Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 SEPT14P17-201ENST00000617978 177 ntBASIC0.78□□□□□ -2.28
EXOSC3Q9NQT5 AC012676.2-201ENST00000619258 186 ntBASIC0.78□□□□□ -2.28
EXOSC3Q9NQT5 AL442644.1-201ENST00000454390 3105 ntBASIC0.78□□□□□ -2.28
EXOSC3Q9NQT5 Y_RNA.276-201ENST00000364732 109 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 Y_RNA.293-201ENST00000364908 93 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-326P-201ENST00000365480 107 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 MIR200A-201ENST00000384875 90 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-351P-201ENST00000516097 100 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-113P-201ENST00000516653 101 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 SCARNA24.2-201ENST00000516968 130 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 MIR5692C2-201ENST00000577959 77 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 AC131055.1-201ENST00000584626 316 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 AL049861.1-201ENST00000603130 150 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 AC006441.5-201ENST00000612680 209 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 AL391516.1-201ENST00000554380 2449 ntBASIC0.77□□□□□ -2.29
EXOSC3Q9NQT5 MIR367-201ENST00000362299 68 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 Y_RNA.84-201ENST00000363011 104 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 Y_RNA.152-201ENST00000363578 100 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-654P-201ENST00000364373 107 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 RNU4-10P-201ENST00000364383 140 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 SNORA33.2-201ENST00000365413 134 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-144P-201ENST00000383951 107 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 MIR146A-201ENST00000385201 99 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 MIR1302-7-201ENST00000408841 72 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 MTCYBP6-201ENST00000441810 138 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-830P-201ENST00000516353 107 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-1007P-201ENST00000516586 107 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 MIR4661-201ENST00000582720 75 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 snoU18.1-201ENST00000629629 71 ntBASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.76□□□□□ -2.29
EXOSC3Q9NQT5 Y_RNA.14-201ENST00000362415 103 ntBASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 SNORD114-27-201ENST00000363766 70 ntBASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 RNA5SP95-201ENST00000410319 137 ntBASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 AC023449.1-201ENST00000454464 154 ntBASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 RNU7-25P-201ENST00000516544 62 ntBASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 SNORA27.4-201ENST00000516650 95 ntBASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 RNU7-149P-201ENST00000516739 59 ntBASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-570P-201ENST00000517051 105 ntBASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 AC012433.1-201ENST00000588916 398 ntBASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 AL008718.3-201ENST00000610217 321 ntBASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 uc_338.4-201ENST00000616635 176 ntBASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 AC022140.2-201ENST00000623500 188 ntBASIC0.75□□□□□ -2.29
EXOSC3Q9NQT5 MIR337-201ENST00000362281 93 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 Y_RNA.217-201ENST00000364214 105 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-985P-201ENST00000410182 104 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 RPS3AP1-201ENST00000413190 320 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 MTND4LP30-201ENST00000454092 297 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 Y_RNA.641-201ENST00000459414 105 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 RNU4-57P-201ENST00000515980 135 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-1143P-201ENST00000516125 104 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 AC109810.1-201ENST00000534066 224 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 MIR4724-201ENST00000579485 89 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-94P-201ENST00000607728 107 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 AL021707.8-201ENST00000609428 183 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 MIR6516-201ENST00000630554 81 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 MIR6767-201ENST00000637302 66 ntBASIC0.74□□□□□ -2.29
EXOSC3Q9NQT5 Y_RNA.370-201ENST00000365589 108 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-639P-201ENST00000384074 107 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 SNORA51.10-201ENST00000384418 136 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 AC113618.1-201ENST00000416747 285 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 POLR2J4-204ENST00000418424 324 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 AL731563.1-201ENST00000442202 214 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 AL392103.1-201ENST00000447000 198 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 SERF1AP1-201ENST00000514575 187 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 Y_RNA.666-201ENST00000516187 112 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-1338P-201ENST00000516328 91 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 RNA5SP102-201ENST00000516865 106 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 DEFB108E-201ENST00000524692 240 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 MIR3973-201ENST00000579824 107 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 MIR548AO-201ENST00000579992 96 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 AC044792.1-201ENST00000593294 196 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 MIR4791-201ENST00000607666 84 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 AC108706.1-201ENST00000611053 297 ntBASIC0.73□□□□□ -2.29
EXOSC3Q9NQT5 MIR373-201ENST00000362273 69 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-1335P-201ENST00000365426 107 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 Y_RNA.512-201ENST00000384518 102 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 Y_RNA.547-201ENST00000384654 119 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 Y_RNA.572-201ENST00000384757 98 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 MIR605-201ENST00000385078 83 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 RNA5SP496-201ENST00000391240 109 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 MIR548O-201ENST00000408583 114 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-1203P-201ENST00000410703 110 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 AC005534.2-201ENST00000431047 433 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 RNA5SP255-201ENST00000516370 107 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 RNU6-197P-201ENST00000516680 100 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 AC036111.3-201ENST00000526389 112 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 AC211469.2-201ENST00000605461 205 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 MTND1P7-201ENST00000632801 297 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 AC023934.1-201ENST00000574529 2389 ntBASIC0.72□□□□□ -2.29
EXOSC3Q9NQT5 Y_RNA.117-201ENST00000363294 101 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms