Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 RNA5SP285-201ENST00000516619 119 ntBASIC0.09□□□□□ -2.4
USF1P22415 RNA5SP94-201ENST00000516917 108 ntBASIC0.09□□□□□ -2.4
USF1P22415 MIR5190-201ENST00000581537 80 ntBASIC0.09□□□□□ -2.4
USF1P22415 U6.90-201ENST00000614007 104 ntBASIC0.09□□□□□ -2.4
USF1P22415 U6.70-201ENST00000620287 104 ntBASIC0.09□□□□□ -2.4
USF1P22415 SNORD81.2-201ENST00000365153 76 ntBASIC0.08□□□□□ -2.4
USF1P22415 RNU6-364P-201ENST00000384387 107 ntBASIC0.08□□□□□ -2.4
USF1P22415 Y_RNA.547-201ENST00000384654 119 ntBASIC0.08□□□□□ -2.4
USF1P22415 SNORD38B-201ENST00000384690 67 ntBASIC0.08□□□□□ -2.4
USF1P22415 RNU6-1248P-201ENST00000391096 64 ntBASIC0.08□□□□□ -2.4
USF1P22415 FGF7P6-202ENST00000451282 293 ntBASIC0.08□□□□□ -2.4
USF1P22415 AC023449.1-201ENST00000454464 154 ntBASIC0.08□□□□□ -2.4
USF1P22415 RNU6-863P-201ENST00000515989 104 ntBASIC0.08□□□□□ -2.4
USF1P22415 RNU6-559P-201ENST00000516151 98 ntBASIC0.08□□□□□ -2.4
USF1P22415 RNU7-25P-201ENST00000516544 62 ntBASIC0.08□□□□□ -2.4
USF1P22415 RNU4-77P-201ENST00000516692 156 ntBASIC0.08□□□□□ -2.4
USF1P22415 RNU6-699P-201ENST00000517081 110 ntBASIC0.08□□□□□ -2.4
USF1P22415 MIR3145-201ENST00000580727 82 ntBASIC0.08□□□□□ -2.4
USF1P22415 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.08□□□□□ -2.4
USF1P22415 AC078938.1-201ENST00000620993 318 ntBASIC0.08□□□□□ -2.4
USF1P22415 SNORD38B-202ENST00000625943 69 ntBASIC0.08□□□□□ -2.4
USF1P22415 SNORD115-34-201ENST00000362441 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-12-201ENST00000362583 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-29-201ENST00000362834 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-9-201ENST00000362912 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-21-201ENST00000362963 81 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-14-201ENST00000363090 81 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-13-201ENST00000363358 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD118-201ENST00000363593 134 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-41-201ENST00000363608 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-11-201ENST00000363616 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-5-201ENST00000363633 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-39-201ENST00000363694 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-4-201ENST00000363810 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-16-201ENST00000363887 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-6-201ENST00000363942 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-42-201ENST00000364273 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-15-201ENST00000364809 81 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-1-201ENST00000364961 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-26-201ENST00000365067 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-10-201ENST00000365073 81 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-43-201ENST00000365503 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-36-201ENST00000365629 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORA72.4-201ENST00000384174 132 ntBASIC0.07□□□□□ -2.4
USF1P22415 MIR125B2-201ENST00000385128 89 ntBASIC0.07□□□□□ -2.4
USF1P22415 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
USF1P22415 AC005357.1-201ENST00000588399 301 ntBASIC0.07□□□□□ -2.4
USF1P22415 AC113139.1-201ENST00000605049 239 ntBASIC0.07□□□□□ -2.4
USF1P22415 SNORD115-40-201ENST00000606510 82 ntBASIC0.07□□□□□ -2.4
USF1P22415 AC067863.3-201ENST00000624172 122 ntBASIC0.07□□□□□ -2.4
USF1P22415 MIR4315-1-201ENST00000636800 73 ntBASIC0.07□□□□□ -2.4
USF1P22415 MIR4315-2-201ENST00000640925 73 ntBASIC0.07□□□□□ -2.4
USF1P22415 Y_RNA.241-201ENST00000364470 117 ntBASIC0.06□□□□□ -2.4
USF1P22415 SNORD63-201ENST00000384262 68 ntBASIC0.06□□□□□ -2.4
USF1P22415 Y_RNA.551-201ENST00000384661 102 ntBASIC0.06□□□□□ -2.4
USF1P22415 RNU6-21P-201ENST00000384710 107 ntBASIC0.06□□□□□ -2.4
USF1P22415 MIR548O-201ENST00000408583 114 ntBASIC0.06□□□□□ -2.4
USF1P22415 RNU7-102P-201ENST00000458948 62 ntBASIC0.06□□□□□ -2.4
USF1P22415 TRBVB-201ENST00000477100 408 ntBASIC0.06□□□□□ -2.4
USF1P22415 RNU6-958P-201ENST00000516995 106 ntBASIC0.06□□□□□ -2.4
USF1P22415 AC008608.1-201ENST00000603910 127 ntBASIC0.06□□□□□ -2.4
USF1P22415 RAC1P9-201ENST00000604990 392 ntBASIC0.06□□□□□ -2.4
USF1P22415 SNORA25.18-201ENST00000607153 114 ntBASIC0.06□□□□□ -2.4
USF1P22415 uc_338.6-201ENST00000613544 171 ntBASIC0.06□□□□□ -2.4
USF1P22415 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.06□□□□□ -2.4
USF1P22415 MIR6740-201ENST00000618268 113 ntBASIC0.06□□□□□ -2.4
USF1P22415 MIR4272-201ENST00000635924 64 ntBASIC0.06□□□□□ -2.4
USF1P22415 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
USF1P22415 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.06□□□□□ -2.4
USF1P22415 AC010332.2-201ENST00000613083 1904 ntBASIC0.06□□□□□ -2.4
USF1P22415 RNU6-1048P-201ENST00000364054 107 ntBASIC0.05□□□□□ -2.4
USF1P22415 RNU6-801P-201ENST00000364087 105 ntBASIC0.05□□□□□ -2.4
USF1P22415 Y_RNA.428-201ENST00000384078 102 ntBASIC0.05□□□□□ -2.4
USF1P22415 Y_RNA.458-201ENST00000384240 102 ntBASIC0.05□□□□□ -2.4
USF1P22415 Y_RNA.474-201ENST00000384341 102 ntBASIC0.05□□□□□ -2.4
USF1P22415 SNORA8.2-201ENST00000384372 139 ntBASIC0.05□□□□□ -2.4
USF1P22415 Y_RNA.494-201ENST00000384432 111 ntBASIC0.05□□□□□ -2.4
USF1P22415 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.05□□□□□ -2.4
USF1P22415 MIR1257-201ENST00000408490 117 ntBASIC0.05□□□□□ -2.4
USF1P22415 RNU2-14P-201ENST00000411053 191 ntBASIC0.05□□□□□ -2.4
USF1P22415 AC087499.4-201ENST00000448505 178 ntBASIC0.05□□□□□ -2.4
USF1P22415 RNU7-73P-201ENST00000458743 63 ntBASIC0.05□□□□□ -2.4
USF1P22415 AC069113.3-201ENST00000521019 150 ntBASIC0.05□□□□□ -2.4
USF1P22415 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.05□□□□□ -2.4
USF1P22415 SNORD92-201ENST00000585078 85 ntBASIC0.05□□□□□ -2.4
USF1P22415 AL121655.1-201ENST00000605811 308 ntBASIC0.05□□□□□ -2.4
USF1P22415 MIR8055-201ENST00000610739 97 ntBASIC0.05□□□□□ -2.4
USF1P22415 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.05□□□□□ -2.4
USF1P22415 AC022140.2-201ENST00000623500 188 ntBASIC0.05□□□□□ -2.4
USF1P22415 Z97988.1-201ENST00000637697 135 ntBASIC0.05□□□□□ -2.4
USF1P22415 RNA5SP117-201ENST00000365294 118 ntBASIC0.04□□□□□ -2.4
USF1P22415 RNU6-1040P-201ENST00000383974 107 ntBASIC0.04□□□□□ -2.4
USF1P22415 MIR518F-201ENST00000384973 87 ntBASIC0.04□□□□□ -2.4
USF1P22415 MIR329-2-201ENST00000385029 84 ntBASIC0.04□□□□□ -2.4
USF1P22415 AC073261.1-201ENST00000429409 121 ntBASIC0.04□□□□□ -2.4
USF1P22415 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.04□□□□□ -2.4
USF1P22415 RNU7-185P-201ENST00000459215 60 ntBASIC0.04□□□□□ -2.4
USF1P22415 Y_RNA.713-201ENST00000517013 96 ntBASIC0.04□□□□□ -2.4
USF1P22415 SNORD116.3-201ENST00000517176 78 ntBASIC0.04□□□□□ -2.4
USF1P22415 RNU7-156P-201ENST00000517214 74 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms