Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SNORD11-201ENST00000459124 84 ntBASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 CYCTP-201ENST00000504253 315 ntBASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.674-201ENST00000516362 113 ntBASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 MIR3668-201ENST00000582138 75 ntBASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 AP001485.1-201ENST00000604799 199 ntBASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 AL021707.8-201ENST00000609428 183 ntBASIC2.39□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.29-201ENST00000362570 113 ntBASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.121-201ENST00000363309 113 ntBASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 snoU2-30.1-201ENST00000365012 70 ntBASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.785-201ENST00000384290 109 ntBASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 RNU6-163P-201ENST00000384396 106 ntBASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 MIR802-201ENST00000390235 94 ntBASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 RNU6-1228P-201ENST00000391014 107 ntBASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 RNA5SP445-201ENST00000515889 115 ntBASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 RNU6-126P-201ENST00000516685 103 ntBASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 uc_338.4-201ENST00000616635 176 ntBASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 MIR8063-201ENST00000621930 81 ntBASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 AC027279.3-201ENST00000625055 122 ntBASIC2.38□□□□□ -2.03
CDK11AQ9UQ88 RNU6-1123P-201ENST00000362347 106 ntBASIC2.37□□□□□ -2.03
CDK11AQ9UQ88 RNU6-424P-201ENST00000384367 105 ntBASIC2.37□□□□□ -2.03
CDK11AQ9UQ88 RNU4-70P-201ENST00000384579 139 ntBASIC2.37□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.572-201ENST00000384757 98 ntBASIC2.37□□□□□ -2.03
CDK11AQ9UQ88 MIR1323-201ENST00000408090 73 ntBASIC2.37□□□□□ -2.03
CDK11AQ9UQ88 HMGN2P32-201ENST00000444648 269 ntBASIC2.37□□□□□ -2.03
CDK11AQ9UQ88 RNA5SP168-201ENST00000516642 112 ntBASIC2.37□□□□□ -2.03
CDK11AQ9UQ88 AC120024.3-201ENST00000603167 156 ntBASIC2.37□□□□□ -2.03
CDK11AQ9UQ88 SNORD33-201ENST00000362761 85 ntBASIC2.36□□□□□ -2.03
CDK11AQ9UQ88 snoU2_19.4-201ENST00000364329 80 ntBASIC2.36□□□□□ -2.03
CDK11AQ9UQ88 SNORA12.1-201ENST00000390873 148 ntBASIC2.36□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.587-201ENST00000391210 103 ntBASIC2.36□□□□□ -2.03
CDK11AQ9UQ88 AC245047.8-201ENST00000456455 284 ntBASIC2.36□□□□□ -2.03
CDK11AQ9UQ88 AC099513.1-201ENST00000490423 301 ntBASIC2.36□□□□□ -2.03
CDK11AQ9UQ88 SNORA81.3-201ENST00000517283 198 ntBASIC2.36□□□□□ -2.03
CDK11AQ9UQ88 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.36□□□□□ -2.03
CDK11AQ9UQ88 AL049861.1-201ENST00000603130 150 ntBASIC2.36□□□□□ -2.03
CDK11AQ9UQ88 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.36□□□□□ -2.03
CDK11AQ9UQ88 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.435-201ENST00000384095 112 ntBASIC2.35□□□□□ -2.03
CDK11AQ9UQ88 MIR1276-201ENST00000408707 83 ntBASIC2.35□□□□□ -2.03
CDK11AQ9UQ88 CALM2P4-201ENST00000430810 426 ntBASIC2.35□□□□□ -2.03
CDK11AQ9UQ88 RNU7-12P-201ENST00000516030 62 ntBASIC2.35□□□□□ -2.03
CDK11AQ9UQ88 RNU6-182P-201ENST00000516970 105 ntBASIC2.35□□□□□ -2.03
CDK11AQ9UQ88 MIR4662B-201ENST00000579498 81 ntBASIC2.35□□□□□ -2.03
CDK11AQ9UQ88 MIR4308-201ENST00000580634 81 ntBASIC2.35□□□□□ -2.03
CDK11AQ9UQ88 MIR4744-201ENST00000581563 82 ntBASIC2.35□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.116-201ENST00000363292 103 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 RNA5SP363-201ENST00000365072 115 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.355-201ENST00000365462 98 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 Y_RNA.571-201ENST00000384753 98 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 U8.16-201ENST00000391279 133 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 AL606845.1-201ENST00000404881 255 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 MTND5P15-201ENST00000434246 349 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 SNORD45.4-201ENST00000516629 73 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 RNU1-92P-201ENST00000517017 135 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 AP002392.1-201ENST00000537692 208 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 AC072026.1-201ENST00000605023 201 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 SNORD3E-202ENST00000627253 216 ntBASIC2.34□□□□□ -2.03
CDK11AQ9UQ88 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 MIRLET7C-201ENST00000362160 84 ntBASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 MIR302D-201ENST00000362275 68 ntBASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 SNORD14E-201ENST00000364009 85 ntBASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 Y_RNA.336-201ENST00000365307 109 ntBASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 MIR660-201ENST00000385235 97 ntBASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 RNU6-918P-201ENST00000391219 106 ntBASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 MIR891A-201ENST00000401237 79 ntBASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 RNU2-55P-201ENST00000411146 174 ntBASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 AL161935.2-201ENST00000414627 60 ntBASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 NDUFA4P2-201ENST00000489989 244 ntBASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 Y_RNA.797-201ENST00000515977 94 ntBASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 RNU2-4P-201ENST00000606190 192 ntBASIC2.33□□□□□ -2.04
CDK11AQ9UQ88 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDK11AQ9UQ88 RNU6-833P-201ENST00000363486 107 ntBASIC2.32□□□□□ -2.04
CDK11AQ9UQ88 RNU6-1138P-201ENST00000365359 106 ntBASIC2.32□□□□□ -2.04
CDK11AQ9UQ88 RNU6-728P-201ENST00000365375 104 ntBASIC2.32□□□□□ -2.04
CDK11AQ9UQ88 RNU6-442P-201ENST00000383968 104 ntBASIC2.32□□□□□ -2.04
CDK11AQ9UQ88 MIR518E-201ENST00000385252 88 ntBASIC2.32□□□□□ -2.04
CDK11AQ9UQ88 SNORD77.4-201ENST00000516158 81 ntBASIC2.32□□□□□ -2.04
CDK11AQ9UQ88 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.32□□□□□ -2.04
CDK11AQ9UQ88 AC008507.4-201ENST00000585464 127 ntBASIC2.32□□□□□ -2.04
CDK11AQ9UQ88 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CDK11AQ9UQ88 SNORD50B-201ENST00000364995 70 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 RNU6-203P-201ENST00000384038 104 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 MIR194-1-201ENST00000384892 85 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 MT-TT-201ENST00000387460 66 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 SNORA26-201ENST00000391286 122 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 PIGPP3-201ENST00000425307 415 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 AC079140.2-201ENST00000506193 142 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 AC114811.1-201ENST00000507207 168 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 SCARNA8-201ENST00000515924 131 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 RNU7-149P-201ENST00000516739 59 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 RNU6-453P-201ENST00000516819 85 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 RNU6-902P-201ENST00000517212 91 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 MIR6504-201ENST00000613520 61 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 Pinc.1-201ENST00000616452 154 ntBASIC2.31□□□□□ -2.04
CDK11AQ9UQ88 Y_RNA.182-201ENST00000363880 111 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms