□ -2.3
GPC3P51654 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.71□□□□□ -2.3
GPC3P51654 snoU2_19.2-201ENST00000363024 80 ntBASIC0.7□□□□□ -2.3
GPC3P51654 SNORA25.3-201ENST00000363205 127 ntBASIC0.7□□□□□ -2.3
GPC3P51654 Y_RNA.293-201ENST00000364908 93 ntBASIC0.7□□□□□ -2.3
GPC3P51654 RNU6-396P-201ENST00000365369 105 ntBASIC0.7□□□□□ -2.3
GPC3P51654 RNU6-342P-201ENST00000384521 104 ntBASIC0.7□□□□□ -2.3
GPC3P51654 Y_RNA.527-201ENST00000384573 102 ntBASIC0.7□□□□□ -2.3
GPC3P51654 AL603910.2-201ENST00000407268 136 ntBASIC0.7□□□□□ -2.3
GPC3P51654 MIR1278-201ENST00000408753 81 ntBASIC0.7□□□□□ -2.3
GPC3P51654 AL392103.1-201ENST00000447000 198 ntBASIC0.7□□□□□ -2.3
GPC3P51654 U7.7-201ENST00000459276 60 ntBASIC0.7□□□□□ -2.3
GPC3P51654 AC098869.1-201ENST00000481627 292 ntBASIC0.7□□□□□ -2.3
GPC3P51654 AL021707.8-201ENST00000609428 183 ntBASIC0.7□□□□□ -2.3
GPC3P51654 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.7□□□□□ -2.3
GPC3P51654 Y_RNA.394-201ENST00000383942 103 ntBASIC0.69□□□□□ -2.3
GPC3P51654 Y_RNA.541-201ENST00000384640 113 ntBASIC0.69□□□□□ -2.3
GPC3P51654 MIR613-201ENST00000385248 95 ntBASIC0.69□□□□□ -2.3
GPC3P51654 SNORD72-201ENST00000390994 80 ntBASIC0.69□□□□□ -2.3
GPC3P51654 RNU6-985P-201ENST00000410182 104 ntBASIC0.69□□□□□ -2.3
GPC3P51654 BTF3P11-201ENST00000426582 477 ntBASIC0.69□□□□□ -2.3
GPC3P51654 AC113410.1-201ENST00000505029 247 ntBASIC0.69□□□□□ -2.3
GPC3P51654 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.69□□□□□ -2.3
GPC3P51654 SERF1AP1-201ENST00000514575 187 ntBASIC0.69□□□□□ -2.3
GPC3P51654 Y_RNA.701-201ENST00000516812 110 ntBASIC0.69□□□□□ -2.3
GPC3P51654 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.69□□□□□ -2.3
GPC3P51654 AC109810.1-201ENST00000534066 224 ntBASIC0.69□□□□□ -2.3
GPC3P51654 AC131055.1-201ENST00000584626 316 ntBASIC0.69□□□□□ -2.3
GPC3P51654 Y_RNA.802-201ENST00000614892 130 ntBASIC0.69□□□□□ -2.3
GPC3P51654 U6.104-201ENST00000637979 90 ntBASIC0.69□□□□□ -2.3
GPC3P51654 Y_RNA.105-201ENST00000363182 111 ntBASIC0.68□□□□□ -2.3
GPC3P51654 Y_RNA.217-201ENST00000364214 105 ntBASIC0.68□□□□□ -2.3
GPC3P51654 SNORD113.3-201ENST00000364630 78 ntBASIC0.68□□□□□ -2.3
GPC3P51654 SNORA33.2-201ENST00000365413 134 ntBASIC0.68□□□□□ -2.3
GPC3P51654 SNORA26-201ENST00000391286 122 ntBASIC0.68□□□□□ -2.3
GPC3P51654 RNU6-613P-201ENST00000410412 108 ntBASIC0.68□□□□□ -2.3
GPC3P51654 AL035398.1-201ENST00000430869 322 ntBASIC0.68□□□□□ -2.3
GPC3P51654 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.68□□□□□ -2.3
GPC3P51654 AC087499.4-201ENST00000448505 178 ntBASIC0.68□□□□□ -2.3
GPC3P51654 Y_RNA.641-201ENST00000459414 105 ntBASIC0.68□□□□□ -2.3
GPC3P51654 COX6CP6-201ENST00000490840 228 ntBASIC0.68□□□□□ -2.3
GPC3P51654 RNU4-57P-201ENST00000515980 135 ntBASIC0.68□□□□□ -2.3
GPC3P51654 RNU6-1110P-201ENST00000516462 101 ntBASIC0.68□□□□□ -2.3
GPC3P51654 RNU7-149P-201ENST00000516739 59 ntBASIC0.68□□□□□ -2.3
GPC3P51654 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.68□□□□□ -2.3
GPC3P51654 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
GPC3P51654 RNU6-1227P-201ENST00000383981 107 ntBASIC0.67□□□□□ -2.3
GPC3P51654 SNORA8.3-201ENST00000384679 139 ntBASIC0.67□□□□□ -2.3
GPC3P51654 MT-TN-201ENST00000387400 73 ntBASIC0.67□□□□□ -2.3
GPC3P51654 SNORD28B-201ENST00000390993 75 ntBASIC0.67□□□□□ -2.3
GPC3P51654 MIR548O-201ENST00000408583 114 ntBASIC0.67□□□□□ -2.3
GPC3P51654 RNU6-994P-201ENST00000410507 111 ntBASIC0.67□□□□□ -2.3
GPC3P51654 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.67□□□□□ -2.3
GPC3P51654 SNORD77.4-201ENST00000516158 81 ntBASIC0.67□□□□□ -2.3
GPC3P51654 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.67□□□□□ -2.3
GPC3P51654 AC023827.1-201ENST00000569247 97 ntBASIC0.67□□□□□ -2.3
GPC3P51654 AC006006.1-201ENST00000603082 144 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms