Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 AC082651.2-201ENST00000496833 166 ntBASIC0.38□□□□□ -2.35
UPK3AO75631 RNU6-977P-201ENST00000516411 103 ntBASIC0.38□□□□□ -2.35
UPK3AO75631 RNU7-25P-201ENST00000516544 62 ntBASIC0.38□□□□□ -2.35
UPK3AO75631 MIR4771-2-201ENST00000577758 74 ntBASIC0.38□□□□□ -2.35
UPK3AO75631 MIR4771-1-201ENST00000582617 74 ntBASIC0.38□□□□□ -2.35
UPK3AO75631 uc_338.4-201ENST00000616635 176 ntBASIC0.38□□□□□ -2.35
UPK3AO75631 AC007485.1-201ENST00000616755 206 ntBASIC0.38□□□□□ -2.35
UPK3AO75631 AC112487.2-201ENST00000637950 304 ntBASIC0.38□□□□□ -2.35
UPK3AO75631 RNU6-1205P-201ENST00000363625 106 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 Y_RNA.263-201ENST00000364659 114 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 Y_RNA.418-201ENST00000384029 102 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 Y_RNA.547-201ENST00000384654 119 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 MIR573-201ENST00000384964 99 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 MIR140-201ENST00000385282 100 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 MIR548O-201ENST00000408583 114 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 Y_RNA.602-201ENST00000410535 92 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 AC107297.1-201ENST00000459991 176 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 RNU2-13P-201ENST00000515909 113 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 RNU6-507P-201ENST00000516045 100 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 MIR4264-201ENST00000583520 66 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 MIR924-201ENST00000638017 53 ntBASIC0.37□□□□□ -2.35
UPK3AO75631 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.37□□□□□ -2.35
UPK3AO75631 SNORD113-8-201ENST00000363497 74 ntBASIC0.36□□□□□ -2.35
UPK3AO75631 RNU6-580P-201ENST00000365159 107 ntBASIC0.36□□□□□ -2.35
UPK3AO75631 RNU6-763P-201ENST00000390865 106 ntBASIC0.36□□□□□ -2.35
UPK3AO75631 Y_RNA.579-201ENST00000390939 94 ntBASIC0.36□□□□□ -2.35
UPK3AO75631 RNA5SP193-201ENST00000410353 107 ntBASIC0.36□□□□□ -2.35
UPK3AO75631 RNU7-67P-201ENST00000459003 62 ntBASIC0.36□□□□□ -2.35
UPK3AO75631 MIR376A1-201ENST00000616574 68 ntBASIC0.36□□□□□ -2.35
UPK3AO75631 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
UPK3AO75631 Y_RNA.197-201ENST00000364004 102 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 Y_RNA.241-201ENST00000364470 117 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 Y_RNA.424-201ENST00000384063 103 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 RNU6-102P-201ENST00000384485 104 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 RNU6-383P-201ENST00000410864 94 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 RNU6-177P-201ENST00000411257 104 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 AC090844.1-201ENST00000422019 156 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.35□□□□□ -2.35
UPK3AO75631 RNU6-1170P-201ENST00000515974 106 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 RNU6-475P-201ENST00000516073 104 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 RNU6-397P-201ENST00000516226 104 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 RNU6-764P-201ENST00000516396 105 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 RNU7-149P-201ENST00000516739 59 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 AC134878.1-201ENST00000619901 243 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 AC022140.2-201ENST00000623500 188 ntBASIC0.35□□□□□ -2.35
UPK3AO75631 Y_RNA.222-201ENST00000364264 102 ntBASIC0.34□□□□□ -2.36
UPK3AO75631 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
UPK3AO75631 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
UPK3AO75631 MIR1302-11-201ENST00000408051 138 ntBASIC0.34□□□□□ -2.36
UPK3AO75631 MIR1302-9-201ENST00000408365 138 ntBASIC0.34□□□□□ -2.36
UPK3AO75631 MIR1302-10-201ENST00000408734 138 ntBASIC0.34□□□□□ -2.36
UPK3AO75631 RNU7-62P-201ENST00000458856 62 ntBASIC0.34□□□□□ -2.36
UPK3AO75631 snoU13.16-201ENST00000459350 104 ntBASIC0.34□□□□□ -2.36
UPK3AO75631 MRPS35P2-201ENST00000508242 191 ntBASIC0.34□□□□□ -2.36
UPK3AO75631 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
UPK3AO75631 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.34□□□□□ -2.36
UPK3AO75631 AL049861.1-201ENST00000603130 150 ntBASIC0.34□□□□□ -2.36
UPK3AO75631 LARP7P1-201ENST00000605576 316 ntBASIC0.34□□□□□ -2.36
UPK3AO75631 AL162730.1-201ENST00000605734 292 ntBASIC0.34□□□□□ -2.36
UPK3AO75631 MIR1302-2-201ENST00000607096 138 ntBASIC0.34□□□□□ -2.36
UPK3AO75631 Y_RNA.14-201ENST00000362415 103 ntBASIC0.33□□□□□ -2.36
UPK3AO75631 RNU4-45P-201ENST00000365469 141 ntBASIC0.33□□□□□ -2.36
UPK3AO75631 RNU6-144P-201ENST00000383951 107 ntBASIC0.33□□□□□ -2.36
UPK3AO75631 Y_RNA.494-201ENST00000384432 111 ntBASIC0.33□□□□□ -2.36
UPK3AO75631 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
UPK3AO75631 Y_RNA.666-201ENST00000516187 112 ntBASIC0.33□□□□□ -2.36
UPK3AO75631 RNU6-958P-201ENST00000516995 106 ntBASIC0.33□□□□□ -2.36
UPK3AO75631 MIR3612-201ENST00000579753 87 ntBASIC0.33□□□□□ -2.36
UPK3AO75631 MIR4804-201ENST00000581683 73 ntBASIC0.33□□□□□ -2.36
UPK3AO75631 C8orf59P2-201ENST00000603441 271 ntBASIC0.33□□□□□ -2.36
UPK3AO75631 AL355297.3-201ENST00000604082 446 ntBASIC0.33□□□□□ -2.36
UPK3AO75631 MIR367-201ENST00000362299 68 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 MIR18A-201ENST00000362310 71 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 Y_RNA.136-201ENST00000363444 102 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 RNA5SP325-201ENST00000363756 130 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 Y_RNA.445-201ENST00000384168 102 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 Y_RNA.569-201ENST00000384749 103 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 MTCO2P12-201ENST00000427426 682 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 MTCO1P5-201ENST00000433573 344 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 MTND5P20-201ENST00000448677 143 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 HSPE1P25-201ENST00000455484 251 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 MIR4676-201ENST00000583078 72 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 MIR4795-201ENST00000584182 89 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 AC124312.5-201ENST00000604451 268 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 AC020891.4-201ENST00000605745 93 ntBASIC0.32□□□□□ -2.36
UPK3AO75631 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-34-201ENST00000362441 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-12-201ENST00000362583 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 RNU4-90P-201ENST00000362773 141 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-29-201ENST00000362834 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-9-201ENST00000362912 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-21-201ENST00000362963 81 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-14-201ENST00000363090 81 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-13-201ENST00000363358 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-41-201ENST00000363608 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-11-201ENST00000363616 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-5-201ENST00000363633 82 ntBASIC0.31□□□□□ -2.36
UPK3AO75631 SNORD115-39-201ENST00000363694 82 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms