Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 AC063976.4-201ENST00000421971 163 ntBASIC2.93□□□□□ -1.94
CXXC1Q9P0U4 RNU6-830P-201ENST00000516353 107 ntBASIC2.93□□□□□ -1.94
CXXC1Q9P0U4 MIR4709-201ENST00000577272 72 ntBASIC2.93□□□□□ -1.94
CXXC1Q9P0U4 ZNF861P-201ENST00000588126 639 ntBASIC2.93□□□□□ -1.94
CXXC1Q9P0U4 SNORD14A-201ENST00000606526 91 ntBASIC2.93□□□□□ -1.94
CXXC1Q9P0U4 Y_RNA.241-201ENST00000364470 117 ntBASIC2.92□□□□□ -1.94
CXXC1Q9P0U4 MIR452-201ENST00000385020 85 ntBASIC2.92□□□□□ -1.94
CXXC1Q9P0U4 RNA5SP385-201ENST00000515947 110 ntBASIC2.92□□□□□ -1.94
CXXC1Q9P0U4 MIR4506-201ENST00000584693 77 ntBASIC2.92□□□□□ -1.94
CXXC1Q9P0U4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.92□□□□□ -1.94
CXXC1Q9P0U4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
CXXC1Q9P0U4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.92□□□□□ -1.94
CXXC1Q9P0U4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CXXC1Q9P0U4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CXXC1Q9P0U4 RNU6-112P-201ENST00000363599 104 ntBASIC2.91□□□□□ -1.94
CXXC1Q9P0U4 SNORD114-30-201ENST00000364448 72 ntBASIC2.91□□□□□ -1.94
CXXC1Q9P0U4 MIR570-201ENST00000384917 97 ntBASIC2.91□□□□□ -1.94
CXXC1Q9P0U4 snoU13.27-201ENST00000459278 104 ntBASIC2.91□□□□□ -1.94
CXXC1Q9P0U4 AL353997.5-201ENST00000618886 171 ntBASIC2.91□□□□□ -1.94
CXXC1Q9P0U4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
CXXC1Q9P0U4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CXXC1Q9P0U4 AL596211.1-201ENST00000569873 2277 ntBASIC2.9□□□□□ -1.94
CXXC1Q9P0U4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.9□□□□□ -1.95
CXXC1Q9P0U4 Y_RNA.164-201ENST00000363709 102 ntBASIC2.9□□□□□ -1.95
CXXC1Q9P0U4 Y_RNA.226-201ENST00000364337 114 ntBASIC2.9□□□□□ -1.95
CXXC1Q9P0U4 SNORA27-201ENST00000384323 126 ntBASIC2.9□□□□□ -1.95
CXXC1Q9P0U4 MIR512-1-201ENST00000384913 84 ntBASIC2.9□□□□□ -1.95
CXXC1Q9P0U4 RN7SKP223-201ENST00000410582 62 ntBASIC2.9□□□□□ -1.95
CXXC1Q9P0U4 RNU6-412P-201ENST00000516434 106 ntBASIC2.9□□□□□ -1.95
CXXC1Q9P0U4 RNA5SP437-201ENST00000517249 129 ntBASIC2.9□□□□□ -1.95
CXXC1Q9P0U4 MIR4529-201ENST00000578110 78 ntBASIC2.9□□□□□ -1.95
CXXC1Q9P0U4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.9□□□□□ -1.95
CXXC1Q9P0U4 RNU6-349P-201ENST00000362402 107 ntBASIC2.89□□□□□ -1.95
CXXC1Q9P0U4 U8.17-201ENST00000391292 132 ntBASIC2.89□□□□□ -1.95
CXXC1Q9P0U4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.89□□□□□ -1.95
CXXC1Q9P0U4 AC021443.1-201ENST00000604478 211 ntBASIC2.89□□□□□ -1.95
CXXC1Q9P0U4 AC091932.4-201ENST00000623386 200 ntBASIC2.89□□□□□ -1.95
CXXC1Q9P0U4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CXXC1Q9P0U4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CXXC1Q9P0U4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.95
CXXC1Q9P0U4 Y_RNA.213-201ENST00000364178 111 ntBASIC2.88□□□□□ -1.95
CXXC1Q9P0U4 RNU6-296P-201ENST00000384608 107 ntBASIC2.88□□□□□ -1.95
CXXC1Q9P0U4 MIR759-201ENST00000390224 91 ntBASIC2.88□□□□□ -1.95
CXXC1Q9P0U4 SNX2P2-201ENST00000424553 323 ntBASIC2.88□□□□□ -1.95
CXXC1Q9P0U4 AL035398.1-201ENST00000430869 322 ntBASIC2.88□□□□□ -1.95
CXXC1Q9P0U4 AC107297.1-201ENST00000459991 176 ntBASIC2.88□□□□□ -1.95
CXXC1Q9P0U4 RNA5SP320-201ENST00000516263 124 ntBASIC2.88□□□□□ -1.95
CXXC1Q9P0U4 IGLV3-17-201ENST00000519099 244 ntBASIC2.88□□□□□ -1.95
CXXC1Q9P0U4 AL513423.1-201ENST00000621695 132 ntBASIC2.88□□□□□ -1.95
CXXC1Q9P0U4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CXXC1Q9P0U4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CXXC1Q9P0U4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 MIR342-201ENST00000362212 99 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 MIR148B-201ENST00000362252 99 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-34-201ENST00000362441 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-12-201ENST00000362583 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-29-201ENST00000362834 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-9-201ENST00000362912 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-21-201ENST00000362963 81 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-14-201ENST00000363090 81 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-13-201ENST00000363358 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-41-201ENST00000363608 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-11-201ENST00000363616 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-5-201ENST00000363633 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-39-201ENST00000363694 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-4-201ENST00000363810 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-16-201ENST00000363887 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-6-201ENST00000363942 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-42-201ENST00000364273 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-15-201ENST00000364809 81 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-1-201ENST00000364961 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-26-201ENST00000365067 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-10-201ENST00000365073 81 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORA1.2-201ENST00000365189 134 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 Y_RNA.338-201ENST00000365320 114 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-43-201ENST00000365503 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-36-201ENST00000365629 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 MIR136-201ENST00000385207 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 MIR1267-201ENST00000408723 78 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 AC090821.2-201ENST00000523552 176 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 SNORD115-40-201ENST00000606510 82 ntBASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
CXXC1Q9P0U4 MIR302B-201ENST00000362188 73 ntBASIC2.86□□□□□ -1.95
CXXC1Q9P0U4 RNU1-52P-201ENST00000384190 164 ntBASIC2.86□□□□□ -1.95
CXXC1Q9P0U4 SNORA46-201ENST00000384762 135 ntBASIC2.86□□□□□ -1.95
CXXC1Q9P0U4 AL356320.1-201ENST00000429616 163 ntBASIC2.86□□□□□ -1.95
CXXC1Q9P0U4 RNU7-96P-201ENST00000459535 64 ntBASIC2.86□□□□□ -1.95
CXXC1Q9P0U4 AC003982.1-202ENST00000469928 248 ntBASIC2.86□□□□□ -1.95
CXXC1Q9P0U4 RNA5SP282-201ENST00000516355 108 ntBASIC2.86□□□□□ -1.95
CXXC1Q9P0U4 RNY4P20-201ENST00000516678 93 ntBASIC2.86□□□□□ -1.95
CXXC1Q9P0U4 AC021506.2-201ENST00000612354 169 ntBASIC2.86□□□□□ -1.95
CXXC1Q9P0U4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
CXXC1Q9P0U4 AC007336.1-201ENST00000576365 3828 ntBASIC2.85□□□□□ -1.95
CXXC1Q9P0U4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.85□□□□□ -1.95
CXXC1Q9P0U4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CXXC1Q9P0U4 Y_RNA.198-201ENST00000364013 98 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms