Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AC048334.1-201ENST00000477975 159 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 RNU4-57P-201ENST00000515980 135 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 RNU2-56P-201ENST00000516826 190 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 SNORA40.15-201ENST00000516884 107 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 SNORA74.3-201ENST00000517108 154 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 AL022345.2-201ENST00000606307 135 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 AC004832.4-201ENST00000608952 331 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 AC106754.2-201ENST00000623006 233 ntBASIC0.64□□□□□ -2.31
SHANK1Q9Y566 UBE2WP1-201ENST00000362030 340 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 Y_RNA.153-201ENST00000363615 91 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 RNU6-290P-201ENST00000365212 101 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 Y_RNA.394-201ENST00000383942 103 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 MIR146A-201ENST00000385201 99 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 MIR1298-201ENST00000408783 112 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.63□□□□□ -2.31
SHANK1Q9Y566 SNORD11-201ENST00000459124 84 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 SNORA18.4-201ENST00000516440 124 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 RNU6-570P-201ENST00000517051 105 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 RNU6-1096P-201ENST00000517089 102 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.63□□□□□ -2.31
SHANK1Q9Y566 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.63□□□□□ -2.31
SHANK1Q9Y566 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.63□□□□□ -2.31
SHANK1Q9Y566 AC136932.1-201ENST00000574771 208 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 MIR4719-201ENST00000585233 84 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SHANK1Q9Y566 AC131280.1-202ENST00000624067 4211 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 Y_RNA.183-201ENST00000363882 113 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 SNORA1.2-201ENST00000365189 134 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 RNU6-144P-201ENST00000383951 107 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 SNORA24-201ENST00000384096 131 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 MIR606-201ENST00000384851 96 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 RNU6-763P-201ENST00000390865 106 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 MIR548P-201ENST00000408336 84 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 snoU13.19-201ENST00000459148 104 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.63□□□□□ -2.31
SHANK1Q9Y566 SNORA31.2-201ENST00000516019 134 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 RPS29P30-201ENST00000600975 111 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 AC124312.5-201ENST00000604451 268 ntBASIC0.63□□□□□ -2.31
SHANK1Q9Y566 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
SHANK1Q9Y566 U8.5-201ENST00000364528 136 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 Y_RNA.276-201ENST00000364732 109 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 RNU6-1227P-201ENST00000383981 107 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 RNU6-21P-201ENST00000384710 107 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 AC092628.1-201ENST00000436250 252 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 snoU13.25-201ENST00000458945 104 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 RNU6-1143P-201ENST00000516125 104 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 Y_RNA.711-201ENST00000516993 102 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 RNU6-988P-201ENST00000519081 107 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 AC006441.5-201ENST00000612680 209 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 RNU6-639P-201ENST00000384074 107 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 Y_RNA.455-201ENST00000384230 98 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 MIR1265-201ENST00000408444 86 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 NDUFA4P2-201ENST00000489989 244 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 MRPS35P2-201ENST00000508242 191 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 RNU6-126P-201ENST00000516685 103 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.62□□□□□ -2.31
SHANK1Q9Y566 AC090142.3-201ENST00000519012 385 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 AP003072.1-201ENST00000531740 145 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 MIR4423-201ENST00000580922 80 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 uc_338.4-201ENST00000616635 176 ntBASIC0.62□□□□□ -2.31
SHANK1Q9Y566 RNU6-1272P-201ENST00000362776 107 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 RNU6-1323P-201ENST00000384025 107 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 MIR200A-201ENST00000384875 90 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 MIR136-201ENST00000385207 82 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 MTCO2P12-201ENST00000427426 682 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.61□□□□□ -2.31
SHANK1Q9Y566 DYNLT3P2-201ENST00000442517 295 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 RPS26P48-201ENST00000491713 339 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 RNU6-322P-201ENST00000516010 103 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 RNU7-43P-201ENST00000516554 64 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 RNA5SP285-201ENST00000516619 119 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 RNU6-63P-201ENST00000516690 95 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 RNU6-1137P-201ENST00000517073 99 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.61□□□□□ -2.31
SHANK1Q9Y566 MIR548AY-201ENST00000617669 107 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 MIR8063-201ENST00000621930 81 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 AC068647.2-201ENST00000637380 353 ntBASIC0.61□□□□□ -2.31
SHANK1Q9Y566 MIR335-201ENST00000362173 94 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 Y_RNA.84-201ENST00000363011 104 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 Y_RNA.128-201ENST00000363391 112 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 Y_RNA.133-201ENST00000363428 110 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 RNA5SP48-201ENST00000363969 126 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 RNU6-163P-201ENST00000384396 106 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 RNU6-125P-201ENST00000384505 107 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 MLLT10P1-201ENST00000418346 262 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.6□□□□□ -2.31
SHANK1Q9Y566 MTCYBP6-201ENST00000441810 138 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 RNU7-90P-201ENST00000459216 62 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 AC010655.3-201ENST00000478818 450 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 SNORA31.10-201ENST00000516482 106 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 RNU6-229P-201ENST00000516614 102 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 AC007751.1-201ENST00000529260 376 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 RPL23AP91-201ENST00000569211 455 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 MIR5688-201ENST00000580619 83 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 AC006006.1-201ENST00000603082 144 ntBASIC0.6□□□□□ -2.31
SHANK1Q9Y566 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.6□□□□□ -2.31
SHANK1Q9Y566 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.6□□□□□ -2.31
SHANK1Q9Y566 Y_RNA.148-201ENST00000363557 117 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms