Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 AC104984.5-201ENST00000586878 94 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 AC027335.2-201ENST00000624030 375 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 AC008133.2-201ENST00000624540 351 ntBASIC1.21□□□□□ -2.22
NKX2-2O95096 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.21□□□□□ -2.22
NKX2-2O95096 RNU6-103P-201ENST00000363686 107 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 RNA5SP99-201ENST00000364020 114 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 RNY1-201ENST00000364228 113 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 Y_RNA.363-201ENST00000365529 113 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
NKX2-2O95096 RNU6-910P-201ENST00000390844 107 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 SNORD12-201ENST00000391002 90 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 SNORA26-201ENST00000391286 122 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.2□□□□□ -2.22
NKX2-2O95096 RPS29P29-201ENST00000456396 171 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 RNU6-365P-201ENST00000517113 106 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 SNORA70.22-201ENST00000517160 124 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 RNU7-181P-201ENST00000517234 74 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 AC007751.1-201ENST00000529260 376 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 DNAJC19P9-201ENST00000555084 351 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 AL160236.1-201ENST00000556317 195 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 AC097639.2-201ENST00000603159 172 ntBASIC1.2□□□□□ -2.22
NKX2-2O95096 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
NKX2-2O95096 Y_RNA.65-201ENST00000362846 100 ntBASIC1.19□□□□□ -2.22
NKX2-2O95096 RNU6-888P-201ENST00000363010 101 ntBASIC1.19□□□□□ -2.22
NKX2-2O95096 SNORA20.1-201ENST00000364790 130 ntBASIC1.19□□□□□ -2.22
NKX2-2O95096 Y_RNA.432-201ENST00000384087 111 ntBASIC1.19□□□□□ -2.22
NKX2-2O95096 MIR548A2-201ENST00000384956 97 ntBASIC1.19□□□□□ -2.22
NKX2-2O95096 RNU6-482P-201ENST00000391068 107 ntBASIC1.19□□□□□ -2.22
NKX2-2O95096 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
NKX2-2O95096 SNRPGP8-201ENST00000454064 226 ntBASIC1.19□□□□□ -2.22
NKX2-2O95096 SNORD79.1-201ENST00000516069 84 ntBASIC1.19□□□□□ -2.22
NKX2-2O95096 Y_RNA.66-201ENST00000362862 102 ntBASIC1.18□□□□□ -2.22
NKX2-2O95096 RNA5SP264-201ENST00000363115 107 ntBASIC1.18□□□□□ -2.22
NKX2-2O95096 Y_RNA.370-201ENST00000365589 108 ntBASIC1.18□□□□□ -2.22
NKX2-2O95096 SNORD61-201ENST00000384252 73 ntBASIC1.18□□□□□ -2.22
NKX2-2O95096 Y_RNA.537-201ENST00000384626 109 ntBASIC1.18□□□□□ -2.22
NKX2-2O95096 MIR518F-201ENST00000384973 87 ntBASIC1.18□□□□□ -2.22
NKX2-2O95096 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.18□□□□□ -2.22
NKX2-2O95096 Y_RNA.626-201ENST00000411288 95 ntBASIC1.18□□□□□ -2.22
NKX2-2O95096 RNU2-13P-201ENST00000515909 113 ntBASIC1.18□□□□□ -2.22
NKX2-2O95096 RNU6-504P-201ENST00000516568 104 ntBASIC1.18□□□□□ -2.22
NKX2-2O95096 RNU6-111P-201ENST00000517179 105 ntBASIC1.18□□□□□ -2.22
NKX2-2O95096 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.18□□□□□ -2.22
NKX2-2O95096 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.17□□□□□ -2.22
NKX2-2O95096 SNORD45.3-201ENST00000363836 72 ntBASIC1.17□□□□□ -2.22
NKX2-2O95096 SNORD115-28-201ENST00000363931 81 ntBASIC1.17□□□□□ -2.22
NKX2-2O95096 Y_RNA.634-201ENST00000364811 113 ntBASIC1.17□□□□□ -2.22
NKX2-2O95096 SNORA25.8-201ENST00000364831 128 ntBASIC1.17□□□□□ -2.22
NKX2-2O95096 SNORA80D-201ENST00000384488 135 ntBASIC1.17□□□□□ -2.22
NKX2-2O95096 RNU6-1067P-201ENST00000384752 107 ntBASIC1.17□□□□□ -2.22
NKX2-2O95096 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
NKX2-2O95096 Y_RNA.622-201ENST00000411091 108 ntBASIC1.17□□□□□ -2.22
NKX2-2O95096 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.17□□□□□ -2.22
NKX2-2O95096 AC087499.4-201ENST00000448505 178 ntBASIC1.17□□□□□ -2.22
NKX2-2O95096 RPS26P48-201ENST00000491713 339 ntBASIC1.17□□□□□ -2.22
NKX2-2O95096 RNU6-693P-201ENST00000516134 107 ntBASIC1.17□□□□□ -2.22
NKX2-2O95096 MIR4251-201ENST00000635819 61 ntBASIC1.17□□□□□ -2.22
NKX2-2O95096 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
NKX2-2O95096 Y_RNA.91-201ENST00000363042 107 ntBASIC1.16□□□□□ -2.22
NKX2-2O95096 SNORA7.1-201ENST00000363750 139 ntBASIC1.16□□□□□ -2.22
NKX2-2O95096 RNU4-43P-201ENST00000410628 137 ntBASIC1.16□□□□□ -2.22
NKX2-2O95096 RNU2-70P-201ENST00000410718 179 ntBASIC1.16□□□□□ -2.22
NKX2-2O95096 RNU6-847P-201ENST00000411115 108 ntBASIC1.16□□□□□ -2.22
NKX2-2O95096 AP1B1P2-201ENST00000416196 106 ntBASIC1.16□□□□□ -2.22
NKX2-2O95096 AC009474.2-201ENST00000451383 136 ntBASIC1.16□□□□□ -2.22
NKX2-2O95096 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
NKX2-2O95096 AC109810.1-201ENST00000534066 224 ntBASIC1.16□□□□□ -2.22
NKX2-2O95096 MIR4744-201ENST00000581563 82 ntBASIC1.16□□□□□ -2.22
NKX2-2O95096 AP000942.3-201ENST00000603702 160 ntBASIC1.16□□□□□ -2.22
NKX2-2O95096 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
NKX2-2O95096 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NKX2-2O95096 MIR103A2-201ENST00000362154 78 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-34-201ENST00000362441 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-12-201ENST00000362583 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-29-201ENST00000362834 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-9-201ENST00000362912 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-21-201ENST00000362963 81 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-14-201ENST00000363090 81 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 Y_RNA.121-201ENST00000363309 113 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-13-201ENST00000363358 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-41-201ENST00000363608 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-11-201ENST00000363616 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-5-201ENST00000363633 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-39-201ENST00000363694 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-4-201ENST00000363810 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-16-201ENST00000363887 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-6-201ENST00000363942 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 Y_RNA.199-201ENST00000364014 102 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-42-201ENST00000364273 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-15-201ENST00000364809 81 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-1-201ENST00000364961 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 Y_RNA.308-201ENST00000365043 101 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-26-201ENST00000365067 82 ntBASIC1.15□□□□□ -2.23
NKX2-2O95096 SNORD115-10-201ENST00000365073 81 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms