| YY1 | P25490 | ATP11C-202 | ENST00000361648 | 6010 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-682P-201 | ENST00000363843 | 106 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | Y_RNA.308-201 | ENST00000365043 | 101 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-484P-201 | ENST00000384016 | 107 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | Y_RNA.571-201 | ENST00000384753 | 98 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-1228P-201 | ENST00000391014 | 107 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | PCNPP3-201 | ENST00000393579 | 471 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | AL034345.1-201 | ENST00000407768 | 123 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | AC233266.1-201 | ENST00000454518 | 96 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-453P-201 | ENST00000516819 | 85 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | MIR4419B-201 | ENST00000577260 | 68 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | AC072026.1-201 | ENST00000605023 | 201 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | AC242852.1-201 | ENST00000612151 | 96 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | uc_338.4-201 | ENST00000616635 | 176 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | AC244015.1-201 | ENST00000622301 | 99 nt | BASIC | 1.87 | □□□□□ -2.11 | | |
| YY1 | P25490 | MIR424-201 | ENST00000362227 | 98 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | Y_RNA.240-201 | ENST00000364469 | 95 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-203P-201 | ENST00000384038 | 104 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | MIR222-201 | ENST00000384992 | 110 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | MIR548I3-201 | ENST00000408378 | 149 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | MIR548I1-201 | ENST00000408810 | 149 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | AL590705.2-201 | ENST00000420204 | 281 nt | TSL 5 BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | SNRPGP10-201 | ENST00000432323 | 225 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | LINC01073-201 | ENST00000441659 | 149 nt | TSL 3 BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | STAG3L5P-204 | ENST00000443759 | 179 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | AC097716.1-201 | ENST00000509136 | 180 nt | TSL 2 BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | RPL23AP91-201 | ENST00000569211 | 455 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | MIR4709-201 | ENST00000577272 | 72 nt | BASIC | 1.86 | □□□□□ -2.11 | | |
| YY1 | P25490 | MBNL3-212 | ENST00000538204 | 11294 nt | TSL 1 (best) BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | MIR302D-201 | ENST00000362275 | 68 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-1123P-201 | ENST00000362347 | 106 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-833P-201 | ENST00000363486 | 107 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-1020P-201 | ENST00000363684 | 107 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | Y_RNA.233-201 | ENST00000364407 | 101 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-997P-201 | ENST00000384725 | 107 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-493P-201 | ENST00000391321 | 108 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | JTBP1-201 | ENST00000441314 | 247 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | AC122707.1-201 | ENST00000502882 | 219 nt | TSL 2 BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | MRPS18CP4-201 | ENST00000535821 | 231 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | MIR4744-201 | ENST00000581563 | 82 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | MIR3668-201 | ENST00000582138 | 75 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | AC108706.1-201 | ENST00000611053 | 297 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | U6.106-201 | ENST00000636360 | 105 nt | BASIC | 1.85 | □□□□□ -2.11 | | |
| YY1 | P25490 | MIR126-201 | ENST00000362291 | 85 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | Y_RNA.258-201 | ENST00000364613 | 105 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-923P-201 | ENST00000364753 | 107 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-275P-201 | ENST00000364910 | 107 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | SNORD50B-201 | ENST00000364995 | 70 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | MIR660-201 | ENST00000385235 | 97 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNU6-578P-201 | ENST00000390980 | 103 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | U8.16-201 | ENST00000391279 | 133 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | CALM2P4-201 | ENST00000430810 | 426 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | AL353747.2-201 | ENST00000439207 | 205 nt | TSL 3 BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | PGBD4P5-201 | ENST00000445958 | 426 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | RNA5SP168-201 | ENST00000516642 | 112 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | AC098479.1-201 | ENST00000609225 | 154 nt | BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | FANCD2-213 | ENST00000625535 | 117 nt | TSL 5 BASIC | 1.84 | □□□□□ -2.11 | | |
| YY1 | P25490 | AC008781.2-201 | ENST00000502205 | 2480 nt | TSL 1 (best) BASIC | 1.83 | □□□□□ -2.12 | | |
| YY1 | P25490 | Y_RNA.441-201 | ENST00000384123 | 112 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| YY1 | P25490 | Y_RNA.555-201 | ENST00000384673 | 110 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| YY1 | P25490 | MT-TT-201 | ENST00000387460 | 66 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| YY1 | P25490 | SNRPGP8-201 | ENST00000454064 | 226 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| YY1 | P25490 | CYCTP-201 | ENST00000504253 | 315 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| YY1 | P25490 | AC024614.2-201 | ENST00000577584 | 372 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| YY1 | P25490 | AC015688.6-201 | ENST00000577737 | 104 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| YY1 | P25490 | AL020996.3-201 | ENST00000606617 | 222 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| YY1 | P25490 | AC006441.5-201 | ENST00000612680 | 209 nt | BASIC | 1.83 | □□□□□ -2.12 | | |
| YY1 | P25490 | Y_RNA.23-201 | ENST00000362496 | 106 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | Y_RNA.265-201 | ENST00000364677 | 108 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | Y_RNA.336-201 | ENST00000365307 | 109 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | Y_RNA.412-201 | ENST00000384001 | 104 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | RNU6-439P-201 | ENST00000384188 | 106 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | RNU2-7P-201 | ENST00000410794 | 178 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | ATP6V0E1P3-201 | ENST00000420036 | 246 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | RNA5SP153-201 | ENST00000516498 | 76 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | AP003097.2-201 | ENST00000530126 | 178 nt | TSL 3 BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | AC109810.1-201 | ENST00000534066 | 224 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | LINC02277-202 | ENST00000556472 | 453 nt | TSL 3 BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | AC138625.2-201 | ENST00000563968 | 551 nt | TSL 3 BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | MIR4662B-201 | ENST00000579498 | 81 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | AC120024.3-201 | ENST00000603167 | 156 nt | BASIC | 1.82 | □□□□□ -2.12 | | |
| YY1 | P25490 | ZNF654-201 | ENST00000309495 | 4957 nt | APPRIS P2 TSL 1 (best) BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | RNU6-312P-201 | ENST00000364629 | 107 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | SNORD72-201 | ENST00000390994 | 80 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | RNU6-131P-201 | ENST00000391144 | 107 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | Y_RNA.587-201 | ENST00000391210 | 103 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | AL606845.1-201 | ENST00000404881 | 255 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | RNA5SP127-201 | ENST00000411051 | 133 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | Y_RNA.793-201 | ENST00000411222 | 111 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | RPL23AP6-201 | ENST00000446637 | 472 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | AL353742.1-201 | ENST00000453455 | 224 nt | TSL 3 BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | RNU6-1219P-201 | ENST00000516143 | 112 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | RNU6-970P-201 | ENST00000516312 | 107 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | RNU6-126P-201 | ENST00000516685 | 103 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | RNU6-182P-201 | ENST00000516970 | 105 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | AC022559.1-201 | ENST00000520905 | 205 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | AP002392.1-201 | ENST00000537692 | 208 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | JPX_2.1-201 | ENST00000614161 | 69 nt | BASIC | 1.81 | □□□□□ -2.12 | | |
| YY1 | P25490 | Y_RNA.66-201 | ENST00000362862 | 102 nt | BASIC | 1.8 | □□□□□ -2.12 | | |
| YY1 | P25490 | Y_RNA.621-201 | ENST00000411065 | 96 nt | BASIC | 1.8 | □□□□□ -2.12 | | |