Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.89□□□□□ -2.27
RAB28P51157 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
RAB28P51157 MIR4791-201ENST00000607666 84 ntBASIC0.89□□□□□ -2.27
RAB28P51157 MIR6516-201ENST00000630554 81 ntBASIC0.89□□□□□ -2.27
RAB28P51157 MIR6767-201ENST00000637302 66 ntBASIC0.89□□□□□ -2.27
RAB28P51157 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RAB28P51157 Y_RNA.118-201ENST00000363300 101 ntBASIC0.88□□□□□ -2.27
RAB28P51157 Y_RNA.547-201ENST00000384654 119 ntBASIC0.88□□□□□ -2.27
RAB28P51157 MIR548O-201ENST00000408583 114 ntBASIC0.88□□□□□ -2.27
RAB28P51157 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.88□□□□□ -2.27
RAB28P51157 SCARNA8-201ENST00000515924 131 ntBASIC0.88□□□□□ -2.27
RAB28P51157 RNU6-1338P-201ENST00000516328 91 ntBASIC0.88□□□□□ -2.27
RAB28P51157 RNU6-197P-201ENST00000516680 100 ntBASIC0.88□□□□□ -2.27
RAB28P51157 RNU6-570P-201ENST00000517051 105 ntBASIC0.88□□□□□ -2.27
RAB28P51157 SNORA4-201ENST00000584302 138 ntBASIC0.88□□□□□ -2.27
RAB28P51157 AC012433.1-201ENST00000588916 398 ntBASIC0.88□□□□□ -2.27
RAB28P51157 RNU6-94P-201ENST00000607728 107 ntBASIC0.88□□□□□ -2.27
RAB28P51157 AC106800.4-201ENST00000614905 153 ntBASIC0.88□□□□□ -2.27
RAB28P51157 RNU4-10P-201ENST00000364383 140 ntBASIC0.87□□□□□ -2.27
RAB28P51157 RNU6-1187P-201ENST00000364771 110 ntBASIC0.87□□□□□ -2.27
RAB28P51157 AC113618.1-201ENST00000416747 285 ntBASIC0.87□□□□□ -2.27
RAB28P51157 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.87□□□□□ -2.27
RAB28P51157 AC006006.1-201ENST00000603082 144 ntBASIC0.87□□□□□ -2.27
RAB28P51157 Y_RNA.802-201ENST00000614892 130 ntBASIC0.87□□□□□ -2.27
RAB28P51157 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.87□□□□□ -2.27
RAB28P51157 MTND1P7-201ENST00000632801 297 ntBASIC0.87□□□□□ -2.27
RAB28P51157 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
RAB28P51157 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
RAB28P51157 UBE2WP1-201ENST00000362030 340 ntBASIC0.86□□□□□ -2.27
RAB28P51157 RNU6-1138P-201ENST00000365359 106 ntBASIC0.86□□□□□ -2.27
RAB28P51157 MIR608-201ENST00000384820 100 ntBASIC0.86□□□□□ -2.27
RAB28P51157 MIR526A2-201ENST00000390198 65 ntBASIC0.86□□□□□ -2.27
RAB28P51157 SNORD111-201ENST00000408139 94 ntBASIC0.86□□□□□ -2.27
RAB28P51157 RNA5SP95-201ENST00000410319 137 ntBASIC0.86□□□□□ -2.27
RAB28P51157 RNU6-994P-201ENST00000410507 111 ntBASIC0.86□□□□□ -2.27
RAB28P51157 RNU6-1203P-201ENST00000410703 110 ntBASIC0.86□□□□□ -2.27
RAB28P51157 RNU6-847P-201ENST00000411115 108 ntBASIC0.86□□□□□ -2.27
RAB28P51157 SNORD77.4-201ENST00000516158 81 ntBASIC0.86□□□□□ -2.27
RAB28P51157 Y_RNA.666-201ENST00000516187 112 ntBASIC0.86□□□□□ -2.27
RAB28P51157 MIR2115-201ENST00000516657 100 ntBASIC0.86□□□□□ -2.27
RAB28P51157 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.86□□□□□ -2.27
RAB28P51157 DEFB108E-201ENST00000524692 240 ntBASIC0.86□□□□□ -2.27
RAB28P51157 MIR548AO-201ENST00000579992 96 ntBASIC0.86□□□□□ -2.27
RAB28P51157 MIR151B-201ENST00000584249 96 ntBASIC0.86□□□□□ -2.27
RAB28P51157 MIR6788-201ENST00000618842 66 ntBASIC0.86□□□□□ -2.27
RAB28P51157 Y_RNA.11-201ENST00000362375 109 ntBASIC0.85□□□□□ -2.27
RAB28P51157 SNORD113.3-201ENST00000364630 78 ntBASIC0.85□□□□□ -2.27
RAB28P51157 RNU6-396P-201ENST00000365369 105 ntBASIC0.85□□□□□ -2.27
RAB28P51157 RNU6-1227P-201ENST00000383981 107 ntBASIC0.85□□□□□ -2.27
RAB28P51157 SNORA2B-201ENST00000384583 137 ntBASIC0.85□□□□□ -2.27
RAB28P51157 SNORD89-201ENST00000390981 114 ntBASIC0.85□□□□□ -2.27
RAB28P51157 Y_RNA.587-201ENST00000391210 103 ntBASIC0.85□□□□□ -2.27
RAB28P51157 RNU2-64P-201ENST00000411315 191 ntBASIC0.85□□□□□ -2.27
RAB28P51157 AC067940.1-201ENST00000458411 300 ntBASIC0.85□□□□□ -2.27
RAB28P51157 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
RAB28P51157 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
RAB28P51157 MTCO2P24-201ENST00000515611 426 ntBASIC0.85□□□□□ -2.27
RAB28P51157 AC243994.1-201ENST00000618627 109 ntBASIC0.85□□□□□ -2.27
RAB28P51157 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.85□□□□□ -2.27
RAB28P51157 RNU6-211P-201ENST00000384047 107 ntBASIC0.84□□□□□ -2.27
RAB28P51157 RNU6-1289P-201ENST00000384431 106 ntBASIC0.84□□□□□ -2.27
RAB28P51157 RNU6-613P-201ENST00000410412 108 ntBASIC0.84□□□□□ -2.27
RAB28P51157 AL035398.1-201ENST00000430869 322 ntBASIC0.84□□□□□ -2.27
RAB28P51157 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.84□□□□□ -2.27
RAB28P51157 AC107297.1-201ENST00000459991 176 ntBASIC0.84□□□□□ -2.27
RAB28P51157 RNU2-13P-201ENST00000515909 113 ntBASIC0.84□□□□□ -2.27
RAB28P51157 MIR4662B-201ENST00000579498 81 ntBASIC0.84□□□□□ -2.27
RAB28P51157 MIR373-201ENST00000362273 69 ntBASIC0.83□□□□□ -2.28
RAB28P51157 Y_RNA.24-201ENST00000362508 103 ntBASIC0.83□□□□□ -2.28
RAB28P51157 Y_RNA.241-201ENST00000364470 117 ntBASIC0.83□□□□□ -2.28
RAB28P51157 Y_RNA.275-201ENST00000364726 110 ntBASIC0.83□□□□□ -2.28
RAB28P51157 RNU6-1335P-201ENST00000365426 107 ntBASIC0.83□□□□□ -2.28
RAB28P51157 Y_RNA.486-201ENST00000384398 107 ntBASIC0.83□□□□□ -2.28
RAB28P51157 SNORA8.3-201ENST00000384679 139 ntBASIC0.83□□□□□ -2.28
RAB28P51157 MIR605-201ENST00000385078 83 ntBASIC0.83□□□□□ -2.28
RAB28P51157 MIR548J-201ENST00000408833 112 ntBASIC0.83□□□□□ -2.28
RAB28P51157 U7.7-201ENST00000459276 60 ntBASIC0.83□□□□□ -2.28
RAB28P51157 RNU6-1223P-201ENST00000517124 104 ntBASIC0.83□□□□□ -2.28
RAB28P51157 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
RAB28P51157 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
RAB28P51157 RMST_2.1-201ENST00000617263 136 ntBASIC0.83□□□□□ -2.28
RAB28P51157 7SK.10-201ENST00000621414 298 ntBASIC0.83□□□□□ -2.28
RAB28P51157 Y_RNA.117-201ENST00000363294 101 ntBASIC0.82□□□□□ -2.28
RAB28P51157 Y_RNA.572-201ENST00000384757 98 ntBASIC0.82□□□□□ -2.28
RAB28P51157 RNU6-713P-201ENST00000384761 107 ntBASIC0.82□□□□□ -2.28
RAB28P51157 RNU6-1109P-201ENST00000391187 107 ntBASIC0.82□□□□□ -2.28
RAB28P51157 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.82□□□□□ -2.28
RAB28P51157 TRBVB-201ENST00000477100 408 ntBASIC0.82□□□□□ -2.28
RAB28P51157 MIR5688-201ENST00000580619 83 ntBASIC0.82□□□□□ -2.28
RAB28P51157 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.82□□□□□ -2.28
RAB28P51157 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
RAB28P51157 AC023934.1-201ENST00000574529 2389 ntBASIC0.82□□□□□ -2.28
RAB28P51157 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.81□□□□□ -2.28
RAB28P51157 Y_RNA.44-201ENST00000362676 108 ntBASIC0.81□□□□□ -2.28
RAB28P51157 SNORD115-28-201ENST00000363931 81 ntBASIC0.81□□□□□ -2.28
RAB28P51157 SNORD114-2-201ENST00000363953 78 ntBASIC0.81□□□□□ -2.28
RAB28P51157 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.81□□□□□ -2.28
RAB28P51157 AC007751.1-201ENST00000529260 376 ntBASIC0.81□□□□□ -2.28
RAB28P51157 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
RAB28P51157 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 249.1 ms