Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 SNORD83.1-201ENST00000411362 77 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 RNU7-67P-201ENST00000459003 62 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 snoU13.16-201ENST00000459350 104 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 Y_RNA.666-201ENST00000516187 112 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 AC018659.1-201ENST00000551083 169 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 MIR4724-201ENST00000579485 89 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 Z83818.1-201ENST00000603584 150 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 LARP7P1-201ENST00000605576 316 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 AL021707.8-201ENST00000609428 183 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 RMST_2.1-201ENST00000617263 136 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
IGHV3-43DP0DP04 SNORD115-34-201ENST00000362441 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-369P-201ENST00000362515 102 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-12-201ENST00000362583 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-1272P-201ENST00000362776 107 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-29-201ENST00000362834 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-9-201ENST00000362912 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-21-201ENST00000362963 81 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-14-201ENST00000363090 81 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-13-201ENST00000363358 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-41-201ENST00000363608 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-11-201ENST00000363616 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-5-201ENST00000363633 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-39-201ENST00000363694 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-4-201ENST00000363810 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-16-201ENST00000363887 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-6-201ENST00000363942 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-42-201ENST00000364273 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-15-201ENST00000364809 81 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.293-201ENST00000364908 93 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-1-201ENST00000364961 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-26-201ENST00000365067 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-10-201ENST00000365073 81 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-290P-201ENST00000365212 101 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-1138P-201ENST00000365359 106 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-43-201ENST00000365503 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-36-201ENST00000365629 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-514P-201ENST00000384208 107 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 MIR520F-201ENST00000384824 87 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 MIR520H-201ENST00000385126 88 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 PMCHL1-202ENST00000423102 261 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 BTF3P11-201ENST00000426582 477 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 AC098934.3-201ENST00000430450 190 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 MTND4LP30-201ENST00000454092 297 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-977P-201ENST00000516411 103 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORA40.15-201ENST00000516884 107 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.721-201ENST00000517207 102 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 MIR4771-2-201ENST00000577758 74 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 MIR5692C2-201ENST00000577959 77 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 MIR4771-1-201ENST00000582617 74 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 MIR151B-201ENST00000584249 96 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-40-201ENST00000606510 82 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 AC037487.3-201ENST00000606668 112 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 AC134878.1-201ENST00000619901 243 ntBASIC0.4□□□□□ -2.35
IGHV3-43DP0DP04 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 SNORA25.1-201ENST00000362326 128 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.105-201ENST00000363182 111 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 RNY1P8-201ENST00000383970 114 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 SNORA24-201ENST00000384096 131 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 MIR573-201ENST00000384964 99 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 SNORA53-201ENST00000391141 249 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 AC090844.1-201ENST00000422019 156 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 AC015818.7-201ENST00000428754 109 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 AC087499.7-201ENST00000441958 109 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 RNU2-31P-201ENST00000516954 155 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 AL355297.3-201ENST00000604082 446 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.39□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.28-201ENST00000362554 111 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 SNORD115-28-201ENST00000363931 81 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.224-201ENST00000364308 111 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.394-201ENST00000383942 103 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 Y_RNA.494-201ENST00000384432 111 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-121P-201ENST00000410525 99 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 RNU7-62P-201ENST00000458856 62 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 AC091959.1-201ENST00000495857 238 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 SNORD77.4-201ENST00000516158 81 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-958P-201ENST00000516995 106 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 MIR4662B-201ENST00000579498 81 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 AC068700.1-201ENST00000565862 3754 ntBASIC0.38□□□□□ -2.35
IGHV3-43DP0DP04 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 RNA5SP347-201ENST00000362445 119 ntBASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-662P-201ENST00000384253 104 ntBASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 MIR140-201ENST00000385282 100 ntBASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-177P-201ENST00000411257 104 ntBASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 AC087499.4-201ENST00000448505 178 ntBASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 RNU6-988P-201ENST00000519081 107 ntBASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 AC007751.1-201ENST00000529260 376 ntBASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 MIR5000-201ENST00000577717 103 ntBASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 AP000942.4-201ENST00000604811 241 ntBASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
IGHV3-43DP0DP04 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms