Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MIR1261-201ENST00000408659 82 ntBASIC1.61□□□□□ -2.15
SOX2P48431 RNU6-588P-201ENST00000410281 105 ntBASIC1.61□□□□□ -2.15
SOX2P48431 RNA5SP127-201ENST00000411051 133 ntBASIC1.61□□□□□ -2.15
SOX2P48431 RNU6-346P-201ENST00000516288 111 ntBASIC1.61□□□□□ -2.15
SOX2P48431 MIR1273D-201ENST00000577266 86 ntBASIC1.61□□□□□ -2.15
SOX2P48431 MIR548X2-201ENST00000579776 100 ntBASIC1.61□□□□□ -2.15
SOX2P48431 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SOX2P48431 Y_RNA.343-201ENST00000365354 112 ntBASIC1.6□□□□□ -2.15
SOX2P48431 Y_RNA.410-201ENST00000383992 113 ntBASIC1.6□□□□□ -2.15
SOX2P48431 MIR526A1-201ENST00000384897 85 ntBASIC1.6□□□□□ -2.15
SOX2P48431 MIR30A-201ENST00000385092 71 ntBASIC1.6□□□□□ -2.15
SOX2P48431 MIR624-201ENST00000385217 97 ntBASIC1.6□□□□□ -2.15
SOX2P48431 SNORA3.2-201ENST00000408221 125 ntBASIC1.6□□□□□ -2.15
SOX2P48431 AF228730.3-201ENST00000436691 102 ntBASIC1.6□□□□□ -2.15
SOX2P48431 AC087499.4-201ENST00000448505 178 ntBASIC1.6□□□□□ -2.15
SOX2P48431 AC024614.2-201ENST00000577584 372 ntBASIC1.6□□□□□ -2.15
SOX2P48431 FAM106DP-201ENST00000586416 501 ntBASIC1.6□□□□□ -2.15
SOX2P48431 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.6□□□□□ -2.15
SOX2P48431 AL590808.1-201ENST00000618696 141 ntBASIC1.6□□□□□ -2.15
SOX2P48431 AL442644.1-201ENST00000454390 3105 ntBASIC1.59□□□□□ -2.15
SOX2P48431 Y_RNA.37-201ENST00000362606 108 ntBASIC1.59□□□□□ -2.15
SOX2P48431 U8.2-201ENST00000363156 134 ntBASIC1.59□□□□□ -2.15
SOX2P48431 SNORA2.2-201ENST00000365473 135 ntBASIC1.59□□□□□ -2.15
SOX2P48431 RNU6-1336P-201ENST00000383886 109 ntBASIC1.59□□□□□ -2.15
SOX2P48431 RN7SKP223-201ENST00000410582 62 ntBASIC1.59□□□□□ -2.15
SOX2P48431 CYCSP49-201ENST00000420810 319 ntBASIC1.59□□□□□ -2.15
SOX2P48431 HMGN2P23-201ENST00000456759 269 ntBASIC1.59□□□□□ -2.15
SOX2P48431 snoU13.9-201ENST00000458927 103 ntBASIC1.59□□□□□ -2.15
SOX2P48431 RNU4-57P-201ENST00000515980 135 ntBASIC1.59□□□□□ -2.15
SOX2P48431 RNU6-322P-201ENST00000516010 103 ntBASIC1.59□□□□□ -2.15
SOX2P48431 SNORA25.12-201ENST00000516202 82 ntBASIC1.59□□□□□ -2.15
SOX2P48431 AC064859.1-201ENST00000624741 174 ntBASIC1.59□□□□□ -2.15
SOX2P48431 RNU6-1189P-201ENST00000383958 107 ntBASIC1.58□□□□□ -2.16
SOX2P48431 MIR504-201ENST00000385065 83 ntBASIC1.58□□□□□ -2.16
SOX2P48431 SNORD77.3-201ENST00000391113 65 ntBASIC1.58□□□□□ -2.16
SOX2P48431 RNA5SP425-201ENST00000410336 112 ntBASIC1.58□□□□□ -2.16
SOX2P48431 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.58□□□□□ -2.16
SOX2P48431 AC015688.6-201ENST00000577737 104 ntBASIC1.58□□□□□ -2.16
SOX2P48431 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.58□□□□□ -2.16
SOX2P48431 RNU6-187P-201ENST00000384139 106 ntBASIC1.57□□□□□ -2.16
SOX2P48431 MIR569-201ENST00000385228 96 ntBASIC1.57□□□□□ -2.16
SOX2P48431 U8.17-201ENST00000391292 132 ntBASIC1.57□□□□□ -2.16
SOX2P48431 AL445685.2-201ENST00000422551 342 ntBASIC1.57□□□□□ -2.16
SOX2P48431 AC003989.2-201ENST00000440224 169 ntBASIC1.57□□□□□ -2.16
SOX2P48431 RNU6-917P-201ENST00000516294 104 ntBASIC1.57□□□□□ -2.16
SOX2P48431 AC090049.2-201ENST00000550377 109 ntBASIC1.57□□□□□ -2.16
SOX2P48431 MIR3122-201ENST00000577243 73 ntBASIC1.57□□□□□ -2.16
SOX2P48431 MIR3198-2-201ENST00000577868 80 ntBASIC1.57□□□□□ -2.16
SOX2P48431 MIR3618-201ENST00000580330 88 ntBASIC1.57□□□□□ -2.16
SOX2P48431 AC131055.1-201ENST00000584626 316 ntBASIC1.57□□□□□ -2.16
SOX2P48431 MIR8063-201ENST00000621930 81 ntBASIC1.57□□□□□ -2.16
