Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 Y_RNA.316-201ENST00000365118 111 ntBASIC3.37□□□□□ -1.87
RCCD1A6NED2 Y_RNA.354-201ENST00000365448 111 ntBASIC3.37□□□□□ -1.87
RCCD1A6NED2 snoU13.16-201ENST00000459350 104 ntBASIC3.37□□□□□ -1.87
RCCD1A6NED2 RN7SL330P-201ENST00000469709 307 ntBASIC3.37□□□□□ -1.87
RCCD1A6NED2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.37□□□□□ -1.87
RCCD1A6NED2 RNU6-1244P-201ENST00000363614 108 ntBASIC3.36□□□□□ -1.87
RCCD1A6NED2 RNU6-865P-201ENST00000364772 107 ntBASIC3.36□□□□□ -1.87
RCCD1A6NED2 RNU6-342P-201ENST00000384521 104 ntBASIC3.36□□□□□ -1.87
RCCD1A6NED2 Y_RNA.567-201ENST00000384736 106 ntBASIC3.36□□□□□ -1.87
RCCD1A6NED2 MIR34C-201ENST00000384831 77 ntBASIC3.36□□□□□ -1.87
RCCD1A6NED2 MIR5195-201ENST00000583555 115 ntBASIC3.36□□□□□ -1.87
RCCD1A6NED2 AC022202.1-201ENST00000613515 211 ntBASIC3.36□□□□□ -1.87
RCCD1A6NED2 SEPT14P17-201ENST00000617978 177 ntBASIC3.36□□□□□ -1.87
RCCD1A6NED2 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RCCD1A6NED2 RNA5SP72-201ENST00000364442 117 ntBASIC3.35□□□□□ -1.87
RCCD1A6NED2 RNU6-1307P-201ENST00000391012 103 ntBASIC3.35□□□□□ -1.87
RCCD1A6NED2 RNU11-3P-201ENST00000391111 133 ntBASIC3.35□□□□□ -1.87
RCCD1A6NED2 MIR548G-201ENST00000408442 89 ntBASIC3.35□□□□□ -1.87
RCCD1A6NED2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.35□□□□□ -1.87
RCCD1A6NED2 HMGN1P33-201ENST00000432945 451 ntBASIC3.35□□□□□ -1.87
RCCD1A6NED2 AL161932.1-201ENST00000437408 146 ntBASIC3.35□□□□□ -1.87
RCCD1A6NED2 RN7SL293P-201ENST00000481765 281 ntBASIC3.35□□□□□ -1.87
RCCD1A6NED2 MIR3126-201ENST00000577443 74 ntBASIC3.35□□□□□ -1.87
RCCD1A6NED2 RNU6-90P-201ENST00000606352 106 ntBASIC3.35□□□□□ -1.87
RCCD1A6NED2 MIR8055-201ENST00000610739 97 ntBASIC3.35□□□□□ -1.87
RCCD1A6NED2 AL513423.1-201ENST00000621695 132 ntBASIC3.35□□□□□ -1.87
RCCD1A6NED2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RCCD1A6NED2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RCCD1A6NED2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC3.34□□□□□ -1.87
RCCD1A6NED2 RNA5SP50-201ENST00000363731 107 ntBASIC3.34□□□□□ -1.87
RCCD1A6NED2 MIR183-201ENST00000384958 110 ntBASIC3.34□□□□□ -1.87
RCCD1A6NED2 RN7SL20P-201ENST00000488827 297 ntBASIC3.34□□□□□ -1.87
RCCD1A6NED2 SCARNA16.3-201ENST00000516595 184 ntBASIC3.34□□□□□ -1.87
RCCD1A6NED2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.34□□□□□ -1.87
RCCD1A6NED2 U6.105-201ENST00000637379 88 ntBASIC3.34□□□□□ -1.87
RCCD1A6NED2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
RCCD1A6NED2 SNORA70.4-201ENST00000365509 134 ntBASIC3.33□□□□□ -1.88
RCCD1A6NED2 MIR520A-201ENST00000384862 85 ntBASIC3.33□□□□□ -1.88
RCCD1A6NED2 MIR526A1-201ENST00000384897 85 ntBASIC3.33□□□□□ -1.88
RCCD1A6NED2 MIR627-201ENST00000384979 97 ntBASIC3.33□□□□□ -1.88
RCCD1A6NED2 MIR34B-201ENST00000385076 84 ntBASIC3.33□□□□□ -1.88
RCCD1A6NED2 RNU2-7P-201ENST00000410794 178 ntBASIC3.33□□□□□ -1.88
RCCD1A6NED2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.33□□□□□ -1.88
RCCD1A6NED2 AC139453.2-201ENST00000487255 133 ntBASIC3.33□□□□□ -1.88
RCCD1A6NED2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.33□□□□□ -1.88
RCCD1A6NED2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.33□□□□□ -1.88
RCCD1A6NED2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC3.33□□□□□ -1.88
RCCD1A6NED2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RCCD1A6NED2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
RCCD1A6NED2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RCCD1A6NED2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
RCCD1A6NED2 Y_RNA.94-201ENST00000363068 106 ntBASIC3.32□□□□□ -1.88
RCCD1A6NED2 RNU1-91P-201ENST00000364746 163 ntBASIC3.32□□□□□ -1.88
RCCD1A6NED2 Y_RNA.448-201ENST00000384185 108 ntBASIC3.32□□□□□ -1.88
RCCD1A6NED2 SNORD38.2-201ENST00000384470 69 ntBASIC3.32□□□□□ -1.88
RCCD1A6NED2 MIR597-201ENST00000384968 97 ntBASIC3.32□□□□□ -1.88
RCCD1A6NED2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.32□□□□□ -1.88
RCCD1A6NED2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.32□□□□□ -1.88
RCCD1A6NED2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.32□□□□□ -1.88
RCCD1A6NED2 RPL12P50-201ENST00000603116 116 ntBASIC3.32□□□□□ -1.88
RCCD1A6NED2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.32□□□□□ -1.88
RCCD1A6NED2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RCCD1A6NED2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RCCD1A6NED2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RCCD1A6NED2 AP006437.1-201ENST00000641440 3685 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RCCD1A6NED2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
RCCD1A6NED2 MIR208A-201ENST00000362287 71 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 MIR660-201ENST00000385235 97 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 RNU6-447P-201ENST00000410293 104 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 RNU6-1118P-201ENST00000410382 104 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 RNU6-1076P-201ENST00000410397 104 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 RNU6-355P-201ENST00000410427 104 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 RNU6-791P-201ENST00000410467 104 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 RNU6-705P-201ENST00000410601 104 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 RNU6-1100P-201ENST00000410691 104 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 RNU6-860P-201ENST00000410860 104 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 RNU6-1086P-201ENST00000410930 100 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 RNU6-1217P-201ENST00000411276 104 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 RNU6-785P-201ENST00000411324 104 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 AC104389.3-201ENST00000445629 235 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 SNORD67.1-201ENST00000516618 108 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.31□□□□□ -1.88
RCCD1A6NED2 U6.90-201ENST00000614007 104 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 MIR7975-201ENST00000619350 68 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 U6.70-201ENST00000620287 104 ntBASIC3.31□□□□□ -1.88
RCCD1A6NED2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.31□□□□□ -1.88
RCCD1A6NED2 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RCCD1A6NED2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RCCD1A6NED2 AC073325.2-201ENST00000339545 159 ntBASIC3.3□□□□□ -1.88
RCCD1A6NED2 SNORD114-10-201ENST00000363409 72 ntBASIC3.3□□□□□ -1.88
RCCD1A6NED2 RNU6-457P-201ENST00000363999 107 ntBASIC3.3□□□□□ -1.88
RCCD1A6NED2 RPL23AP6-201ENST00000446637 472 ntBASIC3.3□□□□□ -1.88
RCCD1A6NED2 SPINT5P-201ENST00000448174 155 ntBASIC3.3□□□□□ -1.88
RCCD1A6NED2 RNU1-98P-201ENST00000458992 160 ntBASIC3.3□□□□□ -1.88
RCCD1A6NED2 AP004217.1-201ENST00000480579 346 ntBASIC3.3□□□□□ -1.88
RCCD1A6NED2 RNU7-79P-201ENST00000516082 62 ntBASIC3.3□□□□□ -1.88
RCCD1A6NED2 MIR4709-201ENST00000577272 72 ntBASIC3.3□□□□□ -1.88
RCCD1A6NED2 AC021506.2-201ENST00000612354 169 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms