Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 SNORA75.2-201ENST00000391138 150 ntBASIC0.77□□□□□ -2.29
MMP1P03956 SNORA75.3-201ENST00000391231 150 ntBASIC0.77□□□□□ -2.29
MMP1P03956 MTND5P15-201ENST00000434246 349 ntBASIC0.77□□□□□ -2.29
MMP1P03956 AC245047.8-201ENST00000456455 284 ntBASIC0.77□□□□□ -2.29
MMP1P03956 PDCD5P2-201ENST00000507570 312 ntBASIC0.77□□□□□ -2.29
MMP1P03956 RNU6-1143P-201ENST00000516125 104 ntBASIC0.77□□□□□ -2.29
MMP1P03956 RNU6-1338P-201ENST00000516328 91 ntBASIC0.77□□□□□ -2.29
MMP1P03956 SNORA27.4-201ENST00000516650 95 ntBASIC0.77□□□□□ -2.29
MMP1P03956 Y_RNA.714-201ENST00000517065 90 ntBASIC0.77□□□□□ -2.29
MMP1P03956 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
MMP1P03956 MIR5692C2-201ENST00000577959 77 ntBASIC0.77□□□□□ -2.29
MMP1P03956 MIR2681-201ENST00000581814 105 ntBASIC0.77□□□□□ -2.29
MMP1P03956 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
MMP1P03956 AP001282.2-201ENST00000616149 309 ntBASIC0.77□□□□□ -2.29
MMP1P03956 AC022140.2-201ENST00000623500 188 ntBASIC0.77□□□□□ -2.29
MMP1P03956 snoU18.1-201ENST00000629629 71 ntBASIC0.77□□□□□ -2.29
MMP1P03956 UBE2WP1-201ENST00000362030 340 ntBASIC0.76□□□□□ -2.29
MMP1P03956 SNORA25.1-201ENST00000362326 128 ntBASIC0.76□□□□□ -2.29
MMP1P03956 RNU6-1205P-201ENST00000363625 106 ntBASIC0.76□□□□□ -2.29
MMP1P03956 SNORA53-201ENST00000391141 249 ntBASIC0.76□□□□□ -2.29
MMP1P03956 BTF3P11-201ENST00000426582 477 ntBASIC0.76□□□□□ -2.29
MMP1P03956 RNU7-21P-201ENST00000459430 62 ntBASIC0.76□□□□□ -2.29
MMP1P03956 MTATP8P1-201ENST00000467115 207 ntBASIC0.76□□□□□ -2.29
MMP1P03956 SERF1AP1-201ENST00000514575 187 ntBASIC0.76□□□□□ -2.29
MMP1P03956 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
MMP1P03956 RNU6-830P-201ENST00000516353 107 ntBASIC0.76□□□□□ -2.29
MMP1P03956 RNU6-570P-201ENST00000517051 105 ntBASIC0.76□□□□□ -2.29
MMP1P03956 AC004812.1-201ENST00000540773 146 ntBASIC0.76□□□□□ -2.29
MMP1P03956 MIR4711-201ENST00000578274 70 ntBASIC0.76□□□□□ -2.29
MMP1P03956 MIR4764-201ENST00000580680 88 ntBASIC0.76□□□□□ -2.29
MMP1P03956 AC106800.4-201ENST00000614905 153 ntBASIC0.76□□□□□ -2.29
MMP1P03956 AC008163.1-202ENST00000636004 2889 ntBASIC0.76□□□□□ -2.29
MMP1P03956 SNORA63C-201ENST00000364578 129 ntBASIC0.75□□□□□ -2.29
MMP1P03956 Y_RNA.376-201ENST00000365638 108 ntBASIC0.75□□□□□ -2.29
MMP1P03956 RNU6-144P-201ENST00000383951 107 ntBASIC0.75□□□□□ -2.29
MMP1P03956 RNU6-442P-201ENST00000383968 104 ntBASIC0.75□□□□□ -2.29
MMP1P03956 MIR520C-201ENST00000385005 87 ntBASIC0.75□□□□□ -2.29
MMP1P03956 MIR548F4-201ENST00000408515 105 ntBASIC0.75□□□□□ -2.29
MMP1P03956 MIR1185-1-201ENST00000408598 86 ntBASIC0.75□□□□□ -2.29
MMP1P03956 MIR1302-7-201ENST00000408841 72 ntBASIC0.75□□□□□ -2.29
MMP1P03956 RNA5SP193-201ENST00000410353 107 ntBASIC0.75□□□□□ -2.29
MMP1P03956 RN7SKP164-201ENST00000516138 266 ntBASIC0.75□□□□□ -2.29
MMP1P03956 SCARNA24.2-201ENST00000516968 130 ntBASIC0.75□□□□□ -2.29
MMP1P03956 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.75□□□□□ -2.29
MMP1P03956 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.75□□□□□ -2.29
MMP1P03956 MIR548AR-201ENST00000582191 57 ntBASIC0.75□□□□□ -2.29
MMP1P03956 AC006441.5-201ENST00000612680 209 ntBASIC0.75□□□□□ -2.29
MMP1P03956 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
MMP1P03956 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.74□□□□□ -2.29
MMP1P03956 AL589743.1-201ENST00000551932 2712 ntBASIC0.74□□□□□ -2.29
MMP1P03956 RNA5SP264-201ENST00000363115 107 ntBASIC0.74□□□□□ -2.29
MMP1P03956 SNORA25.3-201ENST00000363205 127 ntBASIC0.74□□□□□ -2.29
MMP1P03956 RNU6-694P-201ENST00000364071 147 ntBASIC0.74□□□□□ -2.29
MMP1P03956 RNU4-10P-201ENST00000364383 140 ntBASIC0.74□□□□□ -2.29
MMP1P03956 RNU6-1160P-201ENST00000384546 104 ntBASIC0.74□□□□□ -2.29
MMP1P03956 MIR15B-201ENST00000385045 98 ntBASIC0.74□□□□□ -2.29
MMP1P03956 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.74□□□□□ -2.29
MMP1P03956 MTND4LP30-201ENST00000454092 297 ntBASIC0.74□□□□□ -2.29
MMP1P03956 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.74□□□□□ -2.29
MMP1P03956 RNU7-43P-201ENST00000516554 64 ntBASIC0.74□□□□□ -2.29
MMP1P03956 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.74□□□□□ -2.29
MMP1P03956 MIR924-201ENST00000638017 53 ntBASIC0.74□□□□□ -2.29
MMP1P03956 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.73□□□□□ -2.29
MMP1P03956 RNA5SP347-201ENST00000362445 119 ntBASIC0.73□□□□□ -2.29
MMP1P03956 Y_RNA.117-201ENST00000363294 101 ntBASIC0.73□□□□□ -2.29
MMP1P03956 Y_RNA.237-201ENST00000364439 102 ntBASIC0.73□□□□□ -2.29
MMP1P03956 Y_RNA.275-201ENST00000364726 110 ntBASIC0.73□□□□□ -2.29
MMP1P03956 RNU6-514P-201ENST00000384208 107 ntBASIC0.73□□□□□ -2.29
MMP1P03956 SNORD38C-201ENST00000384381 69 ntBASIC0.73□□□□□ -2.29
MMP1P03956 Y_RNA.572-201ENST00000384757 98 ntBASIC0.73□□□□□ -2.29
MMP1P03956 MT-TW-201ENST00000387382 68 ntBASIC0.73□□□□□ -2.29
MMP1P03956 RNU6-651P-201ENST00000411040 105 ntBASIC0.73□□□□□ -2.29
MMP1P03956 RNU2-64P-201ENST00000411315 191 ntBASIC0.73□□□□□ -2.29
MMP1P03956 RNU7-90P-201ENST00000459216 62 ntBASIC0.73□□□□□ -2.29
MMP1P03956 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.73□□□□□ -2.29
MMP1P03956 RNU4-57P-201ENST00000515980 135 ntBASIC0.73□□□□□ -2.29
MMP1P03956 RNU6-197P-201ENST00000516680 100 ntBASIC0.73□□□□□ -2.29
MMP1P03956 Y_RNA.720-201ENST00000517166 92 ntBASIC0.73□□□□□ -2.29
MMP1P03956 Pinc.1-201ENST00000616452 154 ntBASIC0.73□□□□□ -2.29
MMP1P03956 Y_RNA.115-201ENST00000363272 98 ntBASIC0.72□□□□□ -2.29
MMP1P03956 RNU6-211P-201ENST00000384047 107 ntBASIC0.72□□□□□ -2.29
MMP1P03956 Y_RNA.422-201ENST00000384054 114 ntBASIC0.72□□□□□ -2.29
MMP1P03956 RNU6-472P-201ENST00000384299 107 ntBASIC0.72□□□□□ -2.29
MMP1P03956 RNU6-1289P-201ENST00000384431 106 ntBASIC0.72□□□□□ -2.29
MMP1P03956 Y_RNA.518-201ENST00000384552 113 ntBASIC0.72□□□□□ -2.29
MMP1P03956 MIR608-201ENST00000384820 100 ntBASIC0.72□□□□□ -2.29
MMP1P03956 MIR570-201ENST00000384917 97 ntBASIC0.72□□□□□ -2.29
MMP1P03956 U8.17-201ENST00000391292 132 ntBASIC0.72□□□□□ -2.29
MMP1P03956 MIR942-201ENST00000401111 86 ntBASIC0.72□□□□□ -2.29
MMP1P03956 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.72□□□□□ -2.29
MMP1P03956 TRBVB-201ENST00000477100 408 ntBASIC0.72□□□□□ -2.29
MMP1P03956 MTCO2P24-201ENST00000515611 426 ntBASIC0.72□□□□□ -2.29
MMP1P03956 RNU6-635P-201ENST00000516651 102 ntBASIC0.72□□□□□ -2.29
MMP1P03956 RNU7-149P-201ENST00000516739 59 ntBASIC0.72□□□□□ -2.29
MMP1P03956 RNA5SP330-201ENST00000517096 96 ntBASIC0.72□□□□□ -2.29
MMP1P03956 RNU7-181P-201ENST00000517234 74 ntBASIC0.72□□□□□ -2.29
MMP1P03956 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.72□□□□□ -2.29
MMP1P03956 AL049861.1-201ENST00000603130 150 ntBASIC0.72□□□□□ -2.29
MMP1P03956 AC037487.3-201ENST00000606668 112 ntBASIC0.72□□□□□ -2.29
MMP1P03956 uc_338.4-201ENST00000616635 176 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms