Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.26□□□□□ -2.61
TCRAP04437 AL593851.1-201ENST00000426171 157 ntBASIC-1.26□□□□□ -2.61
TCRAP04437 SPINT5P-201ENST00000448174 155 ntBASIC-1.26□□□□□ -2.61
TCRAP04437 AL009048.1-201ENST00000450437 298 ntBASIC-1.26□□□□□ -2.61
TCRAP04437 AC021146.6-201ENST00000514659 117 ntBASIC-1.26□□□□□ -2.61
TCRAP04437 AC073648.5-201ENST00000603502 305 ntBASIC-1.26□□□□□ -2.61
TCRAP04437 AC011373.1-201ENST00000607270 237 ntBASIC-1.26□□□□□ -2.61
TCRAP04437 RNU6-254P-201ENST00000363377 107 ntBASIC-1.27□□□□□ -2.61
TCRAP04437 SNORA72.3-201ENST00000365074 132 ntBASIC-1.27□□□□□ -2.61
TCRAP04437 MIR548O-201ENST00000408583 114 ntBASIC-1.27□□□□□ -2.61
TCRAP04437 RPL30P15-201ENST00000457129 321 ntBASIC-1.27□□□□□ -2.61
TCRAP04437 RPS29P24-201ENST00000486345 171 ntBASIC-1.27□□□□□ -2.61
TCRAP04437 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.27□□□□□ -2.61
TCRAP04437 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.27□□□□□ -2.61
TCRAP04437 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-1.27□□□□□ -2.61
TCRAP04437 AP003357.1-201ENST00000604497 148 ntBASIC-1.27□□□□□ -2.61
TCRAP04437 MIR6738-201ENST00000619620 64 ntBASIC-1.27□□□□□ -2.61
TCRAP04437 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.28□□□□□ -2.61
TCRAP04437 MIR190B-201ENST00000401119 79 ntBASIC-1.28□□□□□ -2.61
TCRAP04437 MTND2P9-201ENST00000422293 931 ntBASIC-1.28□□□□□ -2.61
TCRAP04437 AC244505.6-201ENST00000452829 130 ntBASIC-1.28□□□□□ -2.61
TCRAP04437 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.28□□□□□ -2.61
TCRAP04437 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.28□□□□□ -2.61
TCRAP04437 MIR4273-201ENST00000582824 84 ntBASIC-1.28□□□□□ -2.61
TCRAP04437 RNU6-490P-201ENST00000362985 107 ntBASIC-1.29□□□□□ -2.62
TCRAP04437 RNU6-318P-201ENST00000384283 103 ntBASIC-1.29□□□□□ -2.62
TCRAP04437 SNORA27-201ENST00000384323 126 ntBASIC-1.29□□□□□ -2.62
TCRAP04437 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.29□□□□□ -2.62
TCRAP04437 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.29□□□□□ -2.62
TCRAP04437 RNA5SP67-201ENST00000516422 131 ntBASIC-1.29□□□□□ -2.62
TCRAP04437 RNU7-161P-201ENST00000517289 62 ntBASIC-1.29□□□□□ -2.62
TCRAP04437 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.29□□□□□ -2.62
TCRAP04437 SNORA63.5-201ENST00000363548 123 ntBASIC-1.3□□□□□ -2.62
TCRAP04437 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.3□□□□□ -2.62
TCRAP04437 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.3□□□□□ -2.62
TCRAP04437 MIR587-201ENST00000384845 96 ntBASIC-1.3□□□□□ -2.62
TCRAP04437 MIR548I3-201ENST00000408378 149 ntBASIC-1.3□□□□□ -2.62
TCRAP04437 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.3□□□□□ -2.62
TCRAP04437 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.3□□□□□ -2.62
TCRAP04437 RNA5SP169-201ENST00000517268 117 ntBASIC-1.3□□□□□ -2.62
TCRAP04437 AC127455.1-201ENST00000565496 145 ntBASIC-1.3□□□□□ -2.62
TCRAP04437 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.3□□□□□ -2.62
TCRAP04437 FGF7P2-201ENST00000332473 296 ntBASIC-1.31□□□□□ -2.62
TCRAP04437 RNU6-509P-201ENST00000363519 107 ntBASIC-1.31□□□□□ -2.62
TCRAP04437 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.31□□□□□ -2.62
TCRAP04437 MIR514A2-201ENST00000385131 88 ntBASIC-1.31□□□□□ -2.62
TCRAP04437 MIR514A3-201ENST00000385132 88 ntBASIC-1.31□□□□□ -2.62
TCRAP04437 SNORD77.3-201ENST00000391113 65 ntBASIC-1.31□□□□□ -2.62
TCRAP04437 RNU7-104P-201ENST00000459398 79 ntBASIC-1.31□□□□□ -2.62
TCRAP04437 RNU6-436P-201ENST00000516171 114 ntBASIC-1.31□□□□□ -2.62
TCRAP04437 SNORA25.16-201ENST00000516741 121 ntBASIC-1.31□□□□□ -2.62
TCRAP04437 MIR4324-201ENST00000584846 72 ntBASIC-1.31□□□□□ -2.62
TCRAP04437 AC018638.8-201ENST00000588755 281 ntBASIC-1.31□□□□□ -2.62
TCRAP04437 SNORD115-28-201ENST00000363931 81 ntBASIC-1.32□□□□□ -2.62
TCRAP04437 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.32□□□□□ -2.62
TCRAP04437 MIR204-201ENST00000385200 110 ntBASIC-1.32□□□□□ -2.62
TCRAP04437 RNU6-710P-201ENST00000410424 105 ntBASIC-1.32□□□□□ -2.62
TCRAP04437 USP9YP30-201ENST00000430729 455 ntBASIC-1.32□□□□□ -2.62
TCRAP04437 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC-1.32□□□□□ -2.62
TCRAP04437 SNORD11-201ENST00000459124 84 ntBASIC-1.32□□□□□ -2.62
TCRAP04437 SNORA27.4-201ENST00000516650 95 ntBASIC-1.32□□□□□ -2.62
TCRAP04437 AC141846.1-201ENST00000568348 142 ntBASIC-1.32□□□□□ -2.62
TCRAP04437 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 RNA5SP403-201ENST00000363598 108 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 RNU6-522P-201ENST00000364497 107 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 RNU6-10P-201ENST00000384036 107 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 RNU6-949P-201ENST00000384040 107 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 SNORD12B-201ENST00000410433 91 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.33□□□□□ -2.62
TCRAP04437 MTND3P16-201ENST00000452205 344 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 AC010655.3-201ENST00000478818 450 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 AC083904.1-201ENST00000487828 231 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 RNU6-408P-201ENST00000515910 100 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 RNU6-311P-201ENST00000516224 102 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 RNA5SP476-201ENST00000516613 103 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 MTCO2P4-201ENST00000517968 247 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 AC055872.1-201ENST00000570978 278 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 AC060780.3-201ENST00000589464 80 ntBASIC-1.33□□□□□ -2.62
TCRAP04437 RNU6-653P-201ENST00000363074 106 ntBASIC-1.34□□□□□ -2.62
TCRAP04437 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.34□□□□□ -2.62
TCRAP04437 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.34□□□□□ -2.62
TCRAP04437 RNU6-455P-201ENST00000384681 107 ntBASIC-1.34□□□□□ -2.62
TCRAP04437 SNORA40.4-201ENST00000390971 128 ntBASIC-1.34□□□□□ -2.62
TCRAP04437 MTCO2P19-201ENST00000427513 598 ntBASIC-1.34□□□□□ -2.62
TCRAP04437 RNU6-881P-201ENST00000516813 102 ntBASIC-1.34□□□□□ -2.62
TCRAP04437 MIR5701-3-201ENST00000578890 82 ntBASIC-1.34□□□□□ -2.62
TCRAP04437 MIR4423-201ENST00000580922 80 ntBASIC-1.34□□□□□ -2.62
TCRAP04437 MIR5701-1-201ENST00000585138 82 ntBASIC-1.34□□□□□ -2.62
TCRAP04437 MIR5701-2-201ENST00000615634 82 ntBASIC-1.34□□□□□ -2.62
TCRAP04437 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.35□□□□□ -2.63
TCRAP04437 RNU4-36P-201ENST00000364294 144 ntBASIC-1.35□□□□□ -2.63
TCRAP04437 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.35□□□□□ -2.63
TCRAP04437 Y_RNA.560-201ENST00000384689 102 ntBASIC-1.35□□□□□ -2.63
TCRAP04437 RNU4-55P-201ENST00000410731 137 ntBASIC-1.35□□□□□ -2.63
TCRAP04437 RNU6-938P-201ENST00000411285 103 ntBASIC-1.35□□□□□ -2.63
TCRAP04437 AL353193.1-201ENST00000421444 268 ntBASIC-1.35□□□□□ -2.63
TCRAP04437 RNU7-87P-201ENST00000459343 62 ntBASIC-1.35□□□□□ -2.63
TCRAP04437 RNU7-96P-201ENST00000459535 64 ntBASIC-1.35□□□□□ -2.63
TCRAP04437 RNU7-115P-201ENST00000516433 55 ntBASIC-1.35□□□□□ -2.63
TCRAP04437 AL356055.1-201ENST00000602528 446 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms