Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 RNU6-1186P-201ENST00000410429 97 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 SUMO1P4-201ENST00000429430 302 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 AC233266.1-201ENST00000454518 96 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.3□□□□□ -2.04
FOXN1O15353 AC090255.1-201ENST00000495779 349 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 AC093259.1-201ENST00000509755 300 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 Y_RNA.666-201ENST00000516187 112 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 RPPH1-2P-201ENST00000516688 293 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 RNU6-1270P-201ENST00000517128 108 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 AC024614.2-201ENST00000577584 372 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 AC242852.1-201ENST00000612151 96 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 MIR5739-201ENST00000619803 80 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 AC244015.1-201ENST00000622301 99 ntBASIC2.3□□□□□ -2.04
FOXN1O15353 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.29□□□□□ -2.04
FOXN1O15353 RNA5SP125-201ENST00000364843 120 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 Y_RNA.549-201ENST00000384657 102 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 MIR520G-201ENST00000385064 90 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 AC123900.1-201ENST00000420390 96 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 SNRPGP10-201ENST00000432323 225 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 HMGN2P34-201ENST00000437647 269 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 HMGN1P7-201ENST00000491722 313 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 SNORA4.4-201ENST00000515921 135 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 RNU6-412P-201ENST00000516434 106 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 RNU6-1291P-201ENST00000516591 104 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 RNU6-1149P-201ENST00000516810 97 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 RNU6-856P-201ENST00000516959 98 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 MIR5089-201ENST00000580047 84 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 AC084768.2-201ENST00000622736 221 ntBASIC2.29□□□□□ -2.04
FOXN1O15353 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
FOXN1O15353 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
FOXN1O15353 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
FOXN1O15353 RNU6-888P-201ENST00000363010 101 ntBASIC2.28□□□□□ -2.04
FOXN1O15353 RNU1-23P-201ENST00000363361 144 ntBASIC2.28□□□□□ -2.04
FOXN1O15353 Y_RNA.253-201ENST00000364562 112 ntBASIC2.28□□□□□ -2.04
FOXN1O15353 Y_RNA.332-201ENST00000365271 113 ntBASIC2.28□□□□□ -2.04
FOXN1O15353 Y_RNA.366-201ENST00000365540 102 ntBASIC2.28□□□□□ -2.04
FOXN1O15353 RNU6-905P-201ENST00000384434 107 ntBASIC2.28□□□□□ -2.04
FOXN1O15353 MIR548A2-201ENST00000384956 97 ntBASIC2.28□□□□□ -2.04
FOXN1O15353 SNORD12C-201ENST00000386307 89 ntBASIC2.28□□□□□ -2.04
FOXN1O15353 SNORD77.3-201ENST00000391113 65 ntBASIC2.28□□□□□ -2.04
FOXN1O15353 RNU1-123P-201ENST00000458950 160 ntBASIC2.28□□□□□ -2.04
FOXN1O15353 RNU6-693P-201ENST00000516134 107 ntBASIC2.28□□□□□ -2.04
FOXN1O15353 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.28□□□□□ -2.04
FOXN1O15353 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.28□□□□□ -2.04
FOXN1O15353 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
FOXN1O15353 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.28□□□□□ -2.04
FOXN1O15353 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.27□□□□□ -2.05
FOXN1O15353 Y_RNA.30-201ENST00000362572 97 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 Y_RNA.85-201ENST00000363014 111 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 Y_RNA.348-201ENST00000365403 103 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 MIR570-201ENST00000384917 97 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 RNA5SP467-201ENST00000391274 118 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 AL161788.1-201ENST00000441805 169 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 HMGN2P32-201ENST00000444648 269 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 CYP2C59P-201ENST00000457790 269 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 SCARNA15-202ENST00000516881 127 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 SNORA48.11-201ENST00000517015 89 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 RNU7-128P-201ENST00000517247 62 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 AC008507.4-201ENST00000585464 127 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 AL137067.1-201ENST00000615933 120 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 MIR376A2-201ENST00000636782 80 ntBASIC2.27□□□□□ -2.05
FOXN1O15353 SNORD24-201ENST00000383884 75 ntBASIC2.26□□□□□ -2.05
FOXN1O15353 RNU2-48P-201ENST00000410694 191 ntBASIC2.26□□□□□ -2.05
FOXN1O15353 RNA5SP136-201ENST00000410906 107 ntBASIC2.26□□□□□ -2.05
FOXN1O15353 RNU7-99P-201ENST00000516271 62 ntBASIC2.26□□□□□ -2.05
FOXN1O15353 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.26□□□□□ -2.05
FOXN1O15353 RNU6-766P-201ENST00000362478 107 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 RNU6-640P-201ENST00000363693 105 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 SNORD73B-201ENST00000364394 72 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 Y_RNA.267-201ENST00000364679 109 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 Y_RNA.328-201ENST00000365208 113 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 RNA5SP37-201ENST00000365420 130 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 Y_RNA.354-201ENST00000365448 111 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 RNU6-756P-201ENST00000383997 107 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 RNU6-1072P-201ENST00000384703 107 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 RNU6-443P-201ENST00000384780 107 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.25□□□□□ -2.05
FOXN1O15353 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 AC079804.2-201ENST00000490376 200 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 AC011406.1-201ENST00000512440 370 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 RNU6-113P-201ENST00000516653 101 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 RNU1-40P-201ENST00000516816 164 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 RNU1-97P-201ENST00000516872 164 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 RNU6-250P-201ENST00000516958 103 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.25□□□□□ -2.05
FOXN1O15353 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.25□□□□□ -2.05
FOXN1O15353 AP001318.4-201ENST00000616637 121 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 U4atac.1-201ENST00000618345 95 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.25□□□□□ -2.05
FOXN1O15353 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
FOXN1O15353 snoU2-30.2-201ENST00000362805 70 ntBASIC2.24□□□□□ -2.05
FOXN1O15353 Y_RNA.163-201ENST00000363702 113 ntBASIC2.24□□□□□ -2.05
FOXN1O15353 U8.6-201ENST00000364939 135 ntBASIC2.24□□□□□ -2.05
FOXN1O15353 SNORA51.10-201ENST00000384418 136 ntBASIC2.24□□□□□ -2.05
FOXN1O15353 MIR518F-201ENST00000384973 87 ntBASIC2.24□□□□□ -2.05
FOXN1O15353 RNU2-63P-201ENST00000410792 194 ntBASIC2.24□□□□□ -2.05
FOXN1O15353 COX6CP6-201ENST00000490840 228 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms