Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 SNORD115-21-201ENST00000362963 81 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-14-201ENST00000363090 81 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-13-201ENST00000363358 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-11-201ENST00000363616 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-5-201ENST00000363633 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-39-201ENST00000363694 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-4-201ENST00000363810 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-16-201ENST00000363887 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-6-201ENST00000363942 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-15-201ENST00000364809 81 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-1-201ENST00000364961 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-26-201ENST00000365067 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-10-201ENST00000365073 81 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-43-201ENST00000365503 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-36-201ENST00000365629 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 GPR143P-201ENST00000434155 205 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 Z82188.1-201ENST00000436709 154 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 snoU83B.1-201ENST00000517136 88 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 AC104576.1-201ENST00000524225 88 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 ELOCP32-201ENST00000548625 324 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 SNORD115-40-201ENST00000606510 82 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 AL512506.1-201ENST00000613918 449 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 AL158063.1-201ENST00000615349 536 ntBASIC-1.84□□□□□ -2.7
CHD1O14646 RNU6-501P-201ENST00000364072 100 ntBASIC-1.85□□□□□ -2.71
CHD1O14646 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.85□□□□□ -2.71
CHD1O14646 SNORA72-201ENST00000384339 132 ntBASIC-1.85□□□□□ -2.71
CHD1O14646 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.85□□□□□ -2.71
CHD1O14646 AL445584.3-201ENST00000617173 78 ntBASIC-1.85□□□□□ -2.71
CHD1O14646 AL354950.2-201ENST00000617939 290 ntBASIC-1.85□□□□□ -2.71
CHD1O14646 MIR20A-201ENST00000362279 71 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 SNORA69-201ENST00000383895 132 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 RNU6-949P-201ENST00000384040 107 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 RNU6-767P-201ENST00000384132 107 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 RNU2-29P-201ENST00000410423 189 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 RNA5SP484-201ENST00000458857 111 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 AL158050.2-201ENST00000605336 568 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 AC132825.6-201ENST00000638861 357 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 SNORA63.5-201ENST00000363548 123 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.86□□□□□ -2.71
CHD1O14646 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.86□□□□□ -2.71
CHD1O14646 RNU7-74P-201ENST00000459104 62 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 AP001282.2-201ENST00000616149 309 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 AL121895.2-201ENST00000619558 447 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 AC099654.12-201ENST00000639868 649 ntBASIC-1.86□□□□□ -2.71
CHD1O14646 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.87□□□□□ -2.71
CHD1O14646 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.87□□□□□ -2.71
CHD1O14646 RNU6-533P-201ENST00000384144 107 ntBASIC-1.87□□□□□ -2.71
CHD1O14646 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.87□□□□□ -2.71
CHD1O14646 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.87□□□□□ -2.71
CHD1O14646 RNU6-913P-201ENST00000390913 95 ntBASIC-1.87□□□□□ -2.71
CHD1O14646 MIR8485-201ENST00000401372 91 ntBASIC-1.87□□□□□ -2.71
CHD1O14646 RNU6-325P-201ENST00000411132 105 ntBASIC-1.87□□□□□ -2.71
CHD1O14646 Z84480.1-201ENST00000605131 311 ntBASIC-1.87□□□□□ -2.71
CHD1O14646 Y_RNA.421-201ENST00000384052 101 ntBASIC-1.88□□□□□ -2.71
CHD1O14646 RNU7-104P-201ENST00000459398 79 ntBASIC-1.88□□□□□ -2.71
CHD1O14646 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.88□□□□□ -2.71
CHD1O14646 AC096949.1-201ENST00000412047 152 ntBASIC-1.88□□□□□ -2.71
CHD1O14646 SNORA25.16-201ENST00000516741 121 ntBASIC-1.88□□□□□ -2.71
CHD1O14646 MIR5188-201ENST00000583467 113 ntBASIC-1.88□□□□□ -2.71
CHD1O14646 AC011373.1-201ENST00000607270 237 ntBASIC-1.88□□□□□ -2.71
CHD1O14646 TUSC7.1-201ENST00000610969 165 ntBASIC-1.88□□□□□ -2.71
CHD1O14646 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.88□□□□□ -2.71
CHD1O14646 RNU6-489P-201ENST00000618289 107 ntBASIC-1.88□□□□□ -2.71
CHD1O14646 RNU6-214P-201ENST00000384130 107 ntBASIC-1.89□□□□□ -2.71
CHD1O14646 RNU6-74P-201ENST00000384235 107 ntBASIC-1.89□□□□□ -2.71
CHD1O14646 MIR147A-201ENST00000385079 72 ntBASIC-1.89□□□□□ -2.71
CHD1O14646 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-1.89□□□□□ -2.71
CHD1O14646 AL031667.1-201ENST00000440222 725 ntBASIC-1.89□□□□□ -2.71
CHD1O14646 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.9□□□□□ -2.71
CHD1O14646 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.9□□□□□ -2.71
CHD1O14646 RNU7-175P-201ENST00000515915 61 ntBASIC-1.9□□□□□ -2.71
CHD1O14646 MIR124-2-201ENST00000385081 109 ntBASIC-1.91□□□□□ -2.71
CHD1O14646 RNU6-903P-201ENST00000391270 109 ntBASIC-1.91□□□□□ -2.71
CHD1O14646 MTND3P8-201ENST00000412909 339 ntBASIC-1.91□□□□□ -2.71
CHD1O14646 MIR4473-201ENST00000583731 91 ntBASIC-1.91□□□□□ -2.71
CHD1O14646 AL133215.3-201ENST00000609801 448 ntBASIC-1.91□□□□□ -2.71
CHD1O14646 MIR539-201ENST00000365690 78 ntBASIC-1.91□□□□□ -2.72
CHD1O14646 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.91□□□□□ -2.72
CHD1O14646 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.91□□□□□ -2.72
CHD1O14646 AC069503.3-201ENST00000618674 145 ntBASIC-1.91□□□□□ -2.72
CHD1O14646 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.91□□□□□ -2.72
CHD1O14646 SNORD50.1-201ENST00000362987 71 ntBASIC-1.92□□□□□ -2.72
CHD1O14646 SNORA27-201ENST00000384323 126 ntBASIC-1.92□□□□□ -2.72
CHD1O14646 RNU4-55P-201ENST00000410731 137 ntBASIC-1.92□□□□□ -2.72
CHD1O14646 RNU7-53P-201ENST00000516705 60 ntBASIC-1.92□□□□□ -2.72
CHD1O14646 AL137161.1-201ENST00000532231 390 ntBASIC-1.92□□□□□ -2.72
CHD1O14646 MIR2681-201ENST00000581814 105 ntBASIC-1.92□□□□□ -2.72
CHD1O14646 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.93□□□□□ -2.72
CHD1O14646 SNORD24-201ENST00000383884 75 ntBASIC-1.93□□□□□ -2.72
CHD1O14646 AC022028.1-201ENST00000412054 408 ntBASIC-1.93□□□□□ -2.72
CHD1O14646 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.93□□□□□ -2.72
CHD1O14646 POLR3GP2-201ENST00000588366 668 ntBASIC-1.93□□□□□ -2.72
CHD1O14646 MIR6854-201ENST00000614935 69 ntBASIC-1.93□□□□□ -2.72
CHD1O14646 SNORD77.3-201ENST00000391113 65 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.94□□□□□ -2.72
CHD1O14646 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.94□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms