Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.08□□□□□ -2.24
PCP4P48539 RNU6-1258P-201ENST00000516911 111 ntBASIC1.08□□□□□ -2.24
PCP4P48539 AC025884.1-201ENST00000556034 378 ntBASIC1.08□□□□□ -2.24
PCP4P48539 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC1.08□□□□□ -2.24
PCP4P48539 MIR5007-201ENST00000583098 95 ntBASIC1.08□□□□□ -2.24
PCP4P48539 RNU6-1237P-201ENST00000384777 107 ntBASIC1.07□□□□□ -2.24
PCP4P48539 MIR197-201ENST00000384976 75 ntBASIC1.07□□□□□ -2.24
PCP4P48539 MIR27A-201ENST00000385073 78 ntBASIC1.07□□□□□ -2.24
PCP4P48539 MIR942-201ENST00000401111 86 ntBASIC1.07□□□□□ -2.24
PCP4P48539 AL603914.1-201ENST00000401964 204 ntBASIC1.07□□□□□ -2.24
PCP4P48539 RNU6-994P-201ENST00000410507 111 ntBASIC1.07□□□□□ -2.24
PCP4P48539 RNA5SP21-201ENST00000410917 96 ntBASIC1.07□□□□□ -2.24
PCP4P48539 AC015818.7-201ENST00000428754 109 ntBASIC1.07□□□□□ -2.24
PCP4P48539 AC087499.7-201ENST00000441958 109 ntBASIC1.07□□□□□ -2.24
PCP4P48539 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC1.07□□□□□ -2.24
PCP4P48539 AC012676.2-201ENST00000619258 186 ntBASIC1.07□□□□□ -2.24
PCP4P48539 MIR7843-201ENST00000622274 79 ntBASIC1.07□□□□□ -2.24
PCP4P48539 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
PCP4P48539 Y_RNA.171-201ENST00000363760 102 ntBASIC1.06□□□□□ -2.24
PCP4P48539 Y_RNA.354-201ENST00000365448 111 ntBASIC1.06□□□□□ -2.24
PCP4P48539 Y_RNA.420-201ENST00000384043 110 ntBASIC1.06□□□□□ -2.24
PCP4P48539 Y_RNA.506-201ENST00000384494 102 ntBASIC1.06□□□□□ -2.24
PCP4P48539 MIR30B-201ENST00000384850 88 ntBASIC1.06□□□□□ -2.24
PCP4P48539 RNA5SP144-201ENST00000410846 116 ntBASIC1.06□□□□□ -2.24
PCP4P48539 SNORD83.1-201ENST00000411362 77 ntBASIC1.06□□□□□ -2.24
PCP4P48539 SNORD46.2-201ENST00000516021 102 ntBASIC1.06□□□□□ -2.24
PCP4P48539 RNA5SP200-201ENST00000516360 103 ntBASIC1.06□□□□□ -2.24
PCP4P48539 RNA5SP61-201ENST00000516453 100 ntBASIC1.06□□□□□ -2.24
PCP4P48539 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.06□□□□□ -2.24
PCP4P48539 MT1CP-201ENST00000567054 174 ntBASIC1.06□□□□□ -2.24
PCP4P48539 Y_RNA.757-201ENST00000578934 114 ntBASIC1.06□□□□□ -2.24
PCP4P48539 RN7SL753P-201ENST00000581238 290 ntBASIC1.06□□□□□ -2.24
PCP4P48539 AC010332.2-201ENST00000613083 1904 ntBASIC1.06□□□□□ -2.24
PCP4P48539 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
PCP4P48539 AL391516.1-201ENST00000554380 2449 ntBASIC1.05□□□□□ -2.24
PCP4P48539 SNORA22-201ENST00000383907 134 ntBASIC1.05□□□□□ -2.24
PCP4P48539 Y_RNA.488-201ENST00000384403 102 ntBASIC1.05□□□□□ -2.24
PCP4P48539 SNORA22C-201ENST00000384614 134 ntBASIC1.05□□□□□ -2.24
PCP4P48539 MIR200A-201ENST00000384875 90 ntBASIC1.05□□□□□ -2.24
PCP4P48539 SNORA35-201ENST00000386104 128 ntBASIC1.05□□□□□ -2.24
PCP4P48539 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC1.05□□□□□ -2.24
PCP4P48539 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
PCP4P48539 RNU6-426P-201ENST00000516464 97 ntBASIC1.05□□□□□ -2.24
PCP4P48539 MIR5089-201ENST00000580047 84 ntBASIC1.05□□□□□ -2.24
PCP4P48539 AC108081.1-201ENST00000604358 221 ntBASIC1.05□□□□□ -2.24
PCP4P48539 AC011603.4-201ENST00000611325 277 ntBASIC1.05□□□□□ -2.24
PCP4P48539 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
PCP4P48539 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
PCP4P48539 SNORD114-24-201ENST00000365029 72 ntBASIC1.04□□□□□ -2.24
PCP4P48539 RNU6-1165P-201ENST00000410119 107 ntBASIC1.04□□□□□ -2.24
PCP4P48539 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.04□□□□□ -2.24
PCP4P48539 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.04□□□□□ -2.24
PCP4P48539 AC113410.1-201ENST00000505029 247 ntBASIC1.04□□□□□ -2.24
PCP4P48539 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.04□□□□□ -2.24
PCP4P48539 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
PCP4P48539 Y_RNA.294-201ENST00000364916 102 ntBASIC1.03□□□□□ -2.24
PCP4P48539 RNU6-934P-201ENST00000365154 107 ntBASIC1.03□□□□□ -2.24
PCP4P48539 Y_RNA.366-201ENST00000365540 102 ntBASIC1.03□□□□□ -2.24
PCP4P48539 MIR563-201ENST00000385080 79 ntBASIC1.03□□□□□ -2.24
PCP4P48539 SNORD89-201ENST00000390981 114 ntBASIC1.03□□□□□ -2.24
PCP4P48539 RN7SL30P-201ENST00000488416 306 ntBASIC1.03□□□□□ -2.24
PCP4P48539 RNU2-35P-201ENST00000516446 142 ntBASIC1.03□□□□□ -2.24
PCP4P48539 IGKV1D-32-201ENST00000517449 318 ntBASIC1.03□□□□□ -2.24
PCP4P48539 AC133485.4-201ENST00000561835 220 ntBASIC1.03□□□□□ -2.24
PCP4P48539 AC138907.4-201ENST00000570107 226 ntBASIC1.03□□□□□ -2.24
PCP4P48539 MIR3121-201ENST00000579680 77 ntBASIC1.03□□□□□ -2.24
PCP4P48539 MIR4305-201ENST00000583252 102 ntBASIC1.03□□□□□ -2.24
PCP4P48539 AC021443.1-201ENST00000604478 211 ntBASIC1.03□□□□□ -2.24
PCP4P48539 MIR6721-201ENST00000617181 87 ntBASIC1.03□□□□□ -2.24
PCP4P48539 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.03□□□□□ -2.24
PCP4P48539 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.02□□□□□ -2.25
PCP4P48539 RNU6-369P-201ENST00000362515 102 ntBASIC1.02□□□□□ -2.25
PCP4P48539 U8.2-201ENST00000363156 134 ntBASIC1.02□□□□□ -2.25
PCP4P48539 SNORA71.1-201ENST00000364523 117 ntBASIC1.02□□□□□ -2.25
PCP4P48539 Y_RNA.470-201ENST00000384307 117 ntBASIC1.02□□□□□ -2.25
PCP4P48539 RNU6-342P-201ENST00000384521 104 ntBASIC1.02□□□□□ -2.25
PCP4P48539 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.02□□□□□ -2.25
PCP4P48539 AL022718.1-201ENST00000412004 84 ntBASIC1.02□□□□□ -2.25
PCP4P48539 AL512326.2-201ENST00000426359 151 ntBASIC1.02□□□□□ -2.25
PCP4P48539 FABP5P4-201ENST00000437203 171 ntBASIC1.02□□□□□ -2.25
PCP4P48539 PDCD5P2-201ENST00000507570 312 ntBASIC1.02□□□□□ -2.25
PCP4P48539 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC1.02□□□□□ -2.25
PCP4P48539 AP001328.1-201ENST00000528550 176 ntBASIC1.02□□□□□ -2.25
PCP4P48539 MIR4771-2-201ENST00000577758 74 ntBASIC1.02□□□□□ -2.25
PCP4P48539 MIR4771-1-201ENST00000582617 74 ntBASIC1.02□□□□□ -2.25
PCP4P48539 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.02□□□□□ -2.25
PCP4P48539 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
PCP4P48539 MIR30D-201ENST00000362283 70 ntBASIC1.01□□□□□ -2.25
PCP4P48539 RNU6-774P-201ENST00000363238 107 ntBASIC1.01□□□□□ -2.25
PCP4P48539 RNU6-1335P-201ENST00000365426 107 ntBASIC1.01□□□□□ -2.25
PCP4P48539 SNORA18-201ENST00000384416 132 ntBASIC1.01□□□□□ -2.25
PCP4P48539 RNVU1-14-201ENST00000384770 164 ntBASIC1.01□□□□□ -2.25
PCP4P48539 COX6B1P1-201ENST00000415962 213 ntBASIC1.01□□□□□ -2.25
PCP4P48539 AC067940.1-201ENST00000458411 300 ntBASIC1.01□□□□□ -2.25
PCP4P48539 UBL5P1-201ENST00000507979 193 ntBASIC1.01□□□□□ -2.25
PCP4P48539 RNU6-113P-201ENST00000516653 101 ntBASIC1.01□□□□□ -2.25
PCP4P48539 RN7SKP57-201ENST00000517248 293 ntBASIC1.01□□□□□ -2.25
PCP4P48539 MIR3197-201ENST00000582241 73 ntBASIC1.01□□□□□ -2.25
PCP4P48539 AP001340.1-201ENST00000624405 217 ntBASIC1.01□□□□□ -2.25
PCP4P48539 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms