Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC117470.1-201ENST00000381974 330 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 RNU6-442P-201ENST00000383968 104 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 RNU6-1067P-201ENST00000384752 107 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 MIR516B2-201ENST00000385190 85 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 MIR1278-201ENST00000408753 81 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 MIR1252-201ENST00000408861 65 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 AC104332.1-201ENST00000440471 797 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 AC023449.1-201ENST00000454464 154 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 RNU6-1007P-201ENST00000516586 107 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 SNORA18.7-201ENST00000516910 131 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 Y_RNA.721-201ENST00000517207 102 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 IGLVI-20-201ENST00000519296 130 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 AC131281.1-201ENST00000522984 164 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 MIR2681-201ENST00000581814 105 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 AC044792.1-201ENST00000593294 196 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 MIR6718-201ENST00000616153 80 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 MIR5087-201ENST00000635826 76 ntBASIC0.5□□□□□ -2.33
COL5A3P25940 Y_RNA.183-201ENST00000363882 113 ntBASIC0.49□□□□□ -2.33
COL5A3P25940 Y_RNA.253-201ENST00000364562 112 ntBASIC0.49□□□□□ -2.33
COL5A3P25940 RNU6-450P-201ENST00000364654 107 ntBASIC0.49□□□□□ -2.33
COL5A3P25940 Y_RNA.455-201ENST00000384230 98 ntBASIC0.49□□□□□ -2.33
COL5A3P25940 SNORD38C-201ENST00000384381 69 ntBASIC0.49□□□□□ -2.33
COL5A3P25940 Y_RNA.541-201ENST00000384640 113 ntBASIC0.49□□□□□ -2.33
COL5A3P25940 MIR608-201ENST00000384820 100 ntBASIC0.49□□□□□ -2.33
COL5A3P25940 RNU6-383P-201ENST00000410864 94 ntBASIC0.49□□□□□ -2.33
COL5A3P25940 MTCO1P5-201ENST00000433573 344 ntBASIC0.49□□□□□ -2.33
COL5A3P25940 AC100767.1-201ENST00000528178 123 ntBASIC0.49□□□□□ -2.33
COL5A3P25940 AP003733.2-201ENST00000529409 171 ntBASIC0.49□□□□□ -2.33
COL5A3P25940 RPL23AP91-201ENST00000569211 455 ntBASIC0.49□□□□□ -2.33
COL5A3P25940 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.49□□□□□ -2.33
COL5A3P25940 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.49□□□□□ -2.33
COL5A3P25940 snoU2_19.2-201ENST00000363024 80 ntBASIC0.48□□□□□ -2.33
COL5A3P25940 RNU6-1227P-201ENST00000383981 107 ntBASIC0.48□□□□□ -2.33
COL5A3P25940 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.48□□□□□ -2.33
COL5A3P25940 snoU13.25-201ENST00000458945 104 ntBASIC0.48□□□□□ -2.33
COL5A3P25940 RNU6-437P-201ENST00000459408 95 ntBASIC0.48□□□□□ -2.33
COL5A3P25940 SNORA31.2-201ENST00000516019 134 ntBASIC0.48□□□□□ -2.33
COL5A3P25940 SNORA27.4-201ENST00000516650 95 ntBASIC0.48□□□□□ -2.33
COL5A3P25940 AC090142.3-201ENST00000519012 385 ntBASIC0.48□□□□□ -2.33
COL5A3P25940 AC113195.1-201ENST00000579952 141 ntBASIC0.48□□□□□ -2.33
COL5A3P25940 MIR4764-201ENST00000580680 88 ntBASIC0.48□□□□□ -2.33
COL5A3P25940 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.48□□□□□ -2.33
COL5A3P25940 AC120024.3-201ENST00000603167 156 ntBASIC0.48□□□□□ -2.33
COL5A3P25940 RAC1P9-201ENST00000604990 392 ntBASIC0.48□□□□□ -2.33
COL5A3P25940 AC022140.2-201ENST00000623500 188 ntBASIC0.48□□□□□ -2.33
COL5A3P25940 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.48□□□□□ -2.33
COL5A3P25940 Y_RNA.11-201ENST00000362375 109 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 Y_RNA.202-201ENST00000364083 110 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 Y_RNA.210-201ENST00000364161 110 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 Y_RNA.286-201ENST00000364813 102 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 Y_RNA.336-201ENST00000365307 109 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 Y_RNA.363-201ENST00000365529 113 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 MIR200A-201ENST00000384875 90 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 RNU6-1109P-201ENST00000391187 107 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 SNORA26.5-201ENST00000391215 123 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.47□□□□□ -2.33
COL5A3P25940 MTCO2P12-201ENST00000427426 682 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 Y_RNA.637-201ENST00000459424 114 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 SNORD79.1-201ENST00000516069 84 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 ACA64.5-201ENST00000516207 127 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 SCARNA24.2-201ENST00000516968 130 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.47□□□□□ -2.33
COL5A3P25940 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 snoU18.1-201ENST00000629629 71 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 SNORA9.1-201ENST00000362412 131 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 Y_RNA.19-201ENST00000362462 99 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 Y_RNA.105-201ENST00000363182 111 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 RNU4-80P-201ENST00000363200 141 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 SNORA25.3-201ENST00000363205 127 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 RNU6-1209P-201ENST00000363655 107 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 Y_RNA.380-201ENST00000365663 111 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 SNORA72.4-201ENST00000384174 132 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 MTCO2P33-201ENST00000402100 465 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 AL731563.1-201ENST00000442202 214 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 RN7SKP164-201ENST00000516138 266 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 Y_RNA.711-201ENST00000516993 102 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 AC109810.1-201ENST00000534066 224 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 MIR4300-201ENST00000581016 96 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 AL356055.1-201ENST00000602528 446 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 MTRNR2L2-201ENST00000604882 87 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 AC004832.4-201ENST00000608952 331 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 AC106800.4-201ENST00000614905 153 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 MIR548AY-201ENST00000617669 107 ntBASIC0.47□□□□□ -2.33
COL5A3P25940 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.46□□□□□ -2.34
COL5A3P25940 Y_RNA.84-201ENST00000363011 104 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 RNU6-238P-201ENST00000363313 106 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 RNU6-899P-201ENST00000363947 107 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 Y_RNA.330-201ENST00000365230 109 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 Y_RNA.569-201ENST00000384749 103 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 MT-TT-201ENST00000387460 66 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 RNU6-763P-201ENST00000390865 106 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 Y_RNA.581-201ENST00000391017 97 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 U8.17-201ENST00000391292 132 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 AL590004.1-201ENST00000405321 300 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 MTCYBP6-201ENST00000441810 138 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 RNU7-90P-201ENST00000459216 62 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 SNORD124-201ENST00000459577 104 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 SERF1AP1-201ENST00000514575 187 ntBASIC0.46□□□□□ -2.34
COL5A3P25940 RNU4-57P-201ENST00000515980 135 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms