| C9 | P02748 | RNU6-437P-201 | ENST00000459408 | 95 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| C9 | P02748 | SNORD111.1-201 | ENST00000516421 | 86 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| C9 | P02748 | SNORD45.4-201 | ENST00000516629 | 73 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| C9 | P02748 | SNORA70.22-201 | ENST00000517160 | 124 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| C9 | P02748 | AL442067.1-201 | ENST00000613261 | 223 nt | BASIC | 1.13 | □□□□□ -2.23 | | |
| C9 | P02748 | RNU6-1205P-201 | ENST00000363625 | 106 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | Y_RNA.229-201 | ENST00000364347 | 113 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | SNORA20.1-201 | ENST00000364790 | 130 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | Y_RNA.293-201 | ENST00000364908 | 93 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | Y_RNA.336-201 | ENST00000365307 | 109 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | RNU6-131P-201 | ENST00000391144 | 107 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | RNU6-493P-201 | ENST00000391321 | 108 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | MIR548H3-201 | ENST00000408771 | 118 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | SNRPGP14-201 | ENST00000435400 | 219 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | COX6CP14-201 | ENST00000469580 | 174 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | RPL23AP91-201 | ENST00000569211 | 455 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | AL357312.1-201 | ENST00000603879 | 298 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | AC009779.6-201 | ENST00000603972 | 165 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | AC037487.3-201 | ENST00000606668 | 112 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | AL096861.1-201 | ENST00000610899 | 123 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | U6.104-201 | ENST00000637979 | 90 nt | BASIC | 1.12 | □□□□□ -2.23 | | |
| C9 | P02748 | Y_RNA.401-201 | ENST00000383965 | 117 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | RNU6-918P-201 | ENST00000391219 | 106 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | RNU6-381P-201 | ENST00000391259 | 108 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | MIR1285-1-201 | ENST00000408593 | 84 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | AC245047.7-201 | ENST00000440265 | 293 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | HMGN2P32-201 | ENST00000444648 | 269 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | AC095059.1-201 | ENST00000502570 | 349 nt | TSL 5 BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | AC122707.1-201 | ENST00000502882 | 219 nt | TSL 2 BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | SNORA31.4-201 | ENST00000516049 | 129 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | Y_RNA.679-201 | ENST00000516416 | 91 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | Y_RNA.714-201 | ENST00000517065 | 90 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | AC087685.1-201 | ENST00000587507 | 141 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | AP000942.4-201 | ENST00000604811 | 241 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | AC090425.1-201 | ENST00000610007 | 140 nt | BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | LRRIQ1-202 | ENST00000393217 | 5394 nt | APPRIS P1 TSL 1 (best) BASIC | 1.11 | □□□□□ -2.23 | | |
| C9 | P02748 | HIF1A-204 | ENST00000539097 | 3956 nt | TSL 1 (best) BASIC | 1.1 | □□□□□ -2.23 | | |
| C9 | P02748 | snoU2-30.1-201 | ENST00000365012 | 70 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| C9 | P02748 | Y_RNA.308-201 | ENST00000365043 | 101 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| C9 | P02748 | Y_RNA.478-201 | ENST00000384358 | 107 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| C9 | P02748 | RNU6-939P-201 | ENST00000384634 | 107 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| C9 | P02748 | TRAJ3-201 | ENST00000390534 | 62 nt | APPRIS P1 BASIC | 1.1 | □□□□□ -2.23 | | |
| C9 | P02748 | RNU6ATAC8P-201 | ENST00000408460 | 126 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| C9 | P02748 | RNU6-1054P-201 | ENST00000411293 | 104 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| C9 | P02748 | AL591704.2-201 | ENST00000421658 | 181 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| C9 | P02748 | AL049861.1-201 | ENST00000603130 | 150 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| C9 | P02748 | AC027335.2-201 | ENST00000624030 | 375 nt | BASIC | 1.1 | □□□□□ -2.23 | | |
| C9 | P02748 | MIR96-201 | ENST00000362288 | 78 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| C9 | P02748 | Y_RNA.363-201 | ENST00000365529 | 113 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| C9 | P02748 | MIR618-201 | ENST00000385287 | 98 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| C9 | P02748 | MIR526A2-201 | ENST00000390198 | 65 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| C9 | P02748 | RNU6-138P-201 | ENST00000515952 | 107 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| C9 | P02748 | RNA5SP404-201 | ENST00000517118 | 132 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| C9 | P02748 | AC090142.3-201 | ENST00000519012 | 385 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| C9 | P02748 | MIR2681-201 | ENST00000581814 | 105 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| C9 | P02748 | JPX_2.1-201 | ENST00000614161 | 69 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| C9 | P02748 | AC141273.2-201 | ENST00000618989 | 130 nt | BASIC | 1.09 | □□□□□ -2.23 | | |
| C9 | P02748 | CEP162-202 | ENST00000403245 | 5156 nt | APPRIS P1 TSL 5 BASIC | 1.09 | □□□□□ -2.24 | | |
| C9 | P02748 | IL6ST-203 | ENST00000381287 | 8667 nt | TSL 5 BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | SNORD114-27-201 | ENST00000363766 | 70 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | Y_RNA.191-201 | ENST00000363972 | 113 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | RNU6-1228P-201 | ENST00000391014 | 107 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | AL353742.1-201 | ENST00000453455 | 224 nt | TSL 3 BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | SNRPGP8-201 | ENST00000454064 | 226 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | snoU13.25-201 | ENST00000458945 | 104 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | SNORA18.7-201 | ENST00000516910 | 131 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | AC007751.1-201 | ENST00000529260 | 376 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | DEFB131B-201 | ENST00000530210 | 213 nt | APPRIS P1 TSL 1 (best) BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | MIR3192-201 | ENST00000584920 | 77 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | MIR4295-201 | ENST00000585286 | 85 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | AC008507.4-201 | ENST00000585464 | 127 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | TRAJ36-201 | ENST00000614481 | 58 nt | APPRIS P1 BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | Y_RNA.802-201 | ENST00000614892 | 130 nt | BASIC | 1.08 | □□□□□ -2.24 | | |
| C9 | P02748 | MIR411-201 | ENST00000362239 | 96 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | Y_RNA.116-201 | ENST00000363292 | 103 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | Y_RNA.199-201 | ENST00000364014 | 102 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | RNU1-93P-201 | ENST00000364704 | 169 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | RNU6-144P-201 | ENST00000383951 | 107 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | Y_RNA.486-201 | ENST00000384398 | 107 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | MIR15B-201 | ENST00000385045 | 98 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | MIR136-201 | ENST00000385207 | 82 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | AC087343.1-201 | ENST00000477341 | 475 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | AC068658.1-201 | ENST00000507509 | 388 nt | TSL 2 BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | RNU4-71P-201 | ENST00000516258 | 113 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | MIR4724-201 | ENST00000579485 | 89 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | MIR4452-201 | ENST00000583004 | 71 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | RNU2-4P-201 | ENST00000606190 | 192 nt | BASIC | 1.07 | □□□□□ -2.24 | | |
| C9 | P02748 | MT-ATP8-201 | ENST00000361851 | 207 nt | APPRIS P1 BASIC | 1.06 | □□□□□ -2.24 | | |
| C9 | P02748 | Y_RNA.91-201 | ENST00000363042 | 107 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| C9 | P02748 | Y_RNA.200-201 | ENST00000364018 | 102 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| C9 | P02748 | Y_RNA.257-201 | ENST00000364596 | 102 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| C9 | P02748 | RNU6-1318P-201 | ENST00000365389 | 103 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| C9 | P02748 | SNORD114-22-201 | ENST00000365423 | 72 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| C9 | P02748 | RNU6-484P-201 | ENST00000384016 | 107 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| C9 | P02748 | Y_RNA.476-201 | ENST00000384347 | 108 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| C9 | P02748 | SNORA8.3-201 | ENST00000384679 | 139 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| C9 | P02748 | MIR548A2-201 | ENST00000384956 | 97 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| C9 | P02748 | RNU6-907P-201 | ENST00000390924 | 102 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| C9 | P02748 | Y_RNA.587-201 | ENST00000391210 | 103 nt | BASIC | 1.06 | □□□□□ -2.24 | | |
| C9 | P02748 | Y_RNA.618-201 | ENST00000410949 | 107 nt | BASIC | 1.06 | □□□□□ -2.24 | | |