Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 MIR1302-9-201ENST00000408365 138 ntBASIC0.39□□□□□ -2.35
MBD3O95983 MIR1302-10-201ENST00000408734 138 ntBASIC0.39□□□□□ -2.35
MBD3O95983 MIR1278-201ENST00000408753 81 ntBASIC0.39□□□□□ -2.35
MBD3O95983 RNU6-1170P-201ENST00000515974 106 ntBASIC0.39□□□□□ -2.35
MBD3O95983 RNU6-191P-201ENST00000516295 94 ntBASIC0.39□□□□□ -2.35
MBD3O95983 SNORD115-40-201ENST00000606510 82 ntBASIC0.39□□□□□ -2.35
MBD3O95983 MIR1302-2-201ENST00000607096 138 ntBASIC0.39□□□□□ -2.35
MBD3O95983 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
MBD3O95983 AL589743.1-201ENST00000551932 2712 ntBASIC0.38□□□□□ -2.35
MBD3O95983 Y_RNA.263-201ENST00000364659 114 ntBASIC0.38□□□□□ -2.35
MBD3O95983 SNORA63.7-201ENST00000365579 123 ntBASIC0.38□□□□□ -2.35
MBD3O95983 RNU6-125P-201ENST00000384505 107 ntBASIC0.38□□□□□ -2.35
MBD3O95983 Y_RNA.547-201ENST00000384654 119 ntBASIC0.38□□□□□ -2.35
MBD3O95983 MTND1P14-201ENST00000427400 950 ntBASIC0.38□□□□□ -2.35
MBD3O95983 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.38□□□□□ -2.35
MBD3O95983 AC087499.4-201ENST00000448505 178 ntBASIC0.38□□□□□ -2.35
MBD3O95983 Y_RNA.661-201ENST00000516003 99 ntBASIC0.38□□□□□ -2.35
MBD3O95983 RNU6-977P-201ENST00000516411 103 ntBASIC0.38□□□□□ -2.35
MBD3O95983 AC040926.1-201ENST00000530195 238 ntBASIC0.38□□□□□ -2.35
MBD3O95983 AL512605.2-201ENST00000592972 256 ntBASIC0.38□□□□□ -2.35
MBD3O95983 AL021707.8-201ENST00000609428 183 ntBASIC0.38□□□□□ -2.35
MBD3O95983 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.38□□□□□ -2.35
MBD3O95983 AC010487.4-201ENST00000637027 61 ntBASIC0.38□□□□□ -2.35
MBD3O95983 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.37□□□□□ -2.35
MBD3O95983 RNU6-1048P-201ENST00000364054 107 ntBASIC0.37□□□□□ -2.35
MBD3O95983 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.37□□□□□ -2.35
MBD3O95983 AC002350.1-201ENST00000490759 375 ntBASIC0.37□□□□□ -2.35
MBD3O95983 RNU6-875P-201ENST00000516488 106 ntBASIC0.37□□□□□ -2.35
MBD3O95983 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
MBD3O95983 C8orf59P2-201ENST00000603441 271 ntBASIC0.37□□□□□ -2.35
MBD3O95983 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
MBD3O95983 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.37□□□□□ -2.35
MBD3O95983 Y_RNA.197-201ENST00000364004 102 ntBASIC0.36□□□□□ -2.35
MBD3O95983 Y_RNA.286-201ENST00000364813 102 ntBASIC0.36□□□□□ -2.35
MBD3O95983 MIR936-201ENST00000401264 98 ntBASIC0.36□□□□□ -2.35
MBD3O95983 RNU6-130P-201ENST00000411112 103 ntBASIC0.36□□□□□ -2.35
MBD3O95983 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
MBD3O95983 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.36□□□□□ -2.35
MBD3O95983 RNU7-73P-201ENST00000458743 63 ntBASIC0.36□□□□□ -2.35
MBD3O95983 RNU6-496P-201ENST00000516145 99 ntBASIC0.36□□□□□ -2.35
MBD3O95983 RNU6-126P-201ENST00000516685 103 ntBASIC0.36□□□□□ -2.35
MBD3O95983 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.36□□□□□ -2.35
MBD3O95983 MIR4662B-201ENST00000579498 81 ntBASIC0.36□□□□□ -2.35
MBD3O95983 MIR4804-201ENST00000581683 73 ntBASIC0.36□□□□□ -2.35
MBD3O95983 LARP7P1-201ENST00000605576 316 ntBASIC0.36□□□□□ -2.35
MBD3O95983 PART1_1.1-201ENST00000611761 217 ntBASIC0.36□□□□□ -2.35
MBD3O95983 MIR18A-201ENST00000362310 71 ntBASIC0.35□□□□□ -2.35
MBD3O95983 RNU6-1205P-201ENST00000363625 106 ntBASIC0.35□□□□□ -2.35
MBD3O95983 Y_RNA.418-201ENST00000384029 102 ntBASIC0.35□□□□□ -2.35
MBD3O95983 MIR520F-201ENST00000384824 87 ntBASIC0.35□□□□□ -2.35
MBD3O95983 MIR520H-201ENST00000385126 88 ntBASIC0.35□□□□□ -2.35
MBD3O95983 MIR548O-201ENST00000408583 114 ntBASIC0.35□□□□□ -2.35
MBD3O95983 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.35□□□□□ -2.35
MBD3O95983 MIR18B-201ENST00000454574 71 ntBASIC0.35□□□□□ -2.35
MBD3O95983 RNU7-56P-201ENST00000458744 62 ntBASIC0.35□□□□□ -2.35
MBD3O95983 RNU6-764P-201ENST00000516396 105 ntBASIC0.35□□□□□ -2.35
MBD3O95983 RNU7-149P-201ENST00000516739 59 ntBASIC0.35□□□□□ -2.35
MBD3O95983 MIR1273G-201ENST00000577677 100 ntBASIC0.35□□□□□ -2.35
MBD3O95983 MIR5688-201ENST00000580619 83 ntBASIC0.35□□□□□ -2.35
MBD3O95983 AC124312.5-201ENST00000604451 268 ntBASIC0.35□□□□□ -2.35
MBD3O95983 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
MBD3O95983 Y_RNA.540-201ENST00000384638 111 ntBASIC0.34□□□□□ -2.36
MBD3O95983 RNU6-1009P-201ENST00000390996 107 ntBASIC0.34□□□□□ -2.36
MBD3O95983 SNORA40.5-201ENST00000391061 128 ntBASIC0.34□□□□□ -2.36
MBD3O95983 MTND4LP30-201ENST00000454092 297 ntBASIC0.34□□□□□ -2.36
MBD3O95983 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC0.34□□□□□ -2.36
MBD3O95983 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.34□□□□□ -2.36
MBD3O95983 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
MBD3O95983 RNU7-25P-201ENST00000516544 62 ntBASIC0.34□□□□□ -2.36
MBD3O95983 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.34□□□□□ -2.36
MBD3O95983 MIR4711-201ENST00000578274 70 ntBASIC0.34□□□□□ -2.36
MBD3O95983 MIR8055-201ENST00000610739 97 ntBASIC0.34□□□□□ -2.36
MBD3O95983 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.34□□□□□ -2.36
MBD3O95983 Y_RNA.80-201ENST00000362996 102 ntBASIC0.33□□□□□ -2.36
MBD3O95983 Y_RNA.183-201ENST00000363882 113 ntBASIC0.33□□□□□ -2.36
MBD3O95983 Y_RNA.315-201ENST00000365117 102 ntBASIC0.33□□□□□ -2.36
MBD3O95983 VTRNA1-3-201ENST00000365645 89 ntBASIC0.33□□□□□ -2.36
MBD3O95983 Y_RNA.485-201ENST00000384395 102 ntBASIC0.33□□□□□ -2.36
MBD3O95983 RNU6-205P-201ENST00000390858 107 ntBASIC0.33□□□□□ -2.36
MBD3O95983 RNU6-308P-201ENST00000390957 107 ntBASIC0.33□□□□□ -2.36
MBD3O95983 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.33□□□□□ -2.36
MBD3O95983 snoU13.21-201ENST00000459368 105 ntBASIC0.33□□□□□ -2.36
MBD3O95983 MIR3612-201ENST00000579753 87 ntBASIC0.33□□□□□ -2.36
MBD3O95983 MIR4676-201ENST00000583078 72 ntBASIC0.33□□□□□ -2.36
MBD3O95983 AC013791.1-201ENST00000616619 62 ntBASIC0.33□□□□□ -2.36
MBD3O95983 MIR6779-201ENST00000617283 64 ntBASIC0.33□□□□□ -2.36
MBD3O95983 AC134878.1-201ENST00000619901 243 ntBASIC0.33□□□□□ -2.36
MBD3O95983 Z97988.1-201ENST00000637697 135 ntBASIC0.33□□□□□ -2.36
MBD3O95983 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
MBD3O95983 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
MBD3O95983 RNU4-90P-201ENST00000362773 141 ntBASIC0.32□□□□□ -2.36
MBD3O95983 SNORD113-8-201ENST00000363497 74 ntBASIC0.32□□□□□ -2.36
MBD3O95983 Y_RNA.395-201ENST00000383945 109 ntBASIC0.32□□□□□ -2.36
MBD3O95983 Y_RNA.445-201ENST00000384168 102 ntBASIC0.32□□□□□ -2.36
MBD3O95983 Y_RNA.529-201ENST00000384586 119 ntBASIC0.32□□□□□ -2.36
MBD3O95983 SNORD38B-201ENST00000384690 67 ntBASIC0.32□□□□□ -2.36
MBD3O95983 RNU6-763P-201ENST00000390865 106 ntBASIC0.32□□□□□ -2.36
MBD3O95983 SNORD115-46-201ENST00000390982 71 ntBASIC0.32□□□□□ -2.36
MBD3O95983 Y_RNA.587-201ENST00000391210 103 ntBASIC0.32□□□□□ -2.36
MBD3O95983 SNORD83.1-201ENST00000411362 77 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 200.4 ms