Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 Y_RNA.24-201ENST00000362508 103 ntBASIC0.89□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.117-201ENST00000363294 101 ntBASIC0.89□□□□□ -2.27
NPIPA3F8WFD2 RNU4-38P-201ENST00000364472 129 ntBASIC0.89□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.376-201ENST00000365638 108 ntBASIC0.89□□□□□ -2.27
NPIPA3F8WFD2 MIR200A-201ENST00000384875 90 ntBASIC0.89□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.587-201ENST00000391210 103 ntBASIC0.89□□□□□ -2.27
NPIPA3F8WFD2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.89□□□□□ -2.27
NPIPA3F8WFD2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.89□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.666-201ENST00000516187 112 ntBASIC0.89□□□□□ -2.27
NPIPA3F8WFD2 RNU7-25P-201ENST00000516544 62 ntBASIC0.89□□□□□ -2.27
NPIPA3F8WFD2 AL020996.3-201ENST00000606617 222 ntBASIC0.89□□□□□ -2.27
NPIPA3F8WFD2 MIR6788-201ENST00000618842 66 ntBASIC0.89□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.237-201ENST00000364439 102 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 SNORA1.2-201ENST00000365189 134 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 SNORA51.10-201ENST00000384418 136 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.547-201ENST00000384654 119 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 MIR548O-201ENST00000408583 114 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 MIR548J-201ENST00000408833 112 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 RNU4-57P-201ENST00000515980 135 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 MIR4661-201ENST00000582720 75 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 AC131055.1-201ENST00000584626 316 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 AC012433.1-201ENST00000588916 398 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 AC006504.6-201ENST00000590142 199 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 AP001282.2-201ENST00000616149 309 ntBASIC0.88□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.44-201ENST00000362676 108 ntBASIC0.87□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.275-201ENST00000364726 110 ntBASIC0.87□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.572-201ENST00000384757 98 ntBASIC0.87□□□□□ -2.27
NPIPA3F8WFD2 MIR526A2-201ENST00000390198 65 ntBASIC0.87□□□□□ -2.27
NPIPA3F8WFD2 MIR1302-7-201ENST00000408841 72 ntBASIC0.87□□□□□ -2.27
NPIPA3F8WFD2 POLR2J4-204ENST00000418424 324 ntBASIC0.87□□□□□ -2.27
NPIPA3F8WFD2 MTCO2P24-201ENST00000515611 426 ntBASIC0.87□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.720-201ENST00000517166 92 ntBASIC0.87□□□□□ -2.27
NPIPA3F8WFD2 AC109810.1-201ENST00000534066 224 ntBASIC0.87□□□□□ -2.27
NPIPA3F8WFD2 MIR151B-201ENST00000584249 96 ntBASIC0.87□□□□□ -2.27
NPIPA3F8WFD2 MIR4791-201ENST00000607666 84 ntBASIC0.87□□□□□ -2.27
NPIPA3F8WFD2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.87□□□□□ -2.27
NPIPA3F8WFD2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 RNU6-740P-201ENST00000364734 105 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.326-201ENST00000365176 113 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 RNU6-1138P-201ENST00000365359 106 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.486-201ENST00000384398 107 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 SNORA8.3-201ENST00000384679 139 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 SCARNA8-201ENST00000515924 131 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 SNORD77.4-201ENST00000516158 81 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 RNU11-2P-201ENST00000516898 142 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 AC103810.9-201ENST00000606688 112 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 MIR6516-201ENST00000630554 81 ntBASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
NPIPA3F8WFD2 SNORA63-201ENST00000363450 132 ntBASIC0.85□□□□□ -2.27
NPIPA3F8WFD2 RNU6-654P-201ENST00000364373 107 ntBASIC0.85□□□□□ -2.27
NPIPA3F8WFD2 RNU6-1160P-201ENST00000384546 104 ntBASIC0.85□□□□□ -2.27
NPIPA3F8WFD2 Y_RNA.537-201ENST00000384626 109 ntBASIC0.85□□□□□ -2.27
NPIPA3F8WFD2 RNU6-847P-201ENST00000411115 108 ntBASIC0.85□□□□□ -2.27
NPIPA3F8WFD2 AL392103.1-201ENST00000447000 198 ntBASIC0.85□□□□□ -2.27
NPIPA3F8WFD2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.85□□□□□ -2.27
NPIPA3F8WFD2 AC243994.1-201ENST00000618627 109 ntBASIC0.85□□□□□ -2.27
NPIPA3F8WFD2 MTND1P7-201ENST00000632801 297 ntBASIC0.85□□□□□ -2.27
NPIPA3F8WFD2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
NPIPA3F8WFD2 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 RNU1-36P-201ENST00000365130 165 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 MIR606-201ENST00000384851 96 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 MIR532-201ENST00000385025 91 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 MIR1302-6-201ENST00000408466 90 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 RNA5SP95-201ENST00000410319 137 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 RNU6-651P-201ENST00000411040 105 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 FABP5P4-201ENST00000437203 171 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 AC107297.1-201ENST00000459991 176 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 AC036111.3-201ENST00000526389 112 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 MIR3973-201ENST00000579824 107 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 MIR548AO-201ENST00000579992 96 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 RNU6-94P-201ENST00000607728 107 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 AC022709.1-201ENST00000615967 87 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 MIR6515-201ENST00000619843 57 ntBASIC0.84□□□□□ -2.27
NPIPA3F8WFD2 RNY1-201ENST00000364228 113 ntBASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.229-201ENST00000364347 113 ntBASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 MIR626-201ENST00000385032 94 ntBASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 MT-TW-201ENST00000387382 68 ntBASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 RPS3AP1-201ENST00000413190 320 ntBASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 RNU6-693P-201ENST00000516134 107 ntBASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 MIR4662B-201ENST00000579498 81 ntBASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 MIR5688-201ENST00000580619 83 ntBASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 AC008737.2-201ENST00000599446 118 ntBASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 MIR8062-201ENST00000621515 85 ntBASIC0.83□□□□□ -2.28
NPIPA3F8WFD2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.241-201ENST00000364470 117 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 RNU6-396P-201ENST00000365369 105 ntBASIC0.82□□□□□ -2.28
NPIPA3F8WFD2 Y_RNA.461-201ENST00000384263 103 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms