Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SNORA26-201ENST00000391286 122 ntBASIC1.42□□□□□ -2.18
CDH1P12830 SNORA79-201ENST00000408376 140 ntBASIC1.42□□□□□ -2.18
CDH1P12830 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
CDH1P12830 AC015922.2-201ENST00000435593 184 ntBASIC1.42□□□□□ -2.18
CDH1P12830 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
CDH1P12830 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
CDH1P12830 AL353997.5-201ENST00000618886 171 ntBASIC1.42□□□□□ -2.18
CDH1P12830 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDH1P12830 MIR302D-201ENST00000362275 68 ntBASIC1.41□□□□□ -2.18
CDH1P12830 RNU6-978P-201ENST00000364371 103 ntBASIC1.41□□□□□ -2.18
CDH1P12830 SNORD24-201ENST00000383884 75 ntBASIC1.41□□□□□ -2.18
CDH1P12830 RNU6-209P-201ENST00000384118 107 ntBASIC1.41□□□□□ -2.18
CDH1P12830 SNORD61-201ENST00000384252 73 ntBASIC1.41□□□□□ -2.18
CDH1P12830 MIR452-201ENST00000385020 85 ntBASIC1.41□□□□□ -2.18
CDH1P12830 RNU6-394P-201ENST00000410735 107 ntBASIC1.41□□□□□ -2.18
CDH1P12830 AC006461.1-201ENST00000412637 326 ntBASIC1.41□□□□□ -2.18
CDH1P12830 HSPE1P24-201ENST00000450782 238 ntBASIC1.41□□□□□ -2.18
CDH1P12830 RNU6-917P-201ENST00000516294 104 ntBASIC1.41□□□□□ -2.18
CDH1P12830 AC007751.1-201ENST00000529260 376 ntBASIC1.41□□□□□ -2.18
CDH1P12830 MIR378D2-201ENST00000580636 98 ntBASIC1.41□□□□□ -2.18
CDH1P12830 AC106754.2-201ENST00000623006 233 ntBASIC1.41□□□□□ -2.18
CDH1P12830 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.41□□□□□ -2.18
CDH1P12830 ICE2P2-201ENST00000483823 2787 ntBASIC1.4□□□□□ -2.19
CDH1P12830 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
CDH1P12830 RNU6-888P-201ENST00000363010 101 ntBASIC1.4□□□□□ -2.19
CDH1P12830 Y_RNA.272-201ENST00000364696 102 ntBASIC1.4□□□□□ -2.19
CDH1P12830 RNA5SP259-201ENST00000365541 109 ntBASIC1.4□□□□□ -2.19
CDH1P12830 MIR548O-201ENST00000408583 114 ntBASIC1.4□□□□□ -2.19
CDH1P12830 SNRPGP13-201ENST00000442212 177 ntBASIC1.4□□□□□ -2.19
CDH1P12830 AC107027.2-201ENST00000512197 115 ntBASIC1.4□□□□□ -2.19
CDH1P12830 RNU7-25P-201ENST00000516544 62 ntBASIC1.4□□□□□ -2.19
CDH1P12830 RNU6-504P-201ENST00000516568 104 ntBASIC1.4□□□□□ -2.19
CDH1P12830 RNU7-121P-201ENST00000516604 62 ntBASIC1.4□□□□□ -2.19
CDH1P12830 SNORA44.1-201ENST00000517031 108 ntBASIC1.4□□□□□ -2.19
CDH1P12830 MIR4524B-201ENST00000581569 115 ntBASIC1.4□□□□□ -2.19
CDH1P12830 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CDH1P12830 Y_RNA.357-201ENST00000365487 109 ntBASIC1.39□□□□□ -2.19
CDH1P12830 Y_RNA.464-201ENST00000384282 110 ntBASIC1.39□□□□□ -2.19
CDH1P12830 SNORD38C-201ENST00000384381 69 ntBASIC1.39□□□□□ -2.19
CDH1P12830 Y_RNA.547-201ENST00000384654 119 ntBASIC1.39□□□□□ -2.19
CDH1P12830 MIR518F-201ENST00000384973 87 ntBASIC1.39□□□□□ -2.19
CDH1P12830 MIR516B2-201ENST00000385190 85 ntBASIC1.39□□□□□ -2.19
CDH1P12830 MIR653-201ENST00000385279 96 ntBASIC1.39□□□□□ -2.19
CDH1P12830 RNU6-239P-201ENST00000390990 99 ntBASIC1.39□□□□□ -2.19
CDH1P12830 snoU13.9-201ENST00000458927 103 ntBASIC1.39□□□□□ -2.19
CDH1P12830 AC092991.1-201ENST00000477176 376 ntBASIC1.39□□□□□ -2.19
CDH1P12830 RNU6-830P-201ENST00000516353 107 ntBASIC1.39□□□□□ -2.19
CDH1P12830 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
CDH1P12830 MIR3198-2-201ENST00000577868 80 ntBASIC1.39□□□□□ -2.19
CDH1P12830 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.38□□□□□ -2.19
CDH1P12830 SNORD1A-201ENST00000364968 72 ntBASIC1.38□□□□□ -2.19
CDH1P12830 SNORA2.2-201ENST00000365473 135 ntBASIC1.38□□□□□ -2.19
CDH1P12830 MIR136-201ENST00000385207 82 ntBASIC1.38□□□□□ -2.19
CDH1P12830 RNU4-57P-201ENST00000515980 135 ntBASIC1.38□□□□□ -2.19
CDH1P12830 RNU6-693P-201ENST00000516134 107 ntBASIC1.38□□□□□ -2.19
CDH1P12830 SNORD116-25-201ENST00000516517 92 ntBASIC1.38□□□□□ -2.19
CDH1P12830 RNU6-1212P-201ENST00000517023 104 ntBASIC1.38□□□□□ -2.19
CDH1P12830 RNU6-1270P-201ENST00000517128 108 ntBASIC1.38□□□□□ -2.19
CDH1P12830 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.38□□□□□ -2.19
CDH1P12830 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH1P12830 AC104465.1-201ENST00000611365 139 ntBASIC1.38□□□□□ -2.19
CDH1P12830 MIR8063-201ENST00000621930 81 ntBASIC1.38□□□□□ -2.19
CDH1P12830 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.38□□□□□ -2.19
CDH1P12830 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
CDH1P12830 SNORA1-201ENST00000384107 130 ntBASIC1.37□□□□□ -2.19
CDH1P12830 RNU6-804P-201ENST00000384286 107 ntBASIC1.37□□□□□ -2.19
CDH1P12830 RNU6-768P-201ENST00000384683 107 ntBASIC1.37□□□□□ -2.19
CDH1P12830 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.37□□□□□ -2.19
CDH1P12830 MIR3144-201ENST00000579460 79 ntBASIC1.37□□□□□ -2.19
CDH1P12830 FAM106DP-201ENST00000586416 501 ntBASIC1.37□□□□□ -2.19
CDH1P12830 AL365434.2-201ENST00000607979 234 ntBASIC1.37□□□□□ -2.19
CDH1P12830 AC015726.2-201ENST00000620112 122 ntBASIC1.37□□□□□ -2.19
CDH1P12830 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
CDH1P12830 Y_RNA.337-201ENST00000365312 102 ntBASIC1.36□□□□□ -2.19
CDH1P12830 RNU6-597P-201ENST00000365620 102 ntBASIC1.36□□□□□ -2.19
CDH1P12830 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CDH1P12830 Y_RNA.580-201ENST00000391004 95 ntBASIC1.36□□□□□ -2.19
CDH1P12830 AF228730.3-201ENST00000436691 102 ntBASIC1.36□□□□□ -2.19
CDH1P12830 AC090049.2-201ENST00000550377 109 ntBASIC1.36□□□□□ -2.19
CDH1P12830 AL365205.2-201ENST00000594586 68 ntBASIC1.36□□□□□ -2.19
CDH1P12830 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CDH1P12830 AC021753.1-201ENST00000635724 168 ntBASIC1.36□□□□□ -2.19
CDH1P12830 SNORD115-28-201ENST00000363931 81 ntBASIC1.35□□□□□ -2.19
CDH1P12830 RNU6-1130P-201ENST00000365434 107 ntBASIC1.35□□□□□ -2.19
CDH1P12830 Y_RNA.393-201ENST00000383936 102 ntBASIC1.35□□□□□ -2.19
CDH1P12830 SNORD41-201ENST00000386967 70 ntBASIC1.35□□□□□ -2.19
CDH1P12830 RNU4-62P-201ENST00000410125 130 ntBASIC1.35□□□□□ -2.19
CDH1P12830 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.35□□□□□ -2.19
CDH1P12830 DNAJC19P9-201ENST00000555084 351 ntBASIC1.35□□□□□ -2.19
CDH1P12830 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
CDH1P12830 MIR3658-201ENST00000636291 56 ntBASIC1.35□□□□□ -2.19
CDH1P12830 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
CDH1P12830 Y_RNA.37-201ENST00000362606 108 ntBASIC1.34□□□□□ -2.19
CDH1P12830 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
CDH1P12830 Y_RNA.398-201ENST00000383952 99 ntBASIC1.34□□□□□ -2.19
CDH1P12830 Y_RNA.521-201ENST00000384560 114 ntBASIC1.34□□□□□ -2.19
CDH1P12830 Y_RNA.542-201ENST00000384641 111 ntBASIC1.34□□□□□ -2.19
CDH1P12830 SNORD77.3-201ENST00000391113 65 ntBASIC1.34□□□□□ -2.19
CDH1P12830 RNU6-938P-201ENST00000411285 103 ntBASIC1.34□□□□□ -2.19
CDH1P12830 AC108667.1-201ENST00000428618 249 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 183.2 ms