Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 RNU6-296P-201ENST00000384608 107 ntBASIC1.39□□□□□ -2.19
SMCHD1A6NHR9 Y_RNA.552-201ENST00000384665 112 ntBASIC1.39□□□□□ -2.19
SMCHD1A6NHR9 SNORA48.1-201ENST00000390879 135 ntBASIC1.39□□□□□ -2.19
SMCHD1A6NHR9 SNORA40.6-201ENST00000391153 128 ntBASIC1.39□□□□□ -2.19
SMCHD1A6NHR9 MIR1285-1-201ENST00000408593 84 ntBASIC1.39□□□□□ -2.19
SMCHD1A6NHR9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.39□□□□□ -2.19
SMCHD1A6NHR9 RNU7-12P-201ENST00000516030 62 ntBASIC1.39□□□□□ -2.19
SMCHD1A6NHR9 SNORA18.4-201ENST00000516440 124 ntBASIC1.39□□□□□ -2.19
SMCHD1A6NHR9 RNA5SP481-201ENST00000516814 122 ntBASIC1.39□□□□□ -2.19
SMCHD1A6NHR9 FAM106DP-201ENST00000586416 501 ntBASIC1.39□□□□□ -2.19
SMCHD1A6NHR9 AC004792.1-201ENST00000614523 137 ntBASIC1.39□□□□□ -2.19
SMCHD1A6NHR9 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.39□□□□□ -2.19
SMCHD1A6NHR9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SMCHD1A6NHR9 MIR548I3-201ENST00000408378 149 ntBASIC1.38□□□□□ -2.19
SMCHD1A6NHR9 MIR548I1-201ENST00000408810 149 ntBASIC1.38□□□□□ -2.19
SMCHD1A6NHR9 HSPE1P9-201ENST00000440046 311 ntBASIC1.38□□□□□ -2.19
SMCHD1A6NHR9 NDUFA4P2-201ENST00000489989 244 ntBASIC1.38□□□□□ -2.19
SMCHD1A6NHR9 RNU6-365P-201ENST00000517113 106 ntBASIC1.38□□□□□ -2.19
SMCHD1A6NHR9 MIR4299-201ENST00000577899 72 ntBASIC1.38□□□□□ -2.19
SMCHD1A6NHR9 MIR3937-201ENST00000580135 106 ntBASIC1.38□□□□□ -2.19
SMCHD1A6NHR9 Y_RNA.170-201ENST00000363746 110 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 RNU6-47P-201ENST00000383866 107 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 Y_RNA.435-201ENST00000384095 112 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 SNORD26-201ENST00000384147 75 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 MIR526A1-201ENST00000384897 85 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 AC090049.2-201ENST00000550377 109 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 AL357312.1-201ENST00000603879 298 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 SNORD50B-201ENST00000364995 70 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 RNU6-1138P-201ENST00000365359 106 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 MIR15B-201ENST00000385045 98 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 RNA5SP109-201ENST00000391010 116 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 Y_RNA.793-201ENST00000411222 111 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 MIR6078-201ENST00000611069 100 ntBASIC1.37□□□□□ -2.19
SMCHD1A6NHR9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 Y_RNA.293-201ENST00000364908 93 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 SNORA24-201ENST00000384096 131 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 MIR613-201ENST00000385248 95 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 MIR653-201ENST00000385279 96 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 RNU6-381P-201ENST00000391259 108 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 AL161935.2-201ENST00000414627 60 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 AC233266.1-201ENST00000454518 96 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 AC008834.1-201ENST00000511612 175 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 RNU6-138P-201ENST00000515952 107 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 MIR4308-201ENST00000580634 81 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 MIR4764-201ENST00000580680 88 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 DEFB117-201ENST00000602356 141 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 AC242852.1-201ENST00000612151 96 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 AC244015.1-201ENST00000622301 99 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 AC091895.1-201ENST00000624494 256 ntBASIC1.36□□□□□ -2.19
SMCHD1A6NHR9 Y_RNA.432-201ENST00000384087 111 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 RNU6-163P-201ENST00000384396 106 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 MIR136-201ENST00000385207 82 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 RNU2-56P-201ENST00000516826 190 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 MIR4662B-201ENST00000579498 81 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 DNAJC19P2-201ENST00000593340 302 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 AC097639.2-201ENST00000603159 172 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 SNORD114-26-201ENST00000363543 72 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 RNU4-84P-201ENST00000364200 139 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 MIR513A1-201ENST00000385138 129 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 RNU6-578P-201ENST00000390980 103 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 SNORA26-201ENST00000391286 122 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 AC093850.1-201ENST00000454121 251 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 SNORD77.4-201ENST00000516158 81 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 RNU6-165P-201ENST00000517170 99 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 AC090142.3-201ENST00000519012 385 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 MIR151B-201ENST00000584249 96 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 AC008507.4-201ENST00000585464 127 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 AC078938.1-201ENST00000620993 318 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 U6.106-201ENST00000636360 105 ntBASIC1.35□□□□□ -2.19
SMCHD1A6NHR9 AP000648.3-201ENST00000623539 4507 ntBASIC1.34□□□□□ -2.19
SMCHD1A6NHR9 Y_RNA.537-201ENST00000384626 109 ntBASIC1.34□□□□□ -2.19
SMCHD1A6NHR9 SNORD72-201ENST00000390994 80 ntBASIC1.34□□□□□ -2.19
SMCHD1A6NHR9 MIR1185-1-201ENST00000408598 86 ntBASIC1.34□□□□□ -2.19
SMCHD1A6NHR9 RNU6-602P-201ENST00000411155 105 ntBASIC1.34□□□□□ -2.19
SMCHD1A6NHR9 AC022559.1-201ENST00000520905 205 ntBASIC1.34□□□□□ -2.19
SMCHD1A6NHR9 AL513534.2-201ENST00000603836 250 ntBASIC1.34□□□□□ -2.19
SMCHD1A6NHR9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
SMCHD1A6NHR9 MIR126-201ENST00000362291 85 ntBASIC1.33□□□□□ -2.2
SMCHD1A6NHR9 Y_RNA.336-201ENST00000365307 109 ntBASIC1.33□□□□□ -2.2
SMCHD1A6NHR9 AL451046.2-201ENST00000403074 277 ntBASIC1.33□□□□□ -2.2
SMCHD1A6NHR9 AL121890.5-201ENST00000620848 304 ntBASIC1.33□□□□□ -2.2
SMCHD1A6NHR9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
SMCHD1A6NHR9 Y_RNA.24-201ENST00000362508 103 ntBASIC1.33□□□□□ -2.2
SMCHD1A6NHR9 Y_RNA.121-201ENST00000363309 113 ntBASIC1.33□□□□□ -2.2
SMCHD1A6NHR9 RNU6-187P-201ENST00000384139 106 ntBASIC1.33□□□□□ -2.2
SMCHD1A6NHR9 RNU6-1289P-201ENST00000384431 106 ntBASIC1.33□□□□□ -2.2
SMCHD1A6NHR9 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.33□□□□□ -2.2
SMCHD1A6NHR9 AC112693.2-201ENST00000556538 232 ntBASIC1.33□□□□□ -2.2
SMCHD1A6NHR9 MIR3646-201ENST00000578301 84 ntBASIC1.33□□□□□ -2.2
SMCHD1A6NHR9 MIR6779-201ENST00000617283 64 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms