Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.95□□□□□ -2.26
SNX3O60493 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.95□□□□□ -2.26
SNX3O60493 MIR4662B-201ENST00000579498 81 ntBASIC0.95□□□□□ -2.26
SNX3O60493 AP000942.3-201ENST00000603702 160 ntBASIC0.95□□□□□ -2.26
SNX3O60493 MIR4791-201ENST00000607666 84 ntBASIC0.95□□□□□ -2.26
SNX3O60493 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
SNX3O60493 Y_RNA.133-201ENST00000363428 110 ntBASIC0.94□□□□□ -2.26
SNX3O60493 Y_RNA.352-201ENST00000365439 102 ntBASIC0.94□□□□□ -2.26
SNX3O60493 SNORA51.10-201ENST00000384418 136 ntBASIC0.94□□□□□ -2.26
SNX3O60493 Y_RNA.537-201ENST00000384626 109 ntBASIC0.94□□□□□ -2.26
SNX3O60493 RNU6-1067P-201ENST00000384752 107 ntBASIC0.94□□□□□ -2.26
SNX3O60493 MT-TT-201ENST00000387460 66 ntBASIC0.94□□□□□ -2.26
SNX3O60493 RNU2-38P-201ENST00000410856 79 ntBASIC0.94□□□□□ -2.26
SNX3O60493 AP1B1P2-201ENST00000416196 106 ntBASIC0.94□□□□□ -2.26
SNX3O60493 AL392103.1-201ENST00000447000 198 ntBASIC0.94□□□□□ -2.26
SNX3O60493 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.94□□□□□ -2.26
SNX3O60493 AC109810.1-201ENST00000534066 224 ntBASIC0.94□□□□□ -2.26
SNX3O60493 Y_RNA.54-201ENST00000362766 105 ntBASIC0.93□□□□□ -2.26
SNX3O60493 snoU2_19.4-201ENST00000364329 80 ntBASIC0.93□□□□□ -2.26
SNX3O60493 Y_RNA.277-201ENST00000364754 102 ntBASIC0.93□□□□□ -2.26
SNX3O60493 Y_RNA.304-201ENST00000365011 112 ntBASIC0.93□□□□□ -2.26
SNX3O60493 MIR568-201ENST00000385036 95 ntBASIC0.93□□□□□ -2.26
SNX3O60493 RNU6-847P-201ENST00000411115 108 ntBASIC0.93□□□□□ -2.26
SNX3O60493 RNU2-13P-201ENST00000515909 113 ntBASIC0.93□□□□□ -2.26
SNX3O60493 SCARNA8-201ENST00000515924 131 ntBASIC0.93□□□□□ -2.26
SNX3O60493 RNU6-453P-201ENST00000516819 85 ntBASIC0.93□□□□□ -2.26
SNX3O60493 AC023827.1-201ENST00000569247 97 ntBASIC0.93□□□□□ -2.26
SNX3O60493 MIR4781-201ENST00000585250 76 ntBASIC0.93□□□□□ -2.26
SNX3O60493 AL365265.1-201ENST00000621045 234 ntBASIC0.93□□□□□ -2.26
SNX3O60493 MTND1P7-201ENST00000632801 297 ntBASIC0.93□□□□□ -2.26
SNX3O60493 Y_RNA.162-201ENST00000363683 102 ntBASIC0.92□□□□□ -2.26
SNX3O60493 Y_RNA.416-201ENST00000384014 113 ntBASIC0.92□□□□□ -2.26
SNX3O60493 Y_RNA.494-201ENST00000384432 111 ntBASIC0.92□□□□□ -2.26
SNX3O60493 MIR548A2-201ENST00000384956 97 ntBASIC0.92□□□□□ -2.26
SNX3O60493 MIR518F-201ENST00000384973 87 ntBASIC0.92□□□□□ -2.26
SNX3O60493 BTF3P4-201ENST00000418852 495 ntBASIC0.92□□□□□ -2.26
SNX3O60493 MTCYBP9-201ENST00000431021 303 ntBASIC0.92□□□□□ -2.26
SNX3O60493 SNORD127-201ENST00000458892 86 ntBASIC0.92□□□□□ -2.26
SNX3O60493 Y_RNA.638-201ENST00000459374 113 ntBASIC0.92□□□□□ -2.26
SNX3O60493 RNU6-693P-201ENST00000516134 107 ntBASIC0.92□□□□□ -2.26
SNX3O60493 RNU11-2P-201ENST00000516898 142 ntBASIC0.92□□□□□ -2.26
SNX3O60493 RNU6-365P-201ENST00000517113 106 ntBASIC0.92□□□□□ -2.26
SNX3O60493 MIR548AO-201ENST00000579992 96 ntBASIC0.92□□□□□ -2.26
SNX3O60493 AC131055.1-201ENST00000584626 316 ntBASIC0.92□□□□□ -2.26
SNX3O60493 HSPE1P19-201ENST00000603327 295 ntBASIC0.92□□□□□ -2.26
SNX3O60493 AL157834.3-201ENST00000615543 103 ntBASIC0.92□□□□□ -2.26
SNX3O60493 AC243994.1-201ENST00000618627 109 ntBASIC0.92□□□□□ -2.26
SNX3O60493 MIR6516-201ENST00000630554 81 ntBASIC0.92□□□□□ -2.26
SNX3O60493 Y_RNA.76-201ENST00000362931 109 ntBASIC0.91□□□□□ -2.26
SNX3O60493 SNORD115-28-201ENST00000363931 81 ntBASIC0.91□□□□□ -2.26
SNX3O60493 RNU6-654P-201ENST00000364373 107 ntBASIC0.91□□□□□ -2.26
SNX3O60493 Y_RNA.288-201ENST00000364854 92 ntBASIC0.91□□□□□ -2.26
SNX3O60493 SNORD114-24-201ENST00000365029 72 ntBASIC0.91□□□□□ -2.26
SNX3O60493 RNU6-484P-201ENST00000384016 107 ntBASIC0.91□□□□□ -2.26
SNX3O60493 SNORD61-201ENST00000384252 73 ntBASIC0.91□□□□□ -2.26
SNX3O60493 MIR200A-201ENST00000384875 90 ntBASIC0.91□□□□□ -2.26
SNX3O60493 RNU6-482P-201ENST00000391068 107 ntBASIC0.91□□□□□ -2.26
SNX3O60493 RNU6-938P-201ENST00000411285 103 ntBASIC0.91□□□□□ -2.26
SNX3O60493 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.91□□□□□ -2.26
SNX3O60493 RNU6-1045P-201ENST00000516321 107 ntBASIC0.91□□□□□ -2.26
SNX3O60493 RNU6-1270P-201ENST00000517128 108 ntBASIC0.91□□□□□ -2.26
SNX3O60493 MIR4719-201ENST00000585233 84 ntBASIC0.91□□□□□ -2.26
SNX3O60493 MIR6078-201ENST00000611069 100 ntBASIC0.91□□□□□ -2.26
SNX3O60493 AL391516.1-201ENST00000554380 2449 ntBASIC0.9□□□□□ -2.26
SNX3O60493 MIR378A-201ENST00000362177 66 ntBASIC0.9□□□□□ -2.27
SNX3O60493 Y_RNA.91-201ENST00000363042 107 ntBASIC0.9□□□□□ -2.27
SNX3O60493 RNU6-653P-201ENST00000363074 106 ntBASIC0.9□□□□□ -2.27
SNX3O60493 RNA5SP99-201ENST00000364020 114 ntBASIC0.9□□□□□ -2.27
SNX3O60493 Y_RNA.241-201ENST00000364470 117 ntBASIC0.9□□□□□ -2.27
SNX3O60493 SNORD24-201ENST00000383884 75 ntBASIC0.9□□□□□ -2.27
SNX3O60493 MIR616-201ENST00000385293 97 ntBASIC0.9□□□□□ -2.27
SNX3O60493 MIR942-201ENST00000401111 86 ntBASIC0.9□□□□□ -2.27
SNX3O60493 AL606845.1-201ENST00000404881 255 ntBASIC0.9□□□□□ -2.27
SNX3O60493 Y_RNA.622-201ENST00000411091 108 ntBASIC0.9□□□□□ -2.27
SNX3O60493 SNRPGP8-201ENST00000454064 226 ntBASIC0.9□□□□□ -2.27
SNX3O60493 RNU6-1299P-201ENST00000516316 100 ntBASIC0.9□□□□□ -2.27
SNX3O60493 RNU6-126P-201ENST00000516685 103 ntBASIC0.9□□□□□ -2.27
SNX3O60493 AC011921.3-201ENST00000605540 361 ntBASIC0.9□□□□□ -2.27
SNX3O60493 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.9□□□□□ -2.27
SNX3O60493 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-34-201ENST00000362441 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-12-201ENST00000362583 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 Y_RNA.37-201ENST00000362606 108 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-29-201ENST00000362834 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 Y_RNA.66-201ENST00000362862 102 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-9-201ENST00000362912 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-21-201ENST00000362963 81 ntBASIC0.89□□□□□ -2.27
SNX3O60493 RNU6-888P-201ENST00000363010 101 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-14-201ENST00000363090 81 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-13-201ENST00000363358 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-41-201ENST00000363608 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-11-201ENST00000363616 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-5-201ENST00000363633 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-39-201ENST00000363694 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-4-201ENST00000363810 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-16-201ENST00000363887 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-6-201ENST00000363942 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-42-201ENST00000364273 82 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-15-201ENST00000364809 81 ntBASIC0.89□□□□□ -2.27
SNX3O60493 SNORD115-1-201ENST00000364961 82 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms