Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 MIR215-201ENST00000384858 110 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR224-201ENST00000384889 81 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR196A2-201ENST00000385189 110 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-710P-201ENST00000410424 105 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 MTATP6P26-201ENST00000445926 662 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 AL138752.1-201ENST00000452964 351 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 RPL30P15-201ENST00000457129 321 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU2-60P-201ENST00000517290 128 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 AC006600.1-201ENST00000572529 153 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR2681-201ENST00000581814 105 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 AP000942.4-201ENST00000604811 241 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR3666-201ENST00000607845 111 ntBASIC-0.48□□□□□ -2.49
TRAV1-1A0A0B4J248 RNY3P3-201ENST00000363816 102 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU4-50P-201ENST00000364361 141 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 SNORD49B-201ENST00000365172 72 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.456-201ENST00000384232 111 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 AC096949.1-201ENST00000412047 152 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 RPS29P8-201ENST00000445109 171 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 AC019235.1-201ENST00000503847 207 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU7-115P-201ENST00000516433 55 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR4677-201ENST00000584153 80 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 AC124312.5-201ENST00000604451 268 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR6082-201ENST00000613604 109 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR548AZ-201ENST00000616567 95 ntBASIC-0.49□□□□□ -2.49
TRAV1-1A0A0B4J248 MTND5P26-201ENST00000426018 1752 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 MTND5P32-201ENST00000560711 1802 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 SNORD114-11-201ENST00000363738 75 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-483P-201ENST00000384088 108 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-708P-201ENST00000384217 107 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 RNA5SP25-201ENST00000410815 110 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 RPL21P38-201ENST00000418090 167 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 SNORD11-201ENST00000459124 84 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 snoU13.19-201ENST00000459148 104 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 AC026782.1-201ENST00000512952 449 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-566P-201ENST00000516790 107 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-765P-201ENST00000516916 99 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 AC022441.3-201ENST00000605737 136 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 RN7SL660P-201ENST00000614852 299 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR6128-201ENST00000615528 109 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 AP001282.2-201ENST00000616149 309 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR4788-201ENST00000639104 80 ntBASIC-0.5□□□□□ -2.49
TRAV1-1A0A0B4J248 RNA5SP245-201ENST00000364239 121 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 RNY4P3-201ENST00000365254 95 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.341-201ENST00000365341 102 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 SNORD14C-201ENST00000365382 88 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-597P-201ENST00000365620 102 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 SNORA32.3-201ENST00000384772 121 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 U8.15-201ENST00000390947 134 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 AL590004.1-201ENST00000405321 300 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 AC074085.1-201ENST00000413598 418 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 AF228730.4-201ENST00000421457 183 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-155P-201ENST00000516347 100 ntBASIC-0.51□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-626P-201ENST00000363354 107 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-926P-201ENST00000384075 107 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-20P-201ENST00000384106 107 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-30P-201ENST00000384561 107 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-535P-201ENST00000384722 107 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 SNORA40.5-201ENST00000391061 128 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 DEFB108C-201ENST00000400154 252 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 AL022718.1-201ENST00000412004 84 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 AC091951.2-201ENST00000500762 203 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU7-53P-201ENST00000516705 60 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 MTND3P12-201ENST00000559068 328 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR5706-201ENST00000579841 80 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 AC119751.7-201ENST00000600494 245 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 AC024933.1-201ENST00000608472 348 ntBASIC-0.52□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR655-201ENST00000362159 97 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-726P-201ENST00000364680 107 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 SNORD114-15-201ENST00000364687 72 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 Y_RNA.359-201ENST00000365498 102 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-480P-201ENST00000384332 107 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-831P-201ENST00000384548 107 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 SNORD75.1-201ENST00000408373 60 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 MIR548O-201ENST00000408583 114 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-938P-201ENST00000411285 103 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 AC244250.2-201ENST00000418731 148 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 MTND4P28-201ENST00000426217 387 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 RNU6-273P-201ENST00000516937 96 ntBASIC-0.53□□□□□ -2.49
TRAV1-1A0A0B4J248 AC007751.1-201ENST00000529260 376 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms