Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNU6-482P-201ENST00000391068 107 ntBASIC1.27□□□□□ -2.21
APOBEC1P41238 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.27□□□□□ -2.21
APOBEC1P41238 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.27□□□□□ -2.21
APOBEC1P41238 Y_RNA.797-201ENST00000515977 94 ntBASIC1.27□□□□□ -2.21
APOBEC1P41238 RNU7-25P-201ENST00000516544 62 ntBASIC1.27□□□□□ -2.21
APOBEC1P41238 MIR4308-201ENST00000580634 81 ntBASIC1.27□□□□□ -2.21
APOBEC1P41238 MIR4303-201ENST00000581299 66 ntBASIC1.27□□□□□ -2.21
APOBEC1P41238 MIR8065-201ENST00000620577 100 ntBASIC1.27□□□□□ -2.21
APOBEC1P41238 AC078938.1-201ENST00000620993 318 ntBASIC1.27□□□□□ -2.21
APOBEC1P41238 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
APOBEC1P41238 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.26□□□□□ -2.21
APOBEC1P41238 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
APOBEC1P41238 RNA5SP432-201ENST00000362480 116 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 Y_RNA.634-201ENST00000364811 113 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 SNORA1.2-201ENST00000365189 134 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 SNORD24-201ENST00000383884 75 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 Y_RNA.547-201ENST00000384654 119 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 RNU6-1067P-201ENST00000384752 107 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 Y_RNA.571-201ENST00000384753 98 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 RNU6-578P-201ENST00000390980 103 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 U8.17-201ENST00000391292 132 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 AL121914.1-201ENST00000450188 156 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 RNU6-165P-201ENST00000517170 99 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 AL160236.1-201ENST00000556317 195 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 AC130289.1-201ENST00000577321 73 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 AL512598.1-201ENST00000610158 273 ntBASIC1.26□□□□□ -2.21
APOBEC1P41238 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.26□□□□□ -2.21
APOBEC1P41238 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.26□□□□□ -2.21
APOBEC1P41238 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.25□□□□□ -2.21
APOBEC1P41238 RNU6-1020P-201ENST00000363684 107 ntBASIC1.25□□□□□ -2.21
APOBEC1P41238 RNA5SP99-201ENST00000364020 114 ntBASIC1.25□□□□□ -2.21
APOBEC1P41238 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.25□□□□□ -2.21
APOBEC1P41238 RNU6-693P-201ENST00000516134 107 ntBASIC1.25□□□□□ -2.21
APOBEC1P41238 RNU6-197P-201ENST00000516680 100 ntBASIC1.25□□□□□ -2.21
APOBEC1P41238 RNU1-92P-201ENST00000517017 135 ntBASIC1.25□□□□□ -2.21
APOBEC1P41238 AC109810.1-201ENST00000534066 224 ntBASIC1.25□□□□□ -2.21
APOBEC1P41238 MIR4764-201ENST00000580680 88 ntBASIC1.25□□□□□ -2.21
APOBEC1P41238 AC108706.1-201ENST00000611053 297 ntBASIC1.25□□□□□ -2.21
APOBEC1P41238 MIR7974-201ENST00000615835 79 ntBASIC1.25□□□□□ -2.21
APOBEC1P41238 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.25□□□□□ -2.21
APOBEC1P41238 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
APOBEC1P41238 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
APOBEC1P41238 Y_RNA.182-201ENST00000363880 111 ntBASIC1.24□□□□□ -2.21
APOBEC1P41238 RNU4-43P-201ENST00000410628 137 ntBASIC1.24□□□□□ -2.21
APOBEC1P41238 RNU6-847P-201ENST00000411115 108 ntBASIC1.24□□□□□ -2.21
APOBEC1P41238 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.24□□□□□ -2.21
APOBEC1P41238 RNU4-57P-201ENST00000515980 135 ntBASIC1.24□□□□□ -2.21
APOBEC1P41238 AC097639.2-201ENST00000603159 172 ntBASIC1.24□□□□□ -2.21
APOBEC1P41238 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.24□□□□□ -2.21
APOBEC1P41238 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.24□□□□□ -2.21
APOBEC1P41238 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
APOBEC1P41238 RNU6-888P-201ENST00000363010 101 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 Y_RNA.91-201ENST00000363042 107 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 Y_RNA.140-201ENST00000363474 103 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 SNORD115-28-201ENST00000363931 81 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 Y_RNA.257-201ENST00000364596 102 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 Y_RNA.297-201ENST00000364950 91 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 Y_RNA.435-201ENST00000384095 112 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 SNORD61-201ENST00000384252 73 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 SNORA17.3-201ENST00000391159 129 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 RNU6-918P-201ENST00000391219 106 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.23□□□□□ -2.21
APOBEC1P41238 AL138752.1-201ENST00000452964 351 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 RNU6-561P-201ENST00000516222 102 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 RNU7-181P-201ENST00000517234 74 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 MIR548AR-201ENST00000582191 57 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
APOBEC1P41238 AL161722.3-201ENST00000605789 2983 ntBASIC1.23□□□□□ -2.21
APOBEC1P41238 Y_RNA.66-201ENST00000362862 102 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 Y_RNA.274-201ENST00000364714 101 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 RNU6-200P-201ENST00000364743 107 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 Y_RNA.370-201ENST00000365589 108 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 MIR758-201ENST00000390227 88 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 RNU6-955P-201ENST00000410497 104 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 RNU6-1054P-201ENST00000411293 104 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.22□□□□□ -2.21
APOBEC1P41238 AC087499.4-201ENST00000448505 178 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 AC107297.1-201ENST00000459991 176 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 AL133373.1-201ENST00000497098 94 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 RNA5SP458-201ENST00000516188 119 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 RNA5SP61-201ENST00000516453 100 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 RNU6-1270P-201ENST00000517128 108 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 AL096861.1-201ENST00000610899 123 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 AC134878.1-201ENST00000619901 243 ntBASIC1.22□□□□□ -2.21
APOBEC1P41238 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.22□□□□□ -2.21
APOBEC1P41238 Y_RNA.75-201ENST00000362927 97 ntBASIC1.21□□□□□ -2.22
APOBEC1P41238 RNU6-275P-201ENST00000364910 107 ntBASIC1.21□□□□□ -2.22
APOBEC1P41238 MIR518F-201ENST00000384973 87 ntBASIC1.21□□□□□ -2.22
APOBEC1P41238 SNORD28B-201ENST00000390993 75 ntBASIC1.21□□□□□ -2.22
APOBEC1P41238 RNU4-62P-201ENST00000410125 130 ntBASIC1.21□□□□□ -2.22
APOBEC1P41238 Y_RNA.644-201ENST00000459006 113 ntBASIC1.21□□□□□ -2.22
APOBEC1P41238 Y_RNA.674-201ENST00000516362 113 ntBASIC1.21□□□□□ -2.22
APOBEC1P41238 AC007751.1-201ENST00000529260 376 ntBASIC1.21□□□□□ -2.22
APOBEC1P41238 AC008133.2-201ENST00000624540 351 ntBASIC1.21□□□□□ -2.22
APOBEC1P41238 RNA5SP48-201ENST00000363969 126 ntBASIC1.2□□□□□ -2.22
APOBEC1P41238 RNU6-47P-201ENST00000383866 107 ntBASIC1.2□□□□□ -2.22
APOBEC1P41238 MIR548A2-201ENST00000384956 97 ntBASIC1.2□□□□□ -2.22
APOBEC1P41238 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
APOBEC1P41238 Y_RNA.793-201ENST00000411222 111 ntBASIC1.2□□□□□ -2.22
APOBEC1P41238 AC108667.1-201ENST00000428618 249 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms