Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.68□□□□□ -2.14
LRFN1Q9P244 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LRFN1Q9P244 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
LRFN1Q9P244 Y_RNA.7-201ENST00000362352 102 ntBASIC1.67□□□□□ -2.14
LRFN1Q9P244 RNU6-457P-201ENST00000363999 107 ntBASIC1.67□□□□□ -2.14
LRFN1Q9P244 Y_RNA.229-201ENST00000364347 113 ntBASIC1.67□□□□□ -2.14
LRFN1Q9P244 snoU2-30.1-201ENST00000365012 70 ntBASIC1.67□□□□□ -2.14
LRFN1Q9P244 Y_RNA.571-201ENST00000384753 98 ntBASIC1.67□□□□□ -2.14
LRFN1Q9P244 MIR9-3-201ENST00000385084 90 ntBASIC1.67□□□□□ -2.14
LRFN1Q9P244 MT-TT-201ENST00000387460 66 ntBASIC1.67□□□□□ -2.14
LRFN1Q9P244 RN7SKP51-201ENST00000410781 304 ntBASIC1.67□□□□□ -2.14
LRFN1Q9P244 PIGPP3-201ENST00000425307 415 ntBASIC1.67□□□□□ -2.14
LRFN1Q9P244 AP002392.1-201ENST00000537692 208 ntBASIC1.67□□□□□ -2.14
LRFN1Q9P244 RPL23AP91-201ENST00000569211 455 ntBASIC1.67□□□□□ -2.14
LRFN1Q9P244 RNU2-4P-201ENST00000606190 192 ntBASIC1.67□□□□□ -2.14
LRFN1Q9P244 Y_RNA.242-201ENST00000364473 110 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 MIR616-201ENST00000385293 97 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 RNA5SP496-201ENST00000391240 109 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 AC245047.8-201ENST00000456455 284 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 RNU7-120P-201ENST00000459334 63 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 SNORD45.4-201ENST00000516629 73 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 AC090049.2-201ENST00000550377 109 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 AC024614.2-201ENST00000577584 372 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.66□□□□□ -2.14
LRFN1Q9P244 AL513534.2-201ENST00000603836 250 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 AC072026.1-201ENST00000605023 201 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 AL121890.5-201ENST00000620848 304 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 AC106754.2-201ENST00000623006 233 ntBASIC1.66□□□□□ -2.14
LRFN1Q9P244 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.14
LRFN1Q9P244 MIR337-201ENST00000362281 93 ntBASIC1.65□□□□□ -2.15
LRFN1Q9P244 Y_RNA.233-201ENST00000364407 101 ntBASIC1.65□□□□□ -2.15
LRFN1Q9P244 SNORA16.1-201ENST00000364597 132 ntBASIC1.65□□□□□ -2.15
LRFN1Q9P244 SNORA2.2-201ENST00000365473 135 ntBASIC1.65□□□□□ -2.15
LRFN1Q9P244 Y_RNA.435-201ENST00000384095 112 ntBASIC1.65□□□□□ -2.15
LRFN1Q9P244 RN7SKP101-201ENST00000411376 320 ntBASIC1.65□□□□□ -2.15
LRFN1Q9P244 HMGN2P32-201ENST00000444648 269 ntBASIC1.65□□□□□ -2.15
LRFN1Q9P244 RPS29P11-201ENST00000496507 171 ntBASIC1.65□□□□□ -2.15
LRFN1Q9P244 RN7SKP164-201ENST00000516138 266 ntBASIC1.65□□□□□ -2.15
LRFN1Q9P244 RNU6-917P-201ENST00000516294 104 ntBASIC1.65□□□□□ -2.15
LRFN1Q9P244 MIR3122-201ENST00000577243 73 ntBASIC1.65□□□□□ -2.15
LRFN1Q9P244 AL021707.8-201ENST00000609428 183 ntBASIC1.65□□□□□ -2.15
LRFN1Q9P244 Y_RNA.121-201ENST00000363309 113 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 RNU6-682P-201ENST00000363843 106 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 SNORD50B-201ENST00000364995 70 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 RNU4-70P-201ENST00000384579 139 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 MIR452-201ENST00000385020 85 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 MIR802-201ENST00000390235 94 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 RNU6-321P-201ENST00000410912 106 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 BTF3P4-201ENST00000418852 495 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 SNORD11-201ENST00000459124 84 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 RPL30P7-201ENST00000479312 323 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 NDUFA4P2-201ENST00000489989 244 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.64□□□□□ -2.15
LRFN1Q9P244 RNU6-1219P-201ENST00000516143 112 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 RNU6-861P-201ENST00000516745 106 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 AL512310.8-201ENST00000550183 120 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.64□□□□□ -2.15
LRFN1Q9P244 MIR4744-201ENST00000581563 82 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 MIR8081-201ENST00000611533 95 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 FTX_2.1-201ENST00000618816 94 ntBASIC1.64□□□□□ -2.15
LRFN1Q9P244 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LRFN1Q9P244 RNU6-103P-201ENST00000363686 107 ntBASIC1.63□□□□□ -2.15
LRFN1Q9P244 Y_RNA.182-201ENST00000363880 111 ntBASIC1.63□□□□□ -2.15
LRFN1Q9P244 SNORD14E-201ENST00000364009 85 ntBASIC1.63□□□□□ -2.15
LRFN1Q9P244 Y_RNA.336-201ENST00000365307 109 ntBASIC1.63□□□□□ -2.15
LRFN1Q9P244 MIR526A1-201ENST00000384897 85 ntBASIC1.63□□□□□ -2.15
LRFN1Q9P244 Y_RNA.587-201ENST00000391210 103 ntBASIC1.63□□□□□ -2.15
LRFN1Q9P244 AL627390.1-201ENST00000396055 340 ntBASIC1.63□□□□□ -2.15
LRFN1Q9P244 AL606845.1-201ENST00000404881 255 ntBASIC1.63□□□□□ -2.15
LRFN1Q9P244 RNU6-322P-201ENST00000516010 103 ntBASIC1.63□□□□□ -2.15
LRFN1Q9P244 AL049861.1-201ENST00000603130 150 ntBASIC1.63□□□□□ -2.15
LRFN1Q9P244 AC098479.1-201ENST00000609225 154 ntBASIC1.63□□□□□ -2.15
LRFN1Q9P244 AL391903.3-201ENST00000612158 163 ntBASIC1.63□□□□□ -2.15
LRFN1Q9P244 AL442644.1-201ENST00000454390 3105 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 Y_RNA.118-201ENST00000363300 101 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 RNU6-578P-201ENST00000390980 103 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 RNU6-1228P-201ENST00000391014 107 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 Y_RNA.797-201ENST00000515977 94 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 RNU6-561P-201ENST00000516222 102 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 MIR3664-201ENST00000579074 99 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 MIR3683-201ENST00000580847 82 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 AC008507.4-201ENST00000585464 127 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LRFN1Q9P244 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 AC108706.1-201ENST00000611053 297 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 uc_338.4-201ENST00000616635 176 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 U6.106-201ENST00000636360 105 ntBASIC1.62□□□□□ -2.15
LRFN1Q9P244 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LRFN1Q9P244 Y_RNA.150-201ENST00000363562 102 ntBASIC1.61□□□□□ -2.15
LRFN1Q9P244 Y_RNA.412-201ENST00000384001 104 ntBASIC1.61□□□□□ -2.15
LRFN1Q9P244 SNORD41-201ENST00000386967 70 ntBASIC1.61□□□□□ -2.15
LRFN1Q9P244 SNRPGP8-201ENST00000454064 226 ntBASIC1.61□□□□□ -2.15
LRFN1Q9P244 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LRFN1Q9P244 Y_RNA.75-201ENST00000362927 97 ntBASIC1.6□□□□□ -2.15
LRFN1Q9P244 Y_RNA.240-201ENST00000364469 95 ntBASIC1.6□□□□□ -2.15
LRFN1Q9P244 Y_RNA.270-201ENST00000364693 104 ntBASIC1.6□□□□□ -2.15
LRFN1Q9P244 RNY3P5-201ENST00000384127 102 ntBASIC1.6□□□□□ -2.15
LRFN1Q9P244 AL451046.2-201ENST00000403074 277 ntBASIC1.6□□□□□ -2.15
LRFN1Q9P244 RNU4-62P-201ENST00000410125 130 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms