Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SNORD61-201ENST00000384252 73 ntBASIC1.46□□□□□ -2.18
TNFSF4P23510 AL591806.2-201ENST00000433122 173 ntBASIC1.46□□□□□ -2.18
TNFSF4P23510 AC107297.1-201ENST00000459991 176 ntBASIC1.46□□□□□ -2.18
TNFSF4P23510 AC048334.1-201ENST00000477975 159 ntBASIC1.46□□□□□ -2.18
TNFSF4P23510 RNU7-181P-201ENST00000517234 74 ntBASIC1.46□□□□□ -2.18
TNFSF4P23510 AC109810.1-201ENST00000534066 224 ntBASIC1.46□□□□□ -2.18
TNFSF4P23510 MIR4308-201ENST00000580634 81 ntBASIC1.46□□□□□ -2.18
TNFSF4P23510 AC108706.1-201ENST00000611053 297 ntBASIC1.46□□□□□ -2.18
TNFSF4P23510 Y_RNA.91-201ENST00000363042 107 ntBASIC1.45□□□□□ -2.18
TNFSF4P23510 Y_RNA.435-201ENST00000384095 112 ntBASIC1.45□□□□□ -2.18
TNFSF4P23510 Y_RNA.537-201ENST00000384626 109 ntBASIC1.45□□□□□ -2.18
TNFSF4P23510 MIR518F-201ENST00000384973 87 ntBASIC1.45□□□□□ -2.18
TNFSF4P23510 SNORD28B-201ENST00000390993 75 ntBASIC1.45□□□□□ -2.18
TNFSF4P23510 AL121914.1-201ENST00000450188 156 ntBASIC1.45□□□□□ -2.18
TNFSF4P23510 snoU13.23-201ENST00000458863 104 ntBASIC1.45□□□□□ -2.18
TNFSF4P23510 RNU7-41P-201ENST00000515917 61 ntBASIC1.45□□□□□ -2.18
TNFSF4P23510 RNU6-1270P-201ENST00000517128 108 ntBASIC1.45□□□□□ -2.18
TNFSF4P23510 AC007751.1-201ENST00000529260 376 ntBASIC1.45□□□□□ -2.18
TNFSF4P23510 AC134878.1-201ENST00000619901 243 ntBASIC1.45□□□□□ -2.18
TNFSF4P23510 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.45□□□□□ -2.18
TNFSF4P23510 SNORD115-34-201ENST00000362441 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-12-201ENST00000362583 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-29-201ENST00000362834 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-9-201ENST00000362912 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-21-201ENST00000362963 81 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-14-201ENST00000363090 81 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-13-201ENST00000363358 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-41-201ENST00000363608 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-11-201ENST00000363616 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-5-201ENST00000363633 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 RNU6-1020P-201ENST00000363684 107 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-39-201ENST00000363694 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-4-201ENST00000363810 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-16-201ENST00000363887 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-6-201ENST00000363942 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-42-201ENST00000364273 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-15-201ENST00000364809 81 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-1-201ENST00000364961 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-26-201ENST00000365067 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-10-201ENST00000365073 81 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-43-201ENST00000365503 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-36-201ENST00000365629 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 MIR548A2-201ENST00000384956 97 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 RNU6-847P-201ENST00000411115 108 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 RPS29P11-201ENST00000496507 171 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 AC130289.1-201ENST00000577321 73 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 SNORD115-40-201ENST00000606510 82 ntBASIC1.44□□□□□ -2.18
TNFSF4P23510 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TNFSF4P23510 RNA5SP327-201ENST00000362494 101 ntBASIC1.43□□□□□ -2.18
TNFSF4P23510 Y_RNA.182-201ENST00000363880 111 ntBASIC1.43□□□□□ -2.18
TNFSF4P23510 AL627390.1-201ENST00000396055 340 ntBASIC1.43□□□□□ -2.18
TNFSF4P23510 RNU6-561P-201ENST00000516222 102 ntBASIC1.43□□□□□ -2.18
TNFSF4P23510 RNU6-388P-201ENST00000517012 105 ntBASIC1.43□□□□□ -2.18
TNFSF4P23510 RNU6-389P-201ENST00000517048 105 ntBASIC1.43□□□□□ -2.18
TNFSF4P23510 SNORA70.22-201ENST00000517160 124 ntBASIC1.43□□□□□ -2.18
TNFSF4P23510 MIR8081-201ENST00000611533 95 ntBASIC1.43□□□□□ -2.18
TNFSF4P23510 MIR4251-201ENST00000635819 61 ntBASIC1.43□□□□□ -2.18
TNFSF4P23510 Y_RNA.37-201ENST00000362606 108 ntBASIC1.42□□□□□ -2.18
TNFSF4P23510 RNU6-275P-201ENST00000364910 107 ntBASIC1.42□□□□□ -2.18
TNFSF4P23510 SNORA70.7-201ENST00000384159 133 ntBASIC1.42□□□□□ -2.18
TNFSF4P23510 SNORA25-201ENST00000384384 134 ntBASIC1.42□□□□□ -2.18
TNFSF4P23510 SNORA51.10-201ENST00000384418 136 ntBASIC1.42□□□□□ -2.18
TNFSF4P23510 RNU6-918P-201ENST00000391219 106 ntBASIC1.42□□□□□ -2.18
TNFSF4P23510 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.42□□□□□ -2.18
TNFSF4P23510 MIR3683-201ENST00000580847 82 ntBASIC1.42□□□□□ -2.18
TNFSF4P23510 AL022345.2-201ENST00000606307 135 ntBASIC1.42□□□□□ -2.18
TNFSF4P23510 AC078938.1-201ENST00000620993 318 ntBASIC1.42□□□□□ -2.18
TNFSF4P23510 AP000648.3-201ENST00000623539 4507 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 MIR26B-201ENST00000362251 77 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 Y_RNA.75-201ENST00000362927 97 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 RNA5SP264-201ENST00000363115 107 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 Y_RNA.241-201ENST00000364470 117 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 SNORA25.8-201ENST00000364831 128 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 RNA5SP190-201ENST00000365222 118 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 Y_RNA.410-201ENST00000383992 113 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
TNFSF4P23510 RNU6-910P-201ENST00000390844 107 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 SNORD12-201ENST00000391002 90 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 SNORA40.5-201ENST00000391061 128 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.41□□□□□ -2.18
TNFSF4P23510 RNU2-13P-201ENST00000515909 113 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.41□□□□□ -2.18
TNFSF4P23510 AP003484.1-201ENST00000530974 250 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.41□□□□□ -2.18
TNFSF4P23510 AC019288.1-201ENST00000557918 224 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 SNORD53B-201ENST00000577887 78 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 MIR4255-201ENST00000579351 72 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 MIR4524B-201ENST00000581569 115 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 PRELID3BP2-201ENST00000605362 201 ntBASIC1.41□□□□□ -2.18
TNFSF4P23510 RNA5SP363-201ENST00000365072 115 ntBASIC1.4□□□□□ -2.19
TNFSF4P23510 Y_RNA.542-201ENST00000384641 111 ntBASIC1.4□□□□□ -2.19
TNFSF4P23510 MIR222-201ENST00000384992 110 ntBASIC1.4□□□□□ -2.19
TNFSF4P23510 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TNFSF4P23510 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
TNFSF4P23510 snoU13.25-201ENST00000458945 104 ntBASIC1.4□□□□□ -2.19
TNFSF4P23510 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.4□□□□□ -2.19
TNFSF4P23510 AC015712.3-201ENST00000559380 164 ntBASIC1.4□□□□□ -2.19
TNFSF4P23510 MIR4791-201ENST00000607666 84 ntBASIC1.4□□□□□ -2.19
TNFSF4P23510 AL353997.5-201ENST00000618886 171 ntBASIC1.4□□□□□ -2.19
TNFSF4P23510 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms