Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MIR1289-2-201ENST00000408360 111 ntBASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNA5SP127-201ENST00000411051 133 ntBASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNORD36C-201ENST00000516733 66 ntBASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR514B-201ENST00000516774 80 ntBASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 Y_RNA.703-201ENST00000516846 111 ntBASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC019176.1-201ENST00000518519 225 ntBASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.44□□□□□ -2.18
IGHV4-28A0A0C4DH34 AL442644.1-201ENST00000454390 3105 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU6-746P-201ENST00000384112 109 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR513C-201ENST00000401352 84 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 AL603908.1-201ENST00000406098 201 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU6-938P-201ENST00000411285 103 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 AL021397.1-201ENST00000451806 248 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNORD123-201ENST00000459473 70 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU6-322P-201ENST00000516010 103 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNORA25.12-201ENST00000516202 82 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU6-922P-201ENST00000516753 99 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 AP003484.1-201ENST00000530974 250 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC090049.2-201ENST00000550377 109 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC002984.1-201ENST00000591692 448 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR376A2-201ENST00000636782 80 ntBASIC1.43□□□□□ -2.18
IGHV4-28A0A0C4DH34 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR302D-201ENST00000362275 68 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 Y_RNA.241-201ENST00000364470 117 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNA5SP160-201ENST00000364866 120 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU6-1292P-201ENST00000383856 107 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU6-1189P-201ENST00000383958 107 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU6-187P-201ENST00000384139 106 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 Y_RNA.488-201ENST00000384403 102 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR504-201ENST00000385065 83 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR624-201ENST00000385217 97 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR653-201ENST00000385279 96 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 AL451046.2-201ENST00000403074 277 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNA5SP489-201ENST00000410986 109 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 AL445685.2-201ENST00000422551 342 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 AC087499.4-201ENST00000448505 178 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNU6-717P-201ENST00000459076 104 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR3198-2-201ENST00000577868 80 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR548X2-201ENST00000579776 100 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR7843-201ENST00000622274 79 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 AP000553.5-201ENST00000641933 54 ntBASIC1.42□□□□□ -2.18
IGHV4-28A0A0C4DH34 WWP1P1-201ENST00000466609 2769 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNORD1A-201ENST00000364968 72 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 Y_RNA.410-201ENST00000383992 113 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 Y_RNA.497-201ENST00000384447 98 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR583-201ENST00000384846 75 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR569-201ENST00000385228 96 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNORD41-201ENST00000386967 70 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNORD28B-201ENST00000390993 75 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNA5SP272-201ENST00000516095 111 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 RNA5SP364-201ENST00000516938 78 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNORA74.3-201ENST00000517108 154 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR5089-201ENST00000580047 84 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 MIR5197-201ENST00000583721 112 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 SNRPGP19-201ENST00000603826 189 ntBASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.41□□□□□ -2.18
IGHV4-28A0A0C4DH34 AP000648.3-201ENST00000623539 4507 ntBASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 Y_RNA.52-201ENST00000362760 96 ntBASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 RNU4-52P-201ENST00000384209 138 ntBASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 RNU6-460P-201ENST00000391158 108 ntBASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 RNU7-197P-201ENST00000458836 62 ntBASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 AC079804.2-201ENST00000490376 200 ntBASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 AC079140.2-201ENST00000506193 142 ntBASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 AC008834.1-201ENST00000511612 175 ntBASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 RNU6-426P-201ENST00000516464 97 ntBASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 AC090821.2-201ENST00000523552 176 ntBASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 MIR548AR-201ENST00000582191 57 ntBASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 ZNF355P-201ENST00000427301 3216 ntBASIC1.4□□□□□ -2.19
IGHV4-28A0A0C4DH34 MTND5P32-201ENST00000560711 1802 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 Y_RNA.251-201ENST00000364551 99 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 RNA5SP138-201ENST00000365098 114 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 SNORA1.2-201ENST00000365189 134 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 Y_RNA.370-201ENST00000365589 108 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 Y_RNA.494-201ENST00000384432 111 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 SNORA20-201ENST00000384662 132 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 MIR570-201ENST00000384917 97 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 Y_RNA.584-201ENST00000391090 114 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 MIR3937-201ENST00000580135 106 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 MIR3935-201ENST00000583472 104 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 AC131055.1-201ENST00000584626 316 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 AL513534.2-201ENST00000603836 250 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.39□□□□□ -2.19
IGHV4-28A0A0C4DH34 Y_RNA.343-201ENST00000365354 112 ntBASIC1.38□□□□□ -2.19
IGHV4-28A0A0C4DH34 Y_RNA.440-201ENST00000384120 114 ntBASIC1.38□□□□□ -2.19
IGHV4-28A0A0C4DH34 SNX2P2-201ENST00000424553 323 ntBASIC1.38□□□□□ -2.19
IGHV4-28A0A0C4DH34 RPS26P48-201ENST00000491713 339 ntBASIC1.38□□□□□ -2.19
IGHV4-28A0A0C4DH34 SNORD111.1-201ENST00000516421 86 ntBASIC1.38□□□□□ -2.19
IGHV4-28A0A0C4DH34 RNU6-1149P-201ENST00000516810 97 ntBASIC1.38□□□□□ -2.19
IGHV4-28A0A0C4DH34 RNU6-295P-201ENST00000516901 104 ntBASIC1.38□□□□□ -2.19
IGHV4-28A0A0C4DH34 MIR3124-201ENST00000582636 67 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms