Protein–RNA interactions for Protein: A0A0B4J274

TRAV20, T-cell receptor alpha variable 20 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV20A0A0B4J274 SNORA77B-201ENST00000578179 125 ntBASIC2.12□□□□□ -2.07
TRAV20A0A0B4J274 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV20A0A0B4J274 SNORD115-40-201ENST00000606510 82 ntBASIC2.12□□□□□ -2.07
TRAV20A0A0B4J274 AC103810.8-201ENST00000607347 118 ntBASIC2.12□□□□□ -2.07
TRAV20A0A0B4J274 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAV20A0A0B4J274 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV20A0A0B4J274 RNU6-508P-201ENST00000363231 103 ntBASIC2.11□□□□□ -2.07
TRAV20A0A0B4J274 Y_RNA.370-201ENST00000365589 108 ntBASIC2.11□□□□□ -2.07
TRAV20A0A0B4J274 SNORA70B-201ENST00000384210 135 ntBASIC2.11□□□□□ -2.07
TRAV20A0A0B4J274 SNORA67.4-201ENST00000384688 142 ntBASIC2.11□□□□□ -2.07
TRAV20A0A0B4J274 AC107297.1-201ENST00000459991 176 ntBASIC2.11□□□□□ -2.07
TRAV20A0A0B4J274 RPS27P21-201ENST00000486977 252 ntBASIC2.11□□□□□ -2.07
TRAV20A0A0B4J274 RPS26P48-201ENST00000491713 339 ntBASIC2.11□□□□□ -2.07
TRAV20A0A0B4J274 MIR3121-201ENST00000579680 77 ntBASIC2.11□□□□□ -2.07
TRAV20A0A0B4J274 AC002984.1-201ENST00000591692 448 ntBASIC2.11□□□□□ -2.07
TRAV20A0A0B4J274 AL022345.2-201ENST00000606307 135 ntBASIC2.11□□□□□ -2.07
TRAV20A0A0B4J274 AC064859.1-201ENST00000624741 174 ntBASIC2.11□□□□□ -2.07
TRAV20A0A0B4J274 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
TRAV20A0A0B4J274 Y_RNA.218-201ENST00000364218 104 ntBASIC2.1□□□□□ -2.07
TRAV20A0A0B4J274 Y_RNA.351-201ENST00000365436 96 ntBASIC2.1□□□□□ -2.07
TRAV20A0A0B4J274 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TRAV20A0A0B4J274 RNU6-322P-201ENST00000516010 103 ntBASIC2.1□□□□□ -2.07
TRAV20A0A0B4J274 MIR514B-201ENST00000516774 80 ntBASIC2.1□□□□□ -2.07
TRAV20A0A0B4J274 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV20A0A0B4J274 AC104984.5-201ENST00000586878 94 ntBASIC2.1□□□□□ -2.07
TRAV20A0A0B4J274 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAV20A0A0B4J274 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 ZNF720P1-201ENST00000562403 1939 ntBASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 Y_RNA.494-201ENST00000384432 111 ntBASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 RNU7-80P-201ENST00000459562 61 ntBASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 RNA5SP320-201ENST00000516263 124 ntBASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 RNU6-62P-201ENST00000516526 102 ntBASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 RNU6-1234P-201ENST00000516877 103 ntBASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 SNORA74.3-201ENST00000517108 154 ntBASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 AC090049.2-201ENST00000550377 109 ntBASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 AC015688.6-201ENST00000577737 104 ntBASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 MIR548AR-201ENST00000582191 57 ntBASIC2.09□□□□□ -2.07
TRAV20A0A0B4J274 AP000648.3-201ENST00000623539 4507 ntBASIC2.09□□□□□ -2.08
TRAV20A0A0B4J274 MIR342-201ENST00000362212 99 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 Y_RNA.71-201ENST00000362892 104 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 Y_RNA.114-201ENST00000363265 113 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 RNU6-80P-201ENST00000384195 107 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 Y_RNA.454-201ENST00000384224 113 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 RNU6-22P-201ENST00000384355 107 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 MIR30A-201ENST00000385092 71 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 MIR653-201ENST00000385279 96 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 SNORD28B-201ENST00000390993 75 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 SNX2P2-201ENST00000424553 323 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 HMGN2P23-201ENST00000456759 269 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 Y_RNA.651-201ENST00000459380 103 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 RPL23AP42-201ENST00000471152 471 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 RPS29P24-201ENST00000486345 171 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 SNORA44.1-201ENST00000517031 108 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 MIR4448-201ENST00000584360 86 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
TRAV20A0A0B4J274 RNU1-133P-201ENST00000364867 167 ntBASIC2.07□□□□□ -2.08
TRAV20A0A0B4J274 AL451046.2-201ENST00000403074 277 ntBASIC2.07□□□□□ -2.08
TRAV20A0A0B4J274 RNU7-96P-201ENST00000459535 64 ntBASIC2.07□□□□□ -2.08
TRAV20A0A0B4J274 AC234781.5-201ENST00000508429 271 ntBASIC2.07□□□□□ -2.08
TRAV20A0A0B4J274 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TRAV20A0A0B4J274 MIR5092-201ENST00000583139 88 ntBASIC2.07□□□□□ -2.08
TRAV20A0A0B4J274 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.07□□□□□ -2.08
TRAV20A0A0B4J274 MIR8063-201ENST00000621930 81 ntBASIC2.07□□□□□ -2.08
TRAV20A0A0B4J274 AC091932.4-201ENST00000623386 200 ntBASIC2.07□□□□□ -2.08
TRAV20A0A0B4J274 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 AL596211.1-201ENST00000569873 2277 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 RNU6-235P-201ENST00000362644 107 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 U8.2-201ENST00000363156 134 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 RNU6-1067P-201ENST00000384752 107 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 MIR676-201ENST00000390702 67 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 AL359511.1-201ENST00000402970 211 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 MIR548I2-201ENST00000408348 149 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 MIR1261-201ENST00000408659 82 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 RNU4-53P-201ENST00000410828 140 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 AC008267.6-201ENST00000441664 139 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 snoU13.9-201ENST00000458927 103 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 AC005908.1-201ENST00000468701 347 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 RNU6-998P-201ENST00000515894 101 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 ZNF658B-202ENST00000615961 3375 ntBASIC2.06□□□□□ -2.08
TRAV20A0A0B4J274 Y_RNA.280-201ENST00000364765 112 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 SNORD116-14-201ENST00000383894 92 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 SNORD116-17-201ENST00000383929 92 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 SNORA70.7-201ENST00000384159 133 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 SNORD116-15-201ENST00000384445 92 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 SNORD116-19-201ENST00000384729 92 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 RNA5SP425-201ENST00000410336 112 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 RPS12P2-201ENST00000439728 269 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 AL158147.1-201ENST00000443970 75 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 RNU7-43P-201ENST00000516554 64 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 RNU6-113P-201ENST00000516653 101 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 MIR3124-201ENST00000582636 67 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 AL365222.1-201ENST00000614661 98 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 MIR6715A-201ENST00000615929 79 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 AP000553.5-201ENST00000641933 54 ntBASIC2.05□□□□□ -2.08
TRAV20A0A0B4J274 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms