Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNU6-1132P-201ENST00000459214 107 ntBASIC1.14□□□□□ -2.23
SSX4O60224 BX284668.6-201ENST00000606899 438 ntBASIC1.14□□□□□ -2.23
SSX4O60224 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.14□□□□□ -2.23
SSX4O60224 AL365265.1-201ENST00000621045 234 ntBASIC1.14□□□□□ -2.23
SSX4O60224 Y_RNA.304-201ENST00000365011 112 ntBASIC1.13□□□□□ -2.23
SSX4O60224 MIR222-201ENST00000384992 110 ntBASIC1.13□□□□□ -2.23
SSX4O60224 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
SSX4O60224 MIR548H3-201ENST00000408771 118 ntBASIC1.13□□□□□ -2.23
SSX4O60224 Y_RNA.666-201ENST00000516187 112 ntBASIC1.13□□□□□ -2.23
SSX4O60224 Y_RNA.668-201ENST00000516233 93 ntBASIC1.13□□□□□ -2.23
SSX4O60224 MIR4452-201ENST00000583004 71 ntBASIC1.13□□□□□ -2.23
SSX4O60224 AC027335.2-201ENST00000624030 375 ntBASIC1.13□□□□□ -2.23
SSX4O60224 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.13□□□□□ -2.23
SSX4O60224 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
SSX4O60224 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.12□□□□□ -2.23
SSX4O60224 Y_RNA.76-201ENST00000362931 109 ntBASIC1.12□□□□□ -2.23
SSX4O60224 Y_RNA.416-201ENST00000384014 113 ntBASIC1.12□□□□□ -2.23
SSX4O60224 Y_RNA.486-201ENST00000384398 107 ntBASIC1.12□□□□□ -2.23
SSX4O60224 Y_RNA.562-201ENST00000384695 113 ntBASIC1.12□□□□□ -2.23
SSX4O60224 MIR548O-201ENST00000408583 114 ntBASIC1.12□□□□□ -2.23
SSX4O60224 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
SSX4O60224 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.12□□□□□ -2.23
SSX4O60224 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.12□□□□□ -2.23
SSX4O60224 COX6CP14-201ENST00000469580 174 ntBASIC1.12□□□□□ -2.23
SSX4O60224 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.12□□□□□ -2.23
SSX4O60224 RNU4-57P-201ENST00000515980 135 ntBASIC1.12□□□□□ -2.23
SSX4O60224 RNU7-25P-201ENST00000516544 62 ntBASIC1.12□□□□□ -2.23
SSX4O60224 RNU7-181P-201ENST00000517234 74 ntBASIC1.12□□□□□ -2.23
SSX4O60224 MIR4662B-201ENST00000579498 81 ntBASIC1.12□□□□□ -2.23
SSX4O60224 AL078603.1-201ENST00000603824 313 ntBASIC1.12□□□□□ -2.23
SSX4O60224 PRELID3BP2-201ENST00000605362 201 ntBASIC1.12□□□□□ -2.23
SSX4O60224 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
SSX4O60224 snoU2_19.4-201ENST00000364329 80 ntBASIC1.11□□□□□ -2.23
SSX4O60224 Y_RNA.547-201ENST00000384654 119 ntBASIC1.11□□□□□ -2.23
SSX4O60224 MT-TT-201ENST00000387460 66 ntBASIC1.11□□□□□ -2.23
SSX4O60224 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.11□□□□□ -2.23
SSX4O60224 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.11□□□□□ -2.23
SSX4O60224 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
SSX4O60224 SNORD116-28-201ENST00000516123 91 ntBASIC1.11□□□□□ -2.23
SSX4O60224 RN7SKP179-201ENST00000516126 217 ntBASIC1.11□□□□□ -2.23
SSX4O60224 RNU7-40P-201ENST00000516397 64 ntBASIC1.11□□□□□ -2.23
SSX4O60224 AL442067.1-201ENST00000613261 223 ntBASIC1.11□□□□□ -2.23
SSX4O60224 AC008133.2-201ENST00000624540 351 ntBASIC1.11□□□□□ -2.23
SSX4O60224 RNA5SP264-201ENST00000363115 107 ntBASIC1.1□□□□□ -2.23
SSX4O60224 SNORA25.3-201ENST00000363205 127 ntBASIC1.1□□□□□ -2.23
SSX4O60224 SNORD27-201ENST00000363981 72 ntBASIC1.1□□□□□ -2.23
SSX4O60224 Y_RNA.292-201ENST00000364904 97 ntBASIC1.1□□□□□ -2.23
SSX4O60224 Y_RNA.477-201ENST00000384352 108 ntBASIC1.1□□□□□ -2.23
SSX4O60224 MIR570-201ENST00000384917 97 ntBASIC1.1□□□□□ -2.23
SSX4O60224 MIR618-201ENST00000385287 98 ntBASIC1.1□□□□□ -2.23
SSX4O60224 snoU13.18-201ENST00000459483 104 ntBASIC1.1□□□□□ -2.23
SSX4O60224 RPS26P48-201ENST00000491713 339 ntBASIC1.1□□□□□ -2.23
SSX4O60224 SCARNA8-201ENST00000515924 131 ntBASIC1.1□□□□□ -2.23
SSX4O60224 RNU6-453P-201ENST00000516819 85 ntBASIC1.1□□□□□ -2.23
SSX4O60224 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
SSX4O60224 U4.1-201ENST00000620349 87 ntBASIC1.1□□□□□ -2.23
SSX4O60224 RNU6-653P-201ENST00000363074 106 ntBASIC1.09□□□□□ -2.23
SSX4O60224 RNA5SP48-201ENST00000363969 126 ntBASIC1.09□□□□□ -2.23
SSX4O60224 RNU6-196P-201ENST00000384315 107 ntBASIC1.09□□□□□ -2.23
SSX4O60224 SNORA80D-201ENST00000384488 135 ntBASIC1.09□□□□□ -2.23
SSX4O60224 SNORA40.6-201ENST00000391153 128 ntBASIC1.09□□□□□ -2.23
SSX4O60224 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
SSX4O60224 AC004223.1-201ENST00000479840 271 ntBASIC1.09□□□□□ -2.23
SSX4O60224 MTND1P19-201ENST00000511780 315 ntBASIC1.09□□□□□ -2.23
SSX4O60224 AP003716.2-201ENST00000528260 108 ntBASIC1.09□□□□□ -2.23
SSX4O60224 MIR4503-201ENST00000582187 83 ntBASIC1.09□□□□□ -2.23
SSX4O60224 AC011921.3-201ENST00000605540 361 ntBASIC1.09□□□□□ -2.23
SSX4O60224 AC062037.2-201ENST00000610137 73 ntBASIC1.09□□□□□ -2.23
SSX4O60224 MIR6734-201ENST00000621166 68 ntBASIC1.09□□□□□ -2.23
SSX4O60224 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
SSX4O60224 MIR103A2-201ENST00000362154 78 ntBASIC1.08□□□□□ -2.24
SSX4O60224 Y_RNA.262-201ENST00000364641 102 ntBASIC1.08□□□□□ -2.24
SSX4O60224 SNORA1.2-201ENST00000365189 134 ntBASIC1.08□□□□□ -2.24
SSX4O60224 Y_RNA.350-201ENST00000365409 98 ntBASIC1.08□□□□□ -2.24
SSX4O60224 SNORD114-22-201ENST00000365423 72 ntBASIC1.08□□□□□ -2.24
SSX4O60224 Y_RNA.370-201ENST00000365589 108 ntBASIC1.08□□□□□ -2.24
SSX4O60224 MIR616-201ENST00000385293 97 ntBASIC1.08□□□□□ -2.24
SSX4O60224 SNORA75.2-201ENST00000391138 150 ntBASIC1.08□□□□□ -2.24
SSX4O60224 SNORA75.3-201ENST00000391231 150 ntBASIC1.08□□□□□ -2.24
SSX4O60224 AL606845.1-201ENST00000404881 255 ntBASIC1.08□□□□□ -2.24
SSX4O60224 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.08□□□□□ -2.24
SSX4O60224 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.08□□□□□ -2.24
SSX4O60224 AC007751.1-201ENST00000529260 376 ntBASIC1.08□□□□□ -2.24
SSX4O60224 SNORA4-201ENST00000584302 138 ntBASIC1.08□□□□□ -2.24
SSX4O60224 MIR4251-201ENST00000635819 61 ntBASIC1.08□□□□□ -2.24
SSX4O60224 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SSX4O60224 Y_RNA.65-201ENST00000362846 100 ntBASIC1.07□□□□□ -2.24
SSX4O60224 RNY3P5-201ENST00000384127 102 ntBASIC1.07□□□□□ -2.24
SSX4O60224 RNU6-42P-201ENST00000384165 107 ntBASIC1.07□□□□□ -2.24
SSX4O60224 RNU6-574P-201ENST00000384265 107 ntBASIC1.07□□□□□ -2.24
SSX4O60224 Y_RNA.539-201ENST00000384635 107 ntBASIC1.07□□□□□ -2.24
SSX4O60224 RNU6-1067P-201ENST00000384752 107 ntBASIC1.07□□□□□ -2.24
SSX4O60224 MIR489-201ENST00000384923 84 ntBASIC1.07□□□□□ -2.24
SSX4O60224 SNORD12-201ENST00000391002 90 ntBASIC1.07□□□□□ -2.24
SSX4O60224 RNU6-381P-201ENST00000391259 108 ntBASIC1.07□□□□□ -2.24
SSX4O60224 MIR1185-1-201ENST00000408598 86 ntBASIC1.07□□□□□ -2.24
SSX4O60224 Y_RNA.622-201ENST00000411091 108 ntBASIC1.07□□□□□ -2.24
SSX4O60224 AL591704.2-201ENST00000421658 181 ntBASIC1.07□□□□□ -2.24
SSX4O60224 AC063976.4-201ENST00000421971 163 ntBASIC1.07□□□□□ -2.24
SSX4O60224 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms