Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC245047.8-201ENST00000456455 284 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 SNORD65B-201ENST00000459126 73 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 AC117454.1-201ENST00000491120 168 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 RN7SKP179-201ENST00000516126 217 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 RNU6-1337P-201ENST00000516525 95 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 AC006380.1-201ENST00000603598 186 ntBASIC1.4□□□□□ -2.19
CLIP2Q9UDT6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.272-201ENST00000364696 102 ntBASIC1.39□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.293-201ENST00000364908 93 ntBASIC1.39□□□□□ -2.19
CLIP2Q9UDT6 RNU6-1240P-201ENST00000365155 104 ntBASIC1.39□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.368-201ENST00000365547 113 ntBASIC1.39□□□□□ -2.19
CLIP2Q9UDT6 RNU4-17P-201ENST00000365598 141 ntBASIC1.39□□□□□ -2.19
CLIP2Q9UDT6 RNU6-969P-201ENST00000383900 105 ntBASIC1.39□□□□□ -2.19
CLIP2Q9UDT6 MIR1253-201ENST00000408273 105 ntBASIC1.39□□□□□ -2.19
CLIP2Q9UDT6 AC079140.2-201ENST00000506193 142 ntBASIC1.39□□□□□ -2.19
CLIP2Q9UDT6 RNA5SP102-201ENST00000516865 106 ntBASIC1.39□□□□□ -2.19
CLIP2Q9UDT6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.39□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.7-201ENST00000362352 102 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 SNORA27.1-201ENST00000362604 124 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 RNU5F-3P-201ENST00000363767 117 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 RNU6-407P-201ENST00000365280 104 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.441-201ENST00000384123 112 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 MIR626-201ENST00000385032 94 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 RNA5SP511-201ENST00000410487 115 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 RPS27P16-201ENST00000425758 201 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 AL606753.1-201ENST00000427435 87 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 AL392103.1-201ENST00000447000 198 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 SNORD116-25-201ENST00000516517 92 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 MIR4709-201ENST00000577272 72 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 AC108706.1-201ENST00000611053 297 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 AC068647.2-201ENST00000637380 353 ntBASIC1.38□□□□□ -2.19
CLIP2Q9UDT6 SNORA4.2-201ENST00000365313 147 ntBASIC1.37□□□□□ -2.19
CLIP2Q9UDT6 RNU6-1336P-201ENST00000383886 109 ntBASIC1.37□□□□□ -2.19
CLIP2Q9UDT6 SNORA20-201ENST00000384662 132 ntBASIC1.37□□□□□ -2.19
CLIP2Q9UDT6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.37□□□□□ -2.19
CLIP2Q9UDT6 RNU6-426P-201ENST00000516464 97 ntBASIC1.37□□□□□ -2.19
CLIP2Q9UDT6 AC019176.1-201ENST00000518519 225 ntBASIC1.37□□□□□ -2.19
CLIP2Q9UDT6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.37□□□□□ -2.19
CLIP2Q9UDT6 AL078604.3-201ENST00000615580 211 ntBASIC1.37□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.75-201ENST00000362927 97 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 RNU4-84P-201ENST00000364200 139 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.229-201ENST00000364347 113 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 RNU6-117P-201ENST00000365415 107 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 RNU6-950P-201ENST00000384651 107 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 RNU6-578P-201ENST00000390980 103 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 RNA5SP467-201ENST00000391274 118 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 MIR873-201ENST00000401120 77 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 RPS26P45-201ENST00000471748 340 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 RPL30P7-201ENST00000479312 323 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 AL163195.1-201ENST00000496941 348 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 RNU7-115P-201ENST00000516433 55 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 RNU6-1007P-201ENST00000516586 107 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 MIR3937-201ENST00000580135 106 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 AL929325.1-201ENST00000603096 117 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 U6.108-201ENST00000637764 58 ntBASIC1.36□□□□□ -2.19
CLIP2Q9UDT6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 RNU6-151P-201ENST00000364158 107 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 SNORA25.8-201ENST00000364831 128 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 RNU6-275P-201ENST00000364910 107 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 RNY1P5-201ENST00000383890 115 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.456-201ENST00000384232 111 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 MIR569-201ENST00000385228 96 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 RNU6-1228P-201ENST00000391014 107 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 RNA5SP323-201ENST00000391094 133 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 MIR1285-1-201ENST00000408593 84 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 RPS27P1-201ENST00000450552 247 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 RNA5SP20-201ENST00000515976 84 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 RNU1-142P-201ENST00000516682 145 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 AC109810.1-201ENST00000534066 224 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 AL359075.3-201ENST00000613288 217 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 MIR548AY-201ENST00000617669 107 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
CLIP2Q9UDT6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 MIR96-201ENST00000362288 78 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 RNU6-1205P-201ENST00000363625 106 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 RNU6-899P-201ENST00000363947 107 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 RNU6-704P-201ENST00000364162 103 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 SNORA8.3-201ENST00000384679 139 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 MIR618-201ENST00000385287 98 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 SNORA36B-201ENST00000410438 131 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.622-201ENST00000411091 108 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.797-201ENST00000515977 94 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 RNU6-789P-201ENST00000517105 102 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 RNU7-128P-201ENST00000517247 62 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 MIR4744-201ENST00000581563 82 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 MIR6504-201ENST00000613520 61 ntBASIC1.34□□□□□ -2.19
CLIP2Q9UDT6 Y_RNA.802-201ENST00000614892 130 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms