Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.72□□□□□ -1.81
PTPREP23469 AC012676.2-201ENST00000619258 186 ntBASIC3.72□□□□□ -1.81
PTPREP23469 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
PTPREP23469 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPREP23469 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.72□□□□□ -1.81
PTPREP23469 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
PTPREP23469 AL021368.2-201ENST00000606125 5352 ntBASIC3.71□□□□□ -1.82
PTPREP23469 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
PTPREP23469 RNU6-833P-201ENST00000363486 107 ntBASIC3.71□□□□□ -1.82
PTPREP23469 RNA5SP293-201ENST00000410527 113 ntBASIC3.71□□□□□ -1.82
PTPREP23469 AC245047.7-201ENST00000440265 293 ntBASIC3.71□□□□□ -1.82
PTPREP23469 AC087499.7-201ENST00000441958 109 ntBASIC3.71□□□□□ -1.82
PTPREP23469 RNU7-73P-201ENST00000458743 63 ntBASIC3.71□□□□□ -1.82
PTPREP23469 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.71□□□□□ -1.82
PTPREP23469 RNU6-917P-201ENST00000516294 104 ntBASIC3.71□□□□□ -1.82
PTPREP23469 SNORD67.1-201ENST00000516618 108 ntBASIC3.71□□□□□ -1.82
PTPREP23469 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.71□□□□□ -1.82
PTPREP23469 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.71□□□□□ -1.82
PTPREP23469 AL365361.1-201ENST00000566942 3481 ntBASIC3.71□□□□□ -1.82
PTPREP23469 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.7□□□□□ -1.82
PTPREP23469 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.7□□□□□ -1.82
PTPREP23469 RNA5SP383-201ENST00000362934 120 ntBASIC3.7□□□□□ -1.82
PTPREP23469 Y_RNA.168-201ENST00000363740 102 ntBASIC3.7□□□□□ -1.82
PTPREP23469 RNA5SP138-201ENST00000365098 114 ntBASIC3.7□□□□□ -1.82
PTPREP23469 RNU6-805P-201ENST00000365643 106 ntBASIC3.7□□□□□ -1.82
PTPREP23469 U8.16-201ENST00000391279 133 ntBASIC3.7□□□□□ -1.82
PTPREP23469 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC3.7□□□□□ -1.82
PTPREP23469 AC023141.11-201ENST00000508864 202 ntBASIC3.7□□□□□ -1.82
PTPREP23469 AC008885.1-201ENST00000514930 301 ntBASIC3.7□□□□□ -1.82
PTPREP23469 RNU6-711P-201ENST00000517255 106 ntBASIC3.7□□□□□ -1.82
PTPREP23469 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.7□□□□□ -1.82
PTPREP23469 MIR2682-201ENST00000580305 110 ntBASIC3.7□□□□□ -1.82
PTPREP23469 MIR7106-201ENST00000612419 65 ntBASIC3.7□□□□□ -1.82
PTPREP23469 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.7□□□□□ -1.82
PTPREP23469 AL137790.1-201ENST00000634283 177 ntBASIC3.7□□□□□ -1.82
PTPREP23469 MIR7153-201ENST00000637758 57 ntBASIC3.7□□□□□ -1.82
PTPREP23469 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PTPREP23469 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
PTPREP23469 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTPREP23469 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTPREP23469 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PTPREP23469 RNU6-624P-201ENST00000363411 107 ntBASIC3.69□□□□□ -1.82
PTPREP23469 SNORA7.4-201ENST00000384249 137 ntBASIC3.69□□□□□ -1.82
PTPREP23469 RNU6-480P-201ENST00000384332 107 ntBASIC3.69□□□□□ -1.82
PTPREP23469 RNU6-1321P-201ENST00000390905 107 ntBASIC3.69□□□□□ -1.82
PTPREP23469 HMGN1P33-201ENST00000432945 451 ntBASIC3.69□□□□□ -1.82
PTPREP23469 SCARNA18B-201ENST00000458806 135 ntBASIC3.69□□□□□ -1.82
PTPREP23469 SNORA31.10-201ENST00000516482 106 ntBASIC3.69□□□□□ -1.82
PTPREP23469 AC091152.2-201ENST00000591628 2569 ntBASIC3.69□□□□□ -1.82
PTPREP23469 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PTPREP23469 RNU4-32P-201ENST00000363404 141 ntBASIC3.68□□□□□ -1.82
PTPREP23469 SEM1P1-201ENST00000506694 209 ntBASIC3.68□□□□□ -1.82
PTPREP23469 AC234781.5-201ENST00000508429 271 ntBASIC3.68□□□□□ -1.82
PTPREP23469 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC3.68□□□□□ -1.82
PTPREP23469 MTND5P40-201ENST00000559945 246 ntBASIC3.68□□□□□ -1.82
PTPREP23469 UBL5P2-201ENST00000583788 219 ntBASIC3.68□□□□□ -1.82
PTPREP23469 FAM106DP-201ENST00000586416 501 ntBASIC3.68□□□□□ -1.82
PTPREP23469 AC105081.1-201ENST00000617727 106 ntBASIC3.68□□□□□ -1.82
PTPREP23469 AC243994.1-201ENST00000618627 109 ntBASIC3.68□□□□□ -1.82
PTPREP23469 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPREP23469 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.68□□□□□ -1.82
PTPREP23469 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTPREP23469 RNA5SP493-201ENST00000364115 91 ntBASIC3.67□□□□□ -1.82
PTPREP23469 SNORD38.2-201ENST00000384470 69 ntBASIC3.67□□□□□ -1.82
PTPREP23469 SNORA2B-201ENST00000384583 137 ntBASIC3.67□□□□□ -1.82
PTPREP23469 SNORA40.18-201ENST00000391200 128 ntBASIC3.67□□□□□ -1.82
PTPREP23469 MIR1262-201ENST00000408276 93 ntBASIC3.67□□□□□ -1.82
PTPREP23469 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.67□□□□□ -1.82
PTPREP23469 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
PTPREP23469 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.66□□□□□ -1.82
PTPREP23469 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPREP23469 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.66□□□□□ -1.82
PTPREP23469 SNORA25B-201ENST00000365507 128 ntBASIC3.66□□□□□ -1.82
PTPREP23469 RNU6-411P-201ENST00000384451 107 ntBASIC3.66□□□□□ -1.82
PTPREP23469 RNU6-1086P-201ENST00000410930 100 ntBASIC3.66□□□□□ -1.82
PTPREP23469 RNA5SP217-201ENST00000515959 91 ntBASIC3.66□□□□□ -1.82
PTPREP23469 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.66□□□□□ -1.82
PTPREP23469 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTPREP23469 SNORA5B-201ENST00000363786 132 ntBASIC3.65□□□□□ -1.83
PTPREP23469 SNORD28B-201ENST00000390993 75 ntBASIC3.65□□□□□ -1.83
PTPREP23469 RNU7-12P-201ENST00000516030 62 ntBASIC3.65□□□□□ -1.83
PTPREP23469 RNU6-871P-201ENST00000516122 100 ntBASIC3.65□□□□□ -1.83
PTPREP23469 RNA5SP168-201ENST00000516642 112 ntBASIC3.65□□□□□ -1.83
PTPREP23469 AC008163.1-202ENST00000636004 2889 ntBASIC3.65□□□□□ -1.83
PTPREP23469 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTPREP23469 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.65□□□□□ -1.83
PTPREP23469 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTPREP23469 MIRLET7A1-201ENST00000362295 80 ntBASIC3.64□□□□□ -1.83
PTPREP23469 MIR136-201ENST00000385207 82 ntBASIC3.64□□□□□ -1.83
PTPREP23469 MIR1265-201ENST00000408444 86 ntBASIC3.64□□□□□ -1.83
PTPREP23469 RNU7-79P-201ENST00000516082 62 ntBASIC3.64□□□□□ -1.83
PTPREP23469 MIR3169-201ENST00000578032 83 ntBASIC3.64□□□□□ -1.83
PTPREP23469 MIR548AR-201ENST00000582191 57 ntBASIC3.64□□□□□ -1.83
PTPREP23469 MIR4672-201ENST00000583126 81 ntBASIC3.64□□□□□ -1.83
PTPREP23469 AC006023.1-201ENST00000603944 259 ntBASIC3.64□□□□□ -1.83
PTPREP23469 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPREP23469 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPREP23469 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
PTPREP23469 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PTPREP23469 SNORA68.1-201ENST00000364537 132 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms