Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 IGKV1-22-201ENST00000524313 326 ntBASIC-1.17□□□□□ -2.6
TCRBV3S1A0A5B6 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.17□□□□□ -2.6
TCRBV3S1A0A5B6 MIR3913-1-201ENST00000577744 102 ntBASIC-1.17□□□□□ -2.6
TCRBV3S1A0A5B6 MIR4280-201ENST00000582178 76 ntBASIC-1.17□□□□□ -2.6
TCRBV3S1A0A5B6 AL356055.1-201ENST00000602528 446 ntBASIC-1.17□□□□□ -2.6
TCRBV3S1A0A5B6 AC124303.1-201ENST00000605703 360 ntBASIC-1.17□□□□□ -2.6
TCRBV3S1A0A5B6 AC011373.1-201ENST00000607270 237 ntBASIC-1.17□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-961P-201ENST00000363893 105 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 Y_RNA.242-201ENST00000364473 110 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-522P-201ENST00000364497 107 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-596P-201ENST00000365395 98 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 MIR204-201ENST00000385200 110 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 SNORD77.3-201ENST00000391113 65 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 RNU4-55P-201ENST00000410731 137 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 AC083904.1-201ENST00000487828 231 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-408P-201ENST00000515910 100 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 AC127455.1-201ENST00000565496 145 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 MIR4423-201ENST00000580922 80 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 AC245884.10-201ENST00000597355 337 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 AC073648.5-201ENST00000603502 305 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 MIR6717-201ENST00000622747 73 ntBASIC-1.18□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-874P-201ENST00000362390 105 ntBASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 SNORD95.1-201ENST00000364099 68 ntBASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-949P-201ENST00000384040 107 ntBASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-531P-201ENST00000516694 104 ntBASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-175P-201ENST00000516896 107 ntBASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 MIR5701-3-201ENST00000578890 82 ntBASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 MIR4273-201ENST00000582824 84 ntBASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 MIR5701-1-201ENST00000585138 82 ntBASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 AL158050.2-201ENST00000605336 568 ntBASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 MIR5701-2-201ENST00000615634 82 ntBASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.19□□□□□ -2.6
TCRBV3S1A0A5B6 SNORD115-28-201ENST00000363931 81 ntBASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 SNORD56B-201ENST00000384713 71 ntBASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 MIR514A2-201ENST00000385131 88 ntBASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 MIR514A3-201ENST00000385132 88 ntBASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 SNORD37.1-201ENST00000390968 65 ntBASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 MTCO2P19-201ENST00000427513 598 ntBASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 AL445193.1-201ENST00000441183 141 ntBASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 MIR2681-201ENST00000581814 105 ntBASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 AC018462.2-201ENST00000605375 395 ntBASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 AC022960.3-201ENST00000619794 441 ntBASIC-1.2□□□□□ -2.6
TCRBV3S1A0A5B6 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-653P-201ENST00000363074 106 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-509P-201ENST00000363519 107 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 RNU4-36P-201ENST00000364294 144 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 MIR181B2-201ENST00000385004 89 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 SNORD83B-201ENST00000386745 93 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 SNORD12B-201ENST00000410433 91 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 UBE2V1P7-201ENST00000446395 340 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 MTND3P16-201ENST00000452205 344 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 RNU7-115P-201ENST00000516433 55 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-1007P-201ENST00000516586 107 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 AC007494.3-201ENST00000624660 743 ntBASIC-1.21□□□□□ -2.6
TCRBV3S1A0A5B6 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.22□□□□□ -2.6
TCRBV3S1A0A5B6 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.22□□□□□ -2.6
TCRBV3S1A0A5B6 MIR1265-201ENST00000408444 86 ntBASIC-1.22□□□□□ -2.6
TCRBV3S1A0A5B6 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.22□□□□□ -2.6
TCRBV3S1A0A5B6 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-1.22□□□□□ -2.6
TCRBV3S1A0A5B6 RNU6-261P-201ENST00000459506 102 ntBASIC-1.22□□□□□ -2.6
TCRBV3S1A0A5B6 SNORD36C-201ENST00000516733 66 ntBASIC-1.22□□□□□ -2.6
TCRBV3S1A0A5B6 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.22□□□□□ -2.6
TCRBV3S1A0A5B6 AC018645.2-201ENST00000609151 472 ntBASIC-1.22□□□□□ -2.6
TCRBV3S1A0A5B6 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 AF228730.4-201ENST00000421457 183 ntBASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 FCF1P4-201ENST00000448326 183 ntBASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 RNU7-87P-201ENST00000459343 62 ntBASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 RNU7-45P-201ENST00000459460 63 ntBASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 RNU7-96P-201ENST00000459535 64 ntBASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-998P-201ENST00000515894 101 ntBASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 SCARNA17-201ENST00000516183 144 ntBASIC-1.23□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.24□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.24□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-306P-201ENST00000384617 107 ntBASIC-1.24□□□□□ -2.61
TCRBV3S1A0A5B6 MTATP6P23-201ENST00000440153 476 ntBASIC-1.24□□□□□ -2.61
TCRBV3S1A0A5B6 SNORD38.3-201ENST00000516599 73 ntBASIC-1.24□□□□□ -2.61
TCRBV3S1A0A5B6 RNU6-86P-201ENST00000606534 107 ntBASIC-1.24□□□□□ -2.61
TCRBV3S1A0A5B6 MIR6851-201ENST00000617060 67 ntBASIC-1.24□□□□□ -2.61
TCRBV3S1A0A5B6 AC022140.2-201ENST00000623500 188 ntBASIC-1.24□□□□□ -2.61
TCRBV3S1A0A5B6 RNU4-58P-201ENST00000363192 141 ntBASIC-1.25□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.25□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.25□□□□□ -2.61
TCRBV3S1A0A5B6 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms