Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 RNU7-12P-201ENST00000516030 62 ntBASIC3.08□□□□□ -1.92
NOD1Q9Y239 RNU2-35P-201ENST00000516446 142 ntBASIC3.08□□□□□ -1.92
NOD1Q9Y239 RNU7-181P-201ENST00000517234 74 ntBASIC3.08□□□□□ -1.92
NOD1Q9Y239 AC090821.2-201ENST00000523552 176 ntBASIC3.08□□□□□ -1.92
NOD1Q9Y239 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
NOD1Q9Y239 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
NOD1Q9Y239 RNU1-112P-201ENST00000364401 164 ntBASIC3.07□□□□□ -1.92
NOD1Q9Y239 Y_RNA.344-201ENST00000365381 112 ntBASIC3.07□□□□□ -1.92
NOD1Q9Y239 Y_RNA.494-201ENST00000384432 111 ntBASIC3.07□□□□□ -1.92
NOD1Q9Y239 RNU6-905P-201ENST00000384434 107 ntBASIC3.07□□□□□ -1.92
NOD1Q9Y239 MIR548D2-201ENST00000384955 97 ntBASIC3.07□□□□□ -1.92
NOD1Q9Y239 RNA5SP21-201ENST00000410917 96 ntBASIC3.07□□□□□ -1.92
NOD1Q9Y239 AL035398.1-201ENST00000430869 322 ntBASIC3.07□□□□□ -1.92
NOD1Q9Y239 RNU6-998P-201ENST00000515894 101 ntBASIC3.07□□□□□ -1.92
NOD1Q9Y239 AC068339.1-201ENST00000526965 141 ntBASIC3.07□□□□□ -1.92
NOD1Q9Y239 MIR5009-201ENST00000578736 100 ntBASIC3.07□□□□□ -1.92
NOD1Q9Y239 AP001318.4-201ENST00000616637 121 ntBASIC3.07□□□□□ -1.92
NOD1Q9Y239 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.07□□□□□ -1.92
NOD1Q9Y239 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
NOD1Q9Y239 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NOD1Q9Y239 AC007336.1-201ENST00000576365 3828 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NOD1Q9Y239 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC3.06□□□□□ -1.92
NOD1Q9Y239 MIR302B-201ENST00000362188 73 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-34-201ENST00000362441 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-12-201ENST00000362583 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-29-201ENST00000362834 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-9-201ENST00000362912 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-21-201ENST00000362963 81 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-14-201ENST00000363090 81 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-13-201ENST00000363358 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-41-201ENST00000363608 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-11-201ENST00000363616 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-5-201ENST00000363633 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-39-201ENST00000363694 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-4-201ENST00000363810 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-16-201ENST00000363887 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-6-201ENST00000363942 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-42-201ENST00000364273 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-15-201ENST00000364809 81 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-1-201ENST00000364961 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-26-201ENST00000365067 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-10-201ENST00000365073 81 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-43-201ENST00000365503 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-36-201ENST00000365629 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 MIR512-1-201ENST00000384913 84 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 MIR518A2-201ENST00000384966 87 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 RNA5SP465-201ENST00000391195 109 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 MIR1261-201ENST00000408659 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 MIR1267-201ENST00000408723 78 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.06□□□□□ -1.92
NOD1Q9Y239 AL513328.1-201ENST00000446460 224 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 RNU7-96P-201ENST00000459535 64 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 AC008413.1-201ENST00000511864 177 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 RNVU1-2-201ENST00000516326 135 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 IGLV3-17-201ENST00000519099 244 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 MIR3163-201ENST00000581592 73 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.06□□□□□ -1.92
NOD1Q9Y239 SNORD115-40-201ENST00000606510 82 ntBASIC3.06□□□□□ -1.92
NOD1Q9Y239 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
NOD1Q9Y239 RNU6-805P-201ENST00000365643 106 ntBASIC3.05□□□□□ -1.92
NOD1Q9Y239 SNORA51.10-201ENST00000384418 136 ntBASIC3.05□□□□□ -1.92
NOD1Q9Y239 RNU6-1031P-201ENST00000384773 107 ntBASIC3.05□□□□□ -1.92
NOD1Q9Y239 RNA5SP492-201ENST00000411330 114 ntBASIC3.05□□□□□ -1.92
NOD1Q9Y239 RPS27P29-201ENST00000463110 252 ntBASIC3.05□□□□□ -1.92
NOD1Q9Y239 MIR4658-201ENST00000584344 65 ntBASIC3.05□□□□□ -1.92
NOD1Q9Y239 ZNF861P-201ENST00000588126 639 ntBASIC3.05□□□□□ -1.92
NOD1Q9Y239 MIR6817-201ENST00000615588 66 ntBASIC3.05□□□□□ -1.92
NOD1Q9Y239 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NOD1Q9Y239 RNU6-640P-201ENST00000363693 105 ntBASIC3.04□□□□□ -1.92
NOD1Q9Y239 RNA5SP68-201ENST00000363885 119 ntBASIC3.04□□□□□ -1.92
NOD1Q9Y239 RNU2-7P-201ENST00000410794 178 ntBASIC3.04□□□□□ -1.92
NOD1Q9Y239 UQCRHP3-201ENST00000451503 251 ntBASIC3.04□□□□□ -1.92
NOD1Q9Y239 AL442644.1-201ENST00000454390 3105 ntBASIC3.04□□□□□ -1.92
NOD1Q9Y239 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NOD1Q9Y239 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NOD1Q9Y239 SNORA46-201ENST00000384762 135 ntBASIC3.03□□□□□ -1.92
NOD1Q9Y239 MIR520A-201ENST00000384862 85 ntBASIC3.03□□□□□ -1.92
NOD1Q9Y239 MIR516B2-201ENST00000385190 85 ntBASIC3.03□□□□□ -1.92
NOD1Q9Y239 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.03□□□□□ -1.92
NOD1Q9Y239 RNA5SP144-201ENST00000410846 116 ntBASIC3.02□□□□□ -1.93
NOD1Q9Y239 RNU2-11P-201ENST00000459191 187 ntBASIC3.02□□□□□ -1.93
NOD1Q9Y239 AC107297.1-201ENST00000459991 176 ntBASIC3.02□□□□□ -1.93
NOD1Q9Y239 SNORA31.4-201ENST00000516049 129 ntBASIC3.02□□□□□ -1.93
NOD1Q9Y239 SCARNA16.3-201ENST00000516595 184 ntBASIC3.02□□□□□ -1.93
NOD1Q9Y239 RNU7-6P-201ENST00000516845 62 ntBASIC3.02□□□□□ -1.93
NOD1Q9Y239 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NOD1Q9Y239 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
NOD1Q9Y239 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
NOD1Q9Y239 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NOD1Q9Y239 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NOD1Q9Y239 Y_RNA.544-201ENST00000384650 113 ntBASIC3.01□□□□□ -1.93
NOD1Q9Y239 MIR452-201ENST00000385020 85 ntBASIC3.01□□□□□ -1.93
NOD1Q9Y239 SNORA48.1-201ENST00000390879 135 ntBASIC3.01□□□□□ -1.93
NOD1Q9Y239 HMGN2P39-201ENST00000398005 273 ntBASIC3.01□□□□□ -1.93
NOD1Q9Y239 AL022718.1-201ENST00000412004 84 ntBASIC3.01□□□□□ -1.93
NOD1Q9Y239 RNU7-34P-201ENST00000459394 64 ntBASIC3.01□□□□□ -1.93
NOD1Q9Y239 RPL23AP63-201ENST00000498752 471 ntBASIC3.01□□□□□ -1.93
NOD1Q9Y239 SNORA40.13-201ENST00000516379 120 ntBASIC3.01□□□□□ -1.93
NOD1Q9Y239 RNA5SP148-201ENST00000516527 94 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 285.4 ms