Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RNU6-830P-201ENST00000516353 107 ntBASIC1.29□□□□□ -2.2
ATP2A1O14983 SNORD111.1-201ENST00000516421 86 ntBASIC1.29□□□□□ -2.2
ATP2A1O14983 SNORA74.3-201ENST00000517108 154 ntBASIC1.29□□□□□ -2.2
ATP2A1O14983 MIR4662B-201ENST00000579498 81 ntBASIC1.29□□□□□ -2.2
ATP2A1O14983 MIR4295-201ENST00000585286 85 ntBASIC1.29□□□□□ -2.2
ATP2A1O14983 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.29□□□□□ -2.2
ATP2A1O14983 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.29□□□□□ -2.2
ATP2A1O14983 AL365265.1-201ENST00000621045 234 ntBASIC1.29□□□□□ -2.2
ATP2A1O14983 Y_RNA.76-201ENST00000362931 109 ntBASIC1.28□□□□□ -2.2
ATP2A1O14983 SNORD58.1-201ENST00000391313 66 ntBASIC1.28□□□□□ -2.2
ATP2A1O14983 AC087343.1-201ENST00000477341 475 ntBASIC1.28□□□□□ -2.2
ATP2A1O14983 MTND1P19-201ENST00000511780 315 ntBASIC1.28□□□□□ -2.2
ATP2A1O14983 RNU6-126P-201ENST00000516685 103 ntBASIC1.28□□□□□ -2.2
ATP2A1O14983 AC090821.2-201ENST00000523552 176 ntBASIC1.28□□□□□ -2.2
ATP2A1O14983 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
ATP2A1O14983 AC004817.2-201ENST00000561794 651 ntBASIC1.28□□□□□ -2.2
ATP2A1O14983 RNU6-653P-201ENST00000363074 106 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 SNORD27-201ENST00000363981 72 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 Y_RNA.292-201ENST00000364904 97 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 RNU6-574P-201ENST00000384265 107 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 Y_RNA.572-201ENST00000384757 98 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 snosnR66.1-201ENST00000391095 99 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 Y_RNA.587-201ENST00000391210 103 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.27□□□□□ -2.21
ATP2A1O14983 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 SNORD123-201ENST00000459473 70 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 SNORD116-28-201ENST00000516123 91 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 RNU7-43P-201ENST00000516554 64 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 SNORA18.7-201ENST00000516910 131 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 AC011921.3-201ENST00000605540 361 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 Pinc.1-201ENST00000616452 154 ntBASIC1.27□□□□□ -2.21
ATP2A1O14983 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
ATP2A1O14983 Y_RNA.262-201ENST00000364641 102 ntBASIC1.26□□□□□ -2.21
ATP2A1O14983 RNU4-17P-201ENST00000365598 141 ntBASIC1.26□□□□□ -2.21
ATP2A1O14983 RNY3P5-201ENST00000384127 102 ntBASIC1.26□□□□□ -2.21
ATP2A1O14983 Y_RNA.477-201ENST00000384352 108 ntBASIC1.26□□□□□ -2.21
ATP2A1O14983 Y_RNA.539-201ENST00000384635 107 ntBASIC1.26□□□□□ -2.21
ATP2A1O14983 RNU6-1054P-201ENST00000411293 104 ntBASIC1.26□□□□□ -2.21
ATP2A1O14983 RNU6-1023P-201ENST00000516137 106 ntBASIC1.26□□□□□ -2.21
ATP2A1O14983 RN7SKP164-201ENST00000516138 266 ntBASIC1.26□□□□□ -2.21
ATP2A1O14983 MIR3128-201ENST00000581957 66 ntBASIC1.26□□□□□ -2.21
ATP2A1O14983 AL391903.3-201ENST00000612158 163 ntBASIC1.26□□□□□ -2.21
ATP2A1O14983 SNORD114-27-201ENST00000363766 70 ntBASIC1.25□□□□□ -2.21
ATP2A1O14983 MIR618-201ENST00000385287 98 ntBASIC1.25□□□□□ -2.21
ATP2A1O14983 MIR616-201ENST00000385293 97 ntBASIC1.25□□□□□ -2.21
ATP2A1O14983 RNU2-55P-201ENST00000411146 174 ntBASIC1.25□□□□□ -2.21
ATP2A1O14983 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.25□□□□□ -2.21
ATP2A1O14983 snoU13.18-201ENST00000459483 104 ntBASIC1.25□□□□□ -2.21
ATP2A1O14983 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.25□□□□□ -2.21
ATP2A1O14983 AL096861.1-201ENST00000610899 123 ntBASIC1.25□□□□□ -2.21
ATP2A1O14983 AC015726.2-201ENST00000620112 122 ntBASIC1.25□□□□□ -2.21
ATP2A1O14983 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
ATP2A1O14983 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
ATP2A1O14983 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ATP2A1O14983 snoU2_19.4-201ENST00000364329 80 ntBASIC1.24□□□□□ -2.21
ATP2A1O14983 SNORA25.8-201ENST00000364831 128 ntBASIC1.24□□□□□ -2.21
ATP2A1O14983 Y_RNA.307-201ENST00000365022 117 ntBASIC1.24□□□□□ -2.21
ATP2A1O14983 Y_RNA.447-201ENST00000384184 113 ntBASIC1.24□□□□□ -2.21
ATP2A1O14983 MIR520C-201ENST00000385005 87 ntBASIC1.24□□□□□ -2.21
ATP2A1O14983 RNU6-381P-201ENST00000391259 108 ntBASIC1.24□□□□□ -2.21
ATP2A1O14983 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.24□□□□□ -2.21
ATP2A1O14983 AC245047.7-201ENST00000440265 293 ntBASIC1.24□□□□□ -2.21
ATP2A1O14983 SNORA31.2-201ENST00000516019 134 ntBASIC1.24□□□□□ -2.21
ATP2A1O14983 MIR4764-201ENST00000580680 88 ntBASIC1.24□□□□□ -2.21
ATP2A1O14983 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.24□□□□□ -2.21
ATP2A1O14983 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
ATP2A1O14983 Y_RNA.60-201ENST00000362831 98 ntBASIC1.23□□□□□ -2.21
ATP2A1O14983 RNY4P28-201ENST00000365281 93 ntBASIC1.23□□□□□ -2.21
ATP2A1O14983 MIR520E-201ENST00000384867 87 ntBASIC1.23□□□□□ -2.21
ATP2A1O14983 MIR489-201ENST00000384923 84 ntBASIC1.23□□□□□ -2.21
ATP2A1O14983 MIR548O-201ENST00000408583 114 ntBASIC1.23□□□□□ -2.21
ATP2A1O14983 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.23□□□□□ -2.21
ATP2A1O14983 SNORA31.4-201ENST00000516049 129 ntBASIC1.23□□□□□ -2.21
ATP2A1O14983 RNU4-71P-201ENST00000516258 113 ntBASIC1.23□□□□□ -2.21
ATP2A1O14983 Y_RNA.680-201ENST00000516441 93 ntBASIC1.23□□□□□ -2.21
ATP2A1O14983 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
ATP2A1O14983 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
ATP2A1O14983 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 Y_RNA.65-201ENST00000362846 100 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 Y_RNA.118-201ENST00000363300 101 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 SNORA20.1-201ENST00000364790 130 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 Y_RNA.486-201ENST00000384398 107 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 RNU6-1228P-201ENST00000391014 107 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 SNORA26-201ENST00000391286 122 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 U8.17-201ENST00000391292 132 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 AC048334.1-201ENST00000477975 159 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 AL133373.1-201ENST00000497098 94 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 SCARNA8-201ENST00000515924 131 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 RNU4-57P-201ENST00000515980 135 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 RNU7-25P-201ENST00000516544 62 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 MIR3192-201ENST00000584920 77 ntBASIC1.22□□□□□ -2.21
ATP2A1O14983 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.22□□□□□ -2.21
ATP2A1O14983 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.22□□□□□ -2.21
ATP2A1O14983 RNU6-103P-201ENST00000363686 107 ntBASIC1.21□□□□□ -2.22
ATP2A1O14983 SNORD24-201ENST00000383884 75 ntBASIC1.21□□□□□ -2.22
ATP2A1O14983 RNU6-484P-201ENST00000384016 107 ntBASIC1.21□□□□□ -2.22
ATP2A1O14983 Y_RNA.547-201ENST00000384654 119 ntBASIC1.21□□□□□ -2.22
ATP2A1O14983 MT-TT-201ENST00000387460 66 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms