Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 RNU6-1076P-201ENST00000410397 104 ntBASIC0.2□□□□□ -2.38
MDH1P40925 RNU6-355P-201ENST00000410427 104 ntBASIC0.2□□□□□ -2.38
MDH1P40925 RNU6-791P-201ENST00000410467 104 ntBASIC0.2□□□□□ -2.38
MDH1P40925 RNU6-705P-201ENST00000410601 104 ntBASIC0.2□□□□□ -2.38
MDH1P40925 RNU6-1100P-201ENST00000410691 104 ntBASIC0.2□□□□□ -2.38
MDH1P40925 RNU6-860P-201ENST00000410860 104 ntBASIC0.2□□□□□ -2.38
MDH1P40925 RNU6-1217P-201ENST00000411276 104 ntBASIC0.2□□□□□ -2.38
MDH1P40925 RNU6-785P-201ENST00000411324 104 ntBASIC0.2□□□□□ -2.38
MDH1P40925 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
MDH1P40925 Y_RNA.673-201ENST00000516306 88 ntBASIC0.2□□□□□ -2.38
MDH1P40925 SNORA40.14-201ENST00000516543 86 ntBASIC0.2□□□□□ -2.38
MDH1P40925 AC092447.9-201ENST00000603395 144 ntBASIC0.2□□□□□ -2.38
MDH1P40925 SNORD113-5-201ENST00000607261 78 ntBASIC0.2□□□□□ -2.38
MDH1P40925 U6.90-201ENST00000614007 104 ntBASIC0.2□□□□□ -2.38
MDH1P40925 U6.70-201ENST00000620287 104 ntBASIC0.2□□□□□ -2.38
MDH1P40925 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
MDH1P40925 RNU4-80P-201ENST00000363200 141 ntBASIC0.19□□□□□ -2.38
MDH1P40925 RNU6-144P-201ENST00000383951 107 ntBASIC0.19□□□□□ -2.38
MDH1P40925 RNU2-14P-201ENST00000411053 191 ntBASIC0.19□□□□□ -2.38
MDH1P40925 Y_RNA.661-201ENST00000516003 99 ntBASIC0.19□□□□□ -2.38
MDH1P40925 RNU6-958P-201ENST00000516995 106 ntBASIC0.19□□□□□ -2.38
MDH1P40925 Y_RNA.718-201ENST00000517110 102 ntBASIC0.19□□□□□ -2.38
MDH1P40925 AC084781.2-201ENST00000615568 161 ntBASIC0.19□□□□□ -2.38
MDH1P40925 Y_RNA.143-201ENST00000363520 106 ntBASIC0.18□□□□□ -2.38
MDH1P40925 RNU6-801P-201ENST00000364087 105 ntBASIC0.18□□□□□ -2.38
MDH1P40925 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
MDH1P40925 SNORD100-201ENST00000408573 76 ntBASIC0.18□□□□□ -2.38
MDH1P40925 AC090844.1-201ENST00000422019 156 ntBASIC0.18□□□□□ -2.38
MDH1P40925 AC087499.4-201ENST00000448505 178 ntBASIC0.18□□□□□ -2.38
MDH1P40925 RNU6-1170P-201ENST00000515974 106 ntBASIC0.18□□□□□ -2.38
MDH1P40925 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.18□□□□□ -2.38
MDH1P40925 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.17□□□□□ -2.38
MDH1P40925 MIR103A1-201ENST00000362165 78 ntBASIC0.17□□□□□ -2.38
MDH1P40925 RNU6-1205P-201ENST00000363625 106 ntBASIC0.17□□□□□ -2.38
MDH1P40925 Y_RNA.187-201ENST00000363918 113 ntBASIC0.17□□□□□ -2.38
MDH1P40925 RNA5SP517-201ENST00000364724 117 ntBASIC0.17□□□□□ -2.38
MDH1P40925 SNORD116-29-201ENST00000384516 83 ntBASIC0.17□□□□□ -2.38
MDH1P40925 MIR1257-201ENST00000408490 117 ntBASIC0.17□□□□□ -2.38
MDH1P40925 MTND1P14-201ENST00000427400 950 ntBASIC0.17□□□□□ -2.38
MDH1P40925 SNRPGP12-201ENST00000449481 213 ntBASIC0.17□□□□□ -2.38
MDH1P40925 RNU7-53P-201ENST00000516705 60 ntBASIC0.17□□□□□ -2.38
MDH1P40925 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.17□□□□□ -2.38
MDH1P40925 AC090897.1-201ENST00000580909 226 ntBASIC0.17□□□□□ -2.38
MDH1P40925 AC022140.2-201ENST00000623500 188 ntBASIC0.17□□□□□ -2.38
MDH1P40925 AL606534.2-204ENST00000635008 178 ntBASIC0.17□□□□□ -2.38
MDH1P40925 AC010332.2-201ENST00000613083 1904 ntBASIC0.17□□□□□ -2.38
MDH1P40925 SNORD44.1-201ENST00000363202 61 ntBASIC0.16□□□□□ -2.38
MDH1P40925 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
MDH1P40925 Y_RNA.142-201ENST00000363491 102 ntBASIC0.16□□□□□ -2.38
MDH1P40925 RNU1-115P-201ENST00000365329 160 ntBASIC0.16□□□□□ -2.38
MDH1P40925 MIR518F-201ENST00000384973 87 ntBASIC0.16□□□□□ -2.38
MDH1P40925 MIR125B2-201ENST00000385128 89 ntBASIC0.16□□□□□ -2.38
MDH1P40925 SNORA26.5-201ENST00000391215 123 ntBASIC0.16□□□□□ -2.38
MDH1P40925 MTCO1P5-201ENST00000433573 344 ntBASIC0.16□□□□□ -2.38
MDH1P40925 RNU7-73P-201ENST00000458743 63 ntBASIC0.16□□□□□ -2.38
MDH1P40925 AC091959.1-201ENST00000495857 238 ntBASIC0.16□□□□□ -2.38
MDH1P40925 RNU7-149P-201ENST00000516739 59 ntBASIC0.16□□□□□ -2.38
MDH1P40925 PVT1_3.1-201ENST00000620853 95 ntBASIC0.16□□□□□ -2.38
MDH1P40925 AC139792.2-201ENST00000624218 587 ntBASIC0.16□□□□□ -2.38
MDH1P40925 MIR1302-1-201ENST00000637932 143 ntBASIC0.16□□□□□ -2.38
MDH1P40925 Y_RNA.14-201ENST00000362415 103 ntBASIC0.15□□□□□ -2.39
MDH1P40925 Y_RNA.118-201ENST00000363300 101 ntBASIC0.15□□□□□ -2.39
MDH1P40925 SNORD115-28-201ENST00000363931 81 ntBASIC0.15□□□□□ -2.39
MDH1P40925 RNA5SP117-201ENST00000365294 118 ntBASIC0.15□□□□□ -2.39
MDH1P40925 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
MDH1P40925 RNU2-70P-201ENST00000410718 179 ntBASIC0.15□□□□□ -2.39
MDH1P40925 BTF3P11-201ENST00000426582 477 ntBASIC0.15□□□□□ -2.39
MDH1P40925 RNA5SP94-201ENST00000516917 108 ntBASIC0.15□□□□□ -2.39
MDH1P40925 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.15□□□□□ -2.39
MDH1P40925 AP000942.4-201ENST00000604811 241 ntBASIC0.15□□□□□ -2.39
MDH1P40925 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.15□□□□□ -2.39
MDH1P40925 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.15□□□□□ -2.39
MDH1P40925 Y_RNA.471-201ENST00000384312 102 ntBASIC0.14□□□□□ -2.39
MDH1P40925 MIR588-201ENST00000384900 83 ntBASIC0.14□□□□□ -2.39
MDH1P40925 RNU6-308P-201ENST00000390957 107 ntBASIC0.14□□□□□ -2.39
MDH1P40925 SNORA40.5-201ENST00000391061 128 ntBASIC0.14□□□□□ -2.39
MDH1P40925 RNA5SP496-201ENST00000391240 109 ntBASIC0.14□□□□□ -2.39
MDH1P40925 RNU6-1165P-201ENST00000410119 107 ntBASIC0.14□□□□□ -2.39
MDH1P40925 RNU7-102P-201ENST00000458948 62 ntBASIC0.14□□□□□ -2.39
MDH1P40925 RNU6-863P-201ENST00000515989 104 ntBASIC0.14□□□□□ -2.39
MDH1P40925 RNU6-277P-201ENST00000516272 106 ntBASIC0.14□□□□□ -2.39
MDH1P40925 RNU4-77P-201ENST00000516692 156 ntBASIC0.14□□□□□ -2.39
MDH1P40925 SNORA20.3-201ENST00000516880 132 ntBASIC0.14□□□□□ -2.39
MDH1P40925 MIR4662B-201ENST00000579498 81 ntBASIC0.14□□□□□ -2.39
MDH1P40925 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
MDH1P40925 MIR924-201ENST00000638017 53 ntBASIC0.14□□□□□ -2.39
MDH1P40925 RNU6-1115P-201ENST00000362490 106 ntBASIC0.13□□□□□ -2.39
MDH1P40925 MIR489-201ENST00000384923 84 ntBASIC0.13□□□□□ -2.39
MDH1P40925 RNU7-185P-201ENST00000459215 60 ntBASIC0.13□□□□□ -2.39
MDH1P40925 Y_RNA.666-201ENST00000516187 112 ntBASIC0.13□□□□□ -2.39
MDH1P40925 RNU6-191P-201ENST00000516295 94 ntBASIC0.13□□□□□ -2.39
MDH1P40925 RN7SL793P-201ENST00000583259 296 ntBASIC0.13□□□□□ -2.39
MDH1P40925 MIR6740-201ENST00000618268 113 ntBASIC0.13□□□□□ -2.39
MDH1P40925 AC010487.4-201ENST00000637027 61 ntBASIC0.13□□□□□ -2.39
MDH1P40925 Z97988.1-201ENST00000637697 135 ntBASIC0.13□□□□□ -2.39
MDH1P40925 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.13□□□□□ -2.39
MDH1P40925 Y_RNA.252-201ENST00000364556 101 ntBASIC0.12□□□□□ -2.39
MDH1P40925 SNORA1.1-201ENST00000364671 133 ntBASIC0.12□□□□□ -2.39
MDH1P40925 RNU6-1138P-201ENST00000365359 106 ntBASIC0.12□□□□□ -2.39
MDH1P40925 Y_RNA.393-201ENST00000383936 102 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms