Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 SNORD115-42-201ENST00000364273 82 ntBASIC0.58□□□□□ -2.32
BDNFP23560 SNORD115-15-201ENST00000364809 81 ntBASIC0.58□□□□□ -2.32
BDNFP23560 SNORD115-1-201ENST00000364961 82 ntBASIC0.58□□□□□ -2.32
BDNFP23560 SNORD115-26-201ENST00000365067 82 ntBASIC0.58□□□□□ -2.32
BDNFP23560 SNORD115-10-201ENST00000365073 81 ntBASIC0.58□□□□□ -2.32
BDNFP23560 RNU6-1283P-201ENST00000365314 105 ntBASIC0.58□□□□□ -2.32
BDNFP23560 SNORD115-43-201ENST00000365503 82 ntBASIC0.58□□□□□ -2.32
BDNFP23560 SNORD115-36-201ENST00000365629 82 ntBASIC0.58□□□□□ -2.32
BDNFP23560 MIR520F-201ENST00000384824 87 ntBASIC0.58□□□□□ -2.32
BDNFP23560 MIR7-2-201ENST00000384970 110 ntBASIC0.58□□□□□ -2.32
BDNFP23560 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
BDNFP23560 MIR140-201ENST00000385282 100 ntBASIC0.58□□□□□ -2.32
BDNFP23560 MIR548O-201ENST00000408583 114 ntBASIC0.58□□□□□ -2.32
BDNFP23560 RNU6-177P-201ENST00000411257 104 ntBASIC0.58□□□□□ -2.32
BDNFP23560 AC087499.4-201ENST00000448505 178 ntBASIC0.58□□□□□ -2.32
BDNFP23560 SNORD115-40-201ENST00000606510 82 ntBASIC0.58□□□□□ -2.32
BDNFP23560 AC037487.3-201ENST00000606668 112 ntBASIC0.58□□□□□ -2.32
BDNFP23560 MIR376A1-201ENST00000616574 68 ntBASIC0.58□□□□□ -2.32
BDNFP23560 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.58□□□□□ -2.32
BDNFP23560 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.57□□□□□ -2.32
BDNFP23560 Y_RNA.445-201ENST00000384168 102 ntBASIC0.57□□□□□ -2.32
BDNFP23560 Y_RNA.529-201ENST00000384586 119 ntBASIC0.57□□□□□ -2.32
BDNFP23560 MT-TD-201ENST00000387419 68 ntBASIC0.57□□□□□ -2.32
BDNFP23560 MIR936-201ENST00000401264 98 ntBASIC0.57□□□□□ -2.32
BDNFP23560 RNU2-14P-201ENST00000411053 191 ntBASIC0.57□□□□□ -2.32
BDNFP23560 RNU7-67P-201ENST00000459003 62 ntBASIC0.57□□□□□ -2.32
BDNFP23560 AC134878.1-201ENST00000619901 243 ntBASIC0.57□□□□□ -2.32
BDNFP23560 MIR367-201ENST00000362299 68 ntBASIC0.56□□□□□ -2.32
BDNFP23560 SNORD113-8-201ENST00000363497 74 ntBASIC0.56□□□□□ -2.32
BDNFP23560 MIR520H-201ENST00000385126 88 ntBASIC0.56□□□□□ -2.32
BDNFP23560 SNORA26.5-201ENST00000391215 123 ntBASIC0.56□□□□□ -2.32
BDNFP23560 AC092628.1-201ENST00000436250 252 ntBASIC0.56□□□□□ -2.32
BDNFP23560 RNU6-229P-201ENST00000516614 102 ntBASIC0.56□□□□□ -2.32
BDNFP23560 C8orf59P2-201ENST00000603441 271 ntBASIC0.56□□□□□ -2.32
BDNFP23560 AC090574.1-201ENST00000623186 233 ntBASIC0.56□□□□□ -2.32
BDNFP23560 AC022140.2-201ENST00000623500 188 ntBASIC0.56□□□□□ -2.32
BDNFP23560 Y_RNA.241-201ENST00000364470 117 ntBASIC0.55□□□□□ -2.32
BDNFP23560 RNU6-1138P-201ENST00000365359 106 ntBASIC0.55□□□□□ -2.32
BDNFP23560 Y_RNA.393-201ENST00000383936 102 ntBASIC0.55□□□□□ -2.32
BDNFP23560 Y_RNA.547-201ENST00000384654 119 ntBASIC0.55□□□□□ -2.32
BDNFP23560 Y_RNA.569-201ENST00000384749 103 ntBASIC0.55□□□□□ -2.32
BDNFP23560 Y_RNA.702-201ENST00000516843 96 ntBASIC0.55□□□□□ -2.32
BDNFP23560 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
BDNFP23560 Y_RNA.80-201ENST00000362996 102 ntBASIC0.54□□□□□ -2.32
BDNFP23560 Y_RNA.183-201ENST00000363882 113 ntBASIC0.54□□□□□ -2.32
BDNFP23560 Y_RNA.431-201ENST00000384086 102 ntBASIC0.54□□□□□ -2.32
BDNFP23560 SNORA24-201ENST00000384096 131 ntBASIC0.54□□□□□ -2.32
BDNFP23560 Y_RNA.485-201ENST00000384395 102 ntBASIC0.54□□□□□ -2.32
BDNFP23560 RNU6-205P-201ENST00000390858 107 ntBASIC0.54□□□□□ -2.32
BDNFP23560 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
BDNFP23560 RNU7-25P-201ENST00000516544 62 ntBASIC0.54□□□□□ -2.32
BDNFP23560 RNU7-53P-201ENST00000516705 60 ntBASIC0.54□□□□□ -2.32
BDNFP23560 RNU7-149P-201ENST00000516739 59 ntBASIC0.54□□□□□ -2.32
BDNFP23560 MIR4771-2-201ENST00000577758 74 ntBASIC0.54□□□□□ -2.32
BDNFP23560 MIR4771-1-201ENST00000582617 74 ntBASIC0.54□□□□□ -2.32
BDNFP23560 RN7SL793P-201ENST00000583259 296 ntBASIC0.54□□□□□ -2.32
BDNFP23560 RNU6-514P-201ENST00000384208 107 ntBASIC0.53□□□□□ -2.32
BDNFP23560 SNORD38B-201ENST00000384690 67 ntBASIC0.53□□□□□ -2.32
BDNFP23560 MIR216A-201ENST00000385063 110 ntBASIC0.53□□□□□ -2.32
BDNFP23560 RNU6-308P-201ENST00000390957 107 ntBASIC0.53□□□□□ -2.32
BDNFP23560 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.53□□□□□ -2.32
BDNFP23560 RNA5SP193-201ENST00000410353 107 ntBASIC0.53□□□□□ -2.32
BDNFP23560 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.53□□□□□ -2.32
BDNFP23560 RNU7-62P-201ENST00000458856 62 ntBASIC0.53□□□□□ -2.32
BDNFP23560 MIR4724-201ENST00000579485 89 ntBASIC0.53□□□□□ -2.32
BDNFP23560 SNORD38B-202ENST00000625943 69 ntBASIC0.53□□□□□ -2.32
BDNFP23560 Y_RNA.286-201ENST00000364813 102 ntBASIC0.52□□□□□ -2.33
BDNFP23560 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.52□□□□□ -2.33
BDNFP23560 MTND3P22-201ENST00000510932 243 ntBASIC0.52□□□□□ -2.33
BDNFP23560 RNU6-764P-201ENST00000516396 105 ntBASIC0.52□□□□□ -2.33
BDNFP23560 MIR4711-201ENST00000578274 70 ntBASIC0.52□□□□□ -2.33
BDNFP23560 AC013791.1-201ENST00000616619 62 ntBASIC0.52□□□□□ -2.33
BDNFP23560 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
BDNFP23560 AC090625.1-201ENST00000357130 210 ntBASIC0.51□□□□□ -2.33
BDNFP23560 SNORD115-28-201ENST00000363931 81 ntBASIC0.51□□□□□ -2.33
BDNFP23560 RNU6-763P-201ENST00000390865 106 ntBASIC0.51□□□□□ -2.33
BDNFP23560 Y_RNA.579-201ENST00000390939 94 ntBASIC0.51□□□□□ -2.33
BDNFP23560 SNORA53-201ENST00000391141 249 ntBASIC0.51□□□□□ -2.33
BDNFP23560 Y_RNA.721-201ENST00000517207 102 ntBASIC0.51□□□□□ -2.33
BDNFP23560 AC124312.5-201ENST00000604451 268 ntBASIC0.51□□□□□ -2.33
BDNFP23560 PART1_1.1-201ENST00000611761 217 ntBASIC0.51□□□□□ -2.33
BDNFP23560 AC090971.5-201ENST00000621102 293 ntBASIC0.51□□□□□ -2.33
BDNFP23560 AC112487.2-201ENST00000637950 304 ntBASIC0.51□□□□□ -2.33
BDNFP23560 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
BDNFP23560 SNORD45.3-201ENST00000363836 72 ntBASIC0.5□□□□□ -2.33
BDNFP23560 Y_RNA.418-201ENST00000384029 102 ntBASIC0.5□□□□□ -2.33
BDNFP23560 RNU6-125P-201ENST00000384505 107 ntBASIC0.5□□□□□ -2.33
BDNFP23560 SNORA40.5-201ENST00000391061 128 ntBASIC0.5□□□□□ -2.33
BDNFP23560 Y_RNA.602-201ENST00000410535 92 ntBASIC0.5□□□□□ -2.33
BDNFP23560 RNU6-130P-201ENST00000411112 103 ntBASIC0.5□□□□□ -2.33
BDNFP23560 SNORD83.1-201ENST00000411362 77 ntBASIC0.5□□□□□ -2.33
BDNFP23560 AC114737.2-201ENST00000421583 173 ntBASIC0.5□□□□□ -2.33
BDNFP23560 MIR18B-201ENST00000454574 71 ntBASIC0.5□□□□□ -2.33
BDNFP23560 RNU7-73P-201ENST00000458743 63 ntBASIC0.5□□□□□ -2.33
BDNFP23560 RNU6-496P-201ENST00000516145 99 ntBASIC0.5□□□□□ -2.33
BDNFP23560 MIR5688-201ENST00000580619 83 ntBASIC0.5□□□□□ -2.33
BDNFP23560 MIR548S-201ENST00000581352 82 ntBASIC0.5□□□□□ -2.33
BDNFP23560 MIR6779-201ENST00000617283 64 ntBASIC0.5□□□□□ -2.33
BDNFP23560 Y_RNA.303-201ENST00000364998 94 ntBASIC0.49□□□□□ -2.33
BDNFP23560 AC022028.1-201ENST00000412054 408 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 386.3 ms