SOX2P48431 SNORA1.2-201ENST00000365189 134 ntBASIC1.56□□□□□ -2.16
SOX2P48431 Y_RNA.584-201ENST00000391090 114 ntBASIC1.56□□□□□ -2.16
SOX2P48431 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.56□□□□□ -2.16
SOX2P48431 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SOX2P48431 AC005908.1-201ENST00000468701 347 ntBASIC1.56□□□□□ -2.16
SOX2P48431 AC092991.1-201ENST00000477176 376 ntBASIC1.56□□□□□ -2.16
SOX2P48431 SNORA18.7-201ENST00000516910 131 ntBASIC1.56□□□□□ -2.16
SOX2P48431 AP003484.1-201ENST00000530974 250 ntBASIC1.56□□□□□ -2.16
SOX2P48431 WWP1P1-201ENST00000466609 2769 ntBASIC1.55□□□□□ -2.16
SOX2P48431 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SOX2P48431 Y_RNA.241-201ENST00000364470 117 ntBASIC1.55□□□□□ -2.16
SOX2P48431 SNORD48-201ENST00000364953 64 ntBASIC1.55□□□□□ -2.16
SOX2P48431 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
SOX2P48431 Y_RNA.497-201ENST00000384447 98 ntBASIC1.55□□□□□ -2.16
SOX2P48431 MIR613-201ENST00000385248 95 ntBASIC1.55□□□□□ -2.16
SOX2P48431 MIR653-201ENST00000385279 96 ntBASIC1.55□□□□□ -2.16
SOX2P48431 AL451046.2-201ENST00000403074 277 ntBASIC1.55□□□□□ -2.16
SOX2P48431 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.55□□□□□ -2.16
SOX2P48431 RNU6-938P-201ENST00000411285 103 ntBASIC1.55□□□□□ -2.16
SOX2P48431 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.55□□□□□ -2.16
SOX2P48431 HSPE1P24-201ENST00000450782 238 ntBASIC1.55□□□□□ -2.16
SOX2P48431 RNU7-197P-201ENST00000458836 62 ntBASIC1.55□□□□□ -2.16
SOX2P48431 snoU13.26-201ENST00000459452 105 ntBASIC1.55□□□□□ -2.16
SOX2P48431 SNORD123-201ENST00000459473 70 ntBASIC1.55□□□□□ -2.16
SOX2P48431 RNU6-237P-201ENST00000515985 71 ntBASIC1.55□□□□□ -2.16
SOX2P48431 RNU6-426P-201ENST00000516464 97 ntBASIC1.55□□□□□ -2.16
SOX2P48431 SNORD36C-201ENST00000516733 66 ntBASIC1.55□□□□□ -2.16
SOX2P48431 RNU7-181P-201ENST00000517234 74 ntBASIC1.55□□□□□ -2.16
SOX2P48431 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.55□□□□□ -2.16
SOX2P48431 MIR5197-201ENST00000583721 112 ntBASIC1.55□□□□□ -2.16
SOX2P48431 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.55□□□□□ -2.16
SOX2P48431 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.55□□□□□ -2.16
SOX2P48431 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
SOX2P48431 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
SOX2P48431 Y_RNA.251-201ENST00000364551 99 ntBASIC1.54□□□□□ -2.16
SOX2P48431 SNORD50.2-201ENST00000365465 70 ntBASIC1.54□□□□□ -2.16
SOX2P48431 SNORA40.5-201ENST00000391061 128 ntBASIC1.54□□□□□ -2.16
SOX2P48431 AL392103.1-201ENST00000447000 198 ntBASIC1.54□□□□□ -2.16
SOX2P48431 AC107297.1-201ENST00000459991 176 ntBASIC1.54□□□□□ -2.16
SOX2P48431 RPS29P11-201ENST00000496507 171 ntBASIC1.54□□□□□ -2.16
SOX2P48431 SNORA74.3-201ENST00000517108 154 ntBASIC1.54□□□□□ -2.16
SOX2P48431 MIR7843-201ENST00000622274 79 ntBASIC1.54□□□□□ -2.16
SOX2P48431 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.54□□□□□ -2.16
SOX2P48431 SNORD115-34-201ENST00000362441 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-12-201ENST00000362583 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 Y_RNA.52-201ENST00000362760 96 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD33-201ENST00000362761 85 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-29-201ENST00000362834 82 ntBASIC1.53□□□□□ -2.16
SOX2P48431 SNORD115-9-201ENST00000362912 82 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms