Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NCLP19338 Y_RNA.121-201ENST00000363309 113 ntBASIC1.9□□□□□ -2.11
NCLP19338 SNORD114-26-201ENST00000363543 72 ntBASIC1.9□□□□□ -2.11
NCLP19338 Y_RNA.297-201ENST00000364950 91 ntBASIC1.9□□□□□ -2.11
NCLP19338 RNU6-1138P-201ENST00000365359 106 ntBASIC1.9□□□□□ -2.11
NCLP19338 RNU6-1318P-201ENST00000365389 103 ntBASIC1.9□□□□□ -2.11
NCLP19338 RNU6-442P-201ENST00000383968 104 ntBASIC1.9□□□□□ -2.11
NCLP19338 MIR516B2-201ENST00000385190 85 ntBASIC1.9□□□□□ -2.11
NCLP19338 RNU2-55P-201ENST00000411146 174 ntBASIC1.9□□□□□ -2.11
NCLP19338 AL138752.1-201ENST00000452964 351 ntBASIC1.9□□□□□ -2.11
NCLP19338 AC245047.8-201ENST00000456455 284 ntBASIC1.9□□□□□ -2.11
NCLP19338 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.9□□□□□ -2.11
NCLP19338 SNORD77.4-201ENST00000516158 81 ntBASIC1.9□□□□□ -2.11
NCLP19338 RNU6-1020P-201ENST00000363684 107 ntBASIC1.89□□□□□ -2.11
NCLP19338 Y_RNA.274-201ENST00000364714 101 ntBASIC1.89□□□□□ -2.11
NCLP19338 SNORD26-201ENST00000384147 75 ntBASIC1.89□□□□□ -2.11
NCLP19338 SCARNA8-201ENST00000515924 131 ntBASIC1.89□□□□□ -2.11
NCLP19338 RNU6-138P-201ENST00000515952 107 ntBASIC1.89□□□□□ -2.11
NCLP19338 RNU7-149P-201ENST00000516739 59 ntBASIC1.89□□□□□ -2.11
NCLP19338 RNU6-165P-201ENST00000517170 99 ntBASIC1.89□□□□□ -2.11
NCLP19338 MIR4308-201ENST00000580634 81 ntBASIC1.89□□□□□ -2.11
NCLP19338 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.89□□□□□ -2.11
NCLP19338 MIR6734-201ENST00000621166 68 ntBASIC1.89□□□□□ -2.11
NCLP19338 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NCLP19338 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NCLP19338 Y_RNA.435-201ENST00000384095 112 ntBASIC1.88□□□□□ -2.11
NCLP19338 RNU6-42P-201ENST00000384165 107 ntBASIC1.88□□□□□ -2.11
NCLP19338 AL606845.1-201ENST00000404881 255 ntBASIC1.88□□□□□ -2.11
NCLP19338 MIR1276-201ENST00000408707 83 ntBASIC1.88□□□□□ -2.11
NCLP19338 RNU6-453P-201ENST00000516819 85 ntBASIC1.88□□□□□ -2.11
NCLP19338 AC019288.1-201ENST00000557918 224 ntBASIC1.88□□□□□ -2.11
NCLP19338 MIR4744-201ENST00000581563 82 ntBASIC1.88□□□□□ -2.11
NCLP19338 AL357312.1-201ENST00000603879 298 ntBASIC1.88□□□□□ -2.11
NCLP19338 AC090425.1-201ENST00000610007 140 ntBASIC1.88□□□□□ -2.11
NCLP19338 Pinc.1-201ENST00000616452 154 ntBASIC1.88□□□□□ -2.11
NCLP19338 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
NCLP19338 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.87□□□□□ -2.11
NCLP19338 RNU4-70P-201ENST00000384579 139 ntBASIC1.87□□□□□ -2.11
NCLP19338 Y_RNA.571-201ENST00000384753 98 ntBASIC1.87□□□□□ -2.11
NCLP19338 MT-TT-201ENST00000387460 66 ntBASIC1.87□□□□□ -2.11
NCLP19338 RNU6-918P-201ENST00000391219 106 ntBASIC1.87□□□□□ -2.11
NCLP19338 AC108059.2-201ENST00000434626 151 ntBASIC1.87□□□□□ -2.11
NCLP19338 RPL39P39-201ENST00000455840 151 ntBASIC1.87□□□□□ -2.11
NCLP19338 Y_RNA.644-201ENST00000459006 113 ntBASIC1.87□□□□□ -2.11
NCLP19338 RNU7-95P-201ENST00000459222 64 ntBASIC1.87□□□□□ -2.11
NCLP19338 Y_RNA.674-201ENST00000516362 113 ntBASIC1.87□□□□□ -2.11
NCLP19338 MIR502-201ENST00000606349 86 ntBASIC1.87□□□□□ -2.11
NCLP19338 RMST_2.1-201ENST00000617263 136 ntBASIC1.87□□□□□ -2.11
NCLP19338 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NCLP19338 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.87□□□□□ -2.11
NCLP19338 RNA5SP327-201ENST00000362494 101 ntBASIC1.86□□□□□ -2.11
NCLP19338 SNORD72-201ENST00000390994 80 ntBASIC1.86□□□□□ -2.11
NCLP19338 Y_RNA.793-201ENST00000411222 111 ntBASIC1.86□□□□□ -2.11
NCLP19338 DNAJC19P9-201ENST00000555084 351 ntBASIC1.86□□□□□ -2.11
NCLP19338 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.86□□□□□ -2.11
NCLP19338 AL078603.1-201ENST00000603824 313 ntBASIC1.86□□□□□ -2.11
NCLP19338 RNU2-4P-201ENST00000606190 192 ntBASIC1.86□□□□□ -2.11
NCLP19338 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NCLP19338 Y_RNA.29-201ENST00000362570 113 ntBASIC1.85□□□□□ -2.11
NCLP19338 RNU6-728P-201ENST00000365375 104 ntBASIC1.85□□□□□ -2.11
NCLP19338 Y_RNA.785-201ENST00000384290 109 ntBASIC1.85□□□□□ -2.11
NCLP19338 MIR150-201ENST00000385048 84 ntBASIC1.85□□□□□ -2.11
NCLP19338 MIR136-201ENST00000385207 82 ntBASIC1.85□□□□□ -2.11
NCLP19338 SNORA26-201ENST00000391286 122 ntBASIC1.85□□□□□ -2.11
NCLP19338 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.85□□□□□ -2.11
NCLP19338 RNU6-1299P-201ENST00000516316 100 ntBASIC1.85□□□□□ -2.11
NCLP19338 Y_RNA.327-201ENST00000365201 102 ntBASIC1.84□□□□□ -2.11
NCLP19338 SNORD38C-201ENST00000384381 69 ntBASIC1.84□□□□□ -2.11
NCLP19338 RNU6-578P-201ENST00000390980 103 ntBASIC1.84□□□□□ -2.11
NCLP19338 SNORA67.5-201ENST00000391036 107 ntBASIC1.84□□□□□ -2.11
NCLP19338 Y_RNA.797-201ENST00000515977 94 ntBASIC1.84□□□□□ -2.11
NCLP19338 AC006441.5-201ENST00000612680 209 ntBASIC1.84□□□□□ -2.11
NCLP19338 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.84□□□□□ -2.11
NCLP19338 RNU6-47P-201ENST00000383866 107 ntBASIC1.83□□□□□ -2.12
NCLP19338 Y_RNA.432-201ENST00000384087 111 ntBASIC1.83□□□□□ -2.12
NCLP19338 SNRPGP14-201ENST00000435400 219 ntBASIC1.83□□□□□ -2.12
NCLP19338 AC015922.2-201ENST00000435593 184 ntBASIC1.83□□□□□ -2.12
NCLP19338 SNRPGP8-201ENST00000454064 226 ntBASIC1.83□□□□□ -2.12
NCLP19338 SNORD111.1-201ENST00000516421 86 ntBASIC1.83□□□□□ -2.12
NCLP19338 RNA5SP153-201ENST00000516498 76 ntBASIC1.83□□□□□ -2.12
NCLP19338 SNORA81.3-201ENST00000517283 198 ntBASIC1.83□□□□□ -2.12
NCLP19338 AC090142.3-201ENST00000519012 385 ntBASIC1.83□□□□□ -2.12
NCLP19338 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.83□□□□□ -2.12
NCLP19338 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NCLP19338 AC072026.1-201ENST00000605023 201 ntBASIC1.83□□□□□ -2.12
NCLP19338 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.83□□□□□ -2.12
NCLP19338 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.83□□□□□ -2.12
NCLP19338 Y_RNA.182-201ENST00000363880 111 ntBASIC1.82□□□□□ -2.12
NCLP19338 RNU6-268P-201ENST00000364174 107 ntBASIC1.82□□□□□ -2.12
NCLP19338 SNORA79-201ENST00000408376 140 ntBASIC1.82□□□□□ -2.12
NCLP19338 Y_RNA.622-201ENST00000411091 108 ntBASIC1.82□□□□□ -2.12
NCLP19338 SNORA31.2-201ENST00000516019 134 ntBASIC1.82□□□□□ -2.12
NCLP19338 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.82□□□□□ -2.12
NCLP19338 AC109810.1-201ENST00000534066 224 ntBASIC1.82□□□□□ -2.12
NCLP19338 AP002392.1-201ENST00000537692 208 ntBASIC1.82□□□□□ -2.12
NCLP19338 AC108706.1-201ENST00000611053 297 ntBASIC1.82□□□□□ -2.12
NCLP19338 MIR6504-201ENST00000613520 61 ntBASIC1.82□□□□□ -2.12
NCLP19338 MIR7974-201ENST00000615835 79 ntBASIC1.82□□□□□ -2.12
NCLP19338 Y_RNA.30-201ENST00000362572 97 ntBASIC1.81□□□□□ -2.12
NCLP19338 Y_RNA.75-201ENST00000362927 97 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms