Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RNA5SP222-201ENST00000411039 105 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 RNU6-847P-201ENST00000411115 108 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.22□□□□□ -2.37
COL4A1P02462 RNU7-152P-201ENST00000458982 64 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 RNU7-141P-201ENST00000459304 62 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 AC010655.3-201ENST00000478818 450 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.22□□□□□ -2.37
COL4A1P02462 RNU6-693P-201ENST00000516134 107 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 MIR3145-201ENST00000580727 82 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 MIR4493-201ENST00000584016 73 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 MTRNR2L2-201ENST00000604882 87 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
COL4A1P02462 Y_RNA.5-201ENST00000362334 102 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 SNORA9.1-201ENST00000362412 131 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RNA5SP98-201ENST00000363158 137 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 Y_RNA.185-201ENST00000363894 100 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 U8.5-201ENST00000364528 136 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RNU6-1040P-201ENST00000383974 107 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RNU6-613P-201ENST00000410412 108 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 Y_RNA.632-201ENST00000459189 102 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RNU6-437P-201ENST00000459408 95 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RNU6-875P-201ENST00000516488 106 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RN7SKP295-201ENST00000517264 153 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.21□□□□□ -2.38
COL4A1P02462 MIR548AO-201ENST00000579992 96 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 MIR4804-201ENST00000581683 73 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 AP001180.6-201ENST00000584918 159 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 SNORD113-5-201ENST00000607261 78 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 SNORD14E-201ENST00000364009 85 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RNU6-1048P-201ENST00000364054 107 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 Y_RNA.439-201ENST00000384119 94 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 SNORD63-201ENST00000384262 68 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 SNORA8.3-201ENST00000384679 139 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 MIR520F-201ENST00000384824 87 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 AL603910.2-201ENST00000407268 136 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RNU4-30P-201ENST00000410245 143 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RNA5SP95-201ENST00000410319 137 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RNU6-994P-201ENST00000410507 111 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.21□□□□□ -2.38
COL4A1P02462 AC236972.2-201ENST00000434979 310 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.21□□□□□ -2.38
COL4A1P02462 AC067940.1-201ENST00000458411 300 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 snoU13.16-201ENST00000459350 104 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RNU7-149P-201ENST00000516739 59 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RNU7-110P-201ENST00000516891 62 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 MIR4667-201ENST00000578933 66 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 AC008507.4-201ENST00000585464 127 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 RPS29P30-201ENST00000600975 111 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 AL080274.1-201ENST00000605565 220 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 AL121655.1-201ENST00000605811 308 ntBASIC0.21□□□□□ -2.38
COL4A1P02462 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.2□□□□□ -2.38
COL4A1P02462 RNU6-369P-201ENST00000362515 102 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 Y_RNA.203-201ENST00000364106 102 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 SNORA36.2-201ENST00000384004 127 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 Y_RNA.424-201ENST00000384063 103 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 RNU6-937P-201ENST00000384325 106 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 Y_RNA.529-201ENST00000384586 119 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 RNU6-383P-201ENST00000410864 94 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 RNU6-602P-201ENST00000411155 105 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 POLR2KP2-201ENST00000438155 177 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 HMGN2P32-201ENST00000444648 269 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 RNU7-67P-201ENST00000459003 62 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.2□□□□□ -2.38
COL4A1P02462 MRPS35P2-201ENST00000508242 191 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 Y_RNA.713-201ENST00000517013 96 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.2□□□□□ -2.38
COL4A1P02462 AC093027.1-201ENST00000546698 429 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 AP000753.3-201ENST00000604083 169 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 AL162730.1-201ENST00000605734 292 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 AC013791.1-201ENST00000616619 62 ntBASIC0.2□□□□□ -2.38
COL4A1P02462 SNORA72.1-201ENST00000363485 129 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 Y_RNA.168-201ENST00000363740 102 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 SNORD18A-201ENST00000363753 72 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 RNU4-50P-201ENST00000364361 141 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 RNU6-364P-201ENST00000384387 107 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 MIR628-201ENST00000385229 95 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 RNU6-679P-201ENST00000391003 106 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 MIR1827-201ENST00000408549 66 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 RBMX2P4-201ENST00000441256 376 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 SNORD11-201ENST00000459124 84 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 AC107297.1-201ENST00000459991 176 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 SNORA25.12-201ENST00000516202 82 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 MIR5093-201ENST00000583199 100 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 RNU6-94P-201ENST00000607728 107 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 MIR548AY-201ENST00000617669 107 ntBASIC0.19□□□□□ -2.38
COL4A1P02462 SNORD44.1-201ENST00000363202 61 ntBASIC0.18□□□□□ -2.38
COL4A1P02462 Y_RNA.252-201ENST00000364556 101 ntBASIC0.18□□□□□ -2.38
COL4A1P02462 RNY3-201ENST00000365484 102 ntBASIC0.18□□□□□ -2.38
COL4A1P02462 Y_RNA.551-201ENST00000384661 102 ntBASIC0.18□□□□□ -2.38
COL4A1P02462 MIR520H-201ENST00000385126 88 ntBASIC0.18□□□□□ -2.38
COL4A1P02462 SNORD72-201ENST00000390994 80 ntBASIC0.18□□□□□ -2.38
COL4A1P02462 RNY4P36-201ENST00000391116 96 ntBASIC0.18□□□□□ -2.38
COL4A1P02462 MIR1468-201ENST00000410600 86 ntBASIC0.18□□□□□ -2.38
COL4A1P02462 AC090844.1-201ENST00000422019 156 ntBASIC0.18□□□□□ -2.38
COL4A1P02462 PMCHL1-202ENST00000423102 261 ntBASIC0.18□□□□□ -2.38
COL4A1P02462 AL160004.2-201ENST00000432935 350 ntBASIC0.18□□□□□ -2.38
COL4A1P02462 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.18□□□□□ -2.38
COL4A1P02462 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.18□□□□□ -2.38
COL4A1P02462 NDUFA4P2-201ENST00000489989 244 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms