Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 RNA5SP117-201ENST00000365294 118 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-43-201ENST00000365503 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-36-201ENST00000365629 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 RNU6-708P-201ENST00000384217 107 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 MIR588-201ENST00000384900 83 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 MIR548O-201ENST00000408583 114 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 RNU2-59P-201ENST00000410482 191 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 RNU7-67P-201ENST00000459003 62 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 AC107297.1-201ENST00000459991 176 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 RNU6-264P-201ENST00000517134 104 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 AC005357.1-201ENST00000588399 301 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 SNORD115-40-201ENST00000606510 82 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 U2.1-201ENST00000618978 145 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 Z97988.1-201ENST00000637697 135 ntBASIC-0.08□□□□□ -2.42
VCX3AQ9NNX9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 RNA5SP432-201ENST00000362480 116 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 Y_RNA.27-201ENST00000362540 103 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 SNORD81.1-201ENST00000363064 77 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 SNORA72.1-201ENST00000363485 129 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 RNU4-50P-201ENST00000364361 141 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 RNU6-42P-201ENST00000384165 107 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 SNORD38B-201ENST00000384690 67 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 RNU6-913P-201ENST00000390913 95 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 SNORA36B-201ENST00000410438 131 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 Y_RNA.605-201ENST00000410577 105 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 RNU4-14P-201ENST00000410858 122 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 AC024067.1-201ENST00000426199 223 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 RNU7-73P-201ENST00000458743 63 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 MTND4P17-201ENST00000470444 350 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 AC092989.1-201ENST00000481235 277 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 RNU6-720P-201ENST00000516363 108 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 RNU6-911P-201ENST00000516523 104 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 MIR4290-201ENST00000583807 95 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 MIR4768-201ENST00000585270 74 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 AP000942.4-201ENST00000604811 241 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 SNORD38B-202ENST00000625943 69 ntBASIC-0.09□□□□□ -2.42
VCX3AQ9NNX9 SNORA9.1-201ENST00000362412 131 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 RNU6-890P-201ENST00000384121 107 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 Y_RNA.516-201ENST00000384541 124 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 RNU6-310P-201ENST00000384655 107 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 MIR563-201ENST00000385080 79 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 RNU2-70P-201ENST00000410718 179 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 HMGN1P33-201ENST00000432945 451 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 snoU13.2-201ENST00000459201 104 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 RNU7-141P-201ENST00000459304 62 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 RNA5SP227-201ENST00000516184 113 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 RNA5SP220-201ENST00000516298 104 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 MIR3145-201ENST00000580727 82 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 AC022306.2-201ENST00000617563 647 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 MIR6755-201ENST00000619993 66 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 AC138305.3-201ENST00000624988 240 ntBASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.1□□□□□ -2.43
VCX3AQ9NNX9 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 SNORD114-23-201ENST00000363536 72 ntBASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 MT-TF-201ENST00000387314 71 ntBASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 SNORA26.5-201ENST00000391215 123 ntBASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 MIR1277-201ENST00000408536 78 ntBASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 RNU6-370P-201ENST00000411008 104 ntBASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 FCF1P9-201ENST00000412546 282 ntBASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 RNU6-958P-201ENST00000516995 106 ntBASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 MIR8055-201ENST00000610739 97 ntBASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 MIR7107-201ENST00000611489 80 ntBASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-0.11□□□□□ -2.43
VCX3AQ9NNX9 MIR30D-201ENST00000362283 70 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 RNU4-67P-201ENST00000364569 141 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 SNORA72.4-201ENST00000384174 132 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 PCNPP3-201ENST00000393579 471 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 RNU2-14P-201ENST00000411053 191 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 RNU6-602P-201ENST00000411155 105 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 AL512326.2-201ENST00000426359 151 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 MTCO1P5-201ENST00000433573 344 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 SNORA62.5-201ENST00000516634 120 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 RNA5SP268-201ENST00000516828 124 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 AC006600.1-201ENST00000572529 153 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-0.12□□□□□ -2.43
VCX3AQ9NNX9 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 SNORA1.1-201ENST00000364671 133 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 Y_RNA.462-201ENST00000384268 102 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 MIR548F1-201ENST00000408667 84 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 AC069271.1-201ENST00000445577 156 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 Z83846.1-201ENST00000446798 265 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 RNU6-469P-201ENST00000516253 101 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 RNU7-53P-201ENST00000516705 60 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 RNU7-30P-201ENST00000516835 62 ntBASIC-0.13□□□□□ -2.43
VCX3AQ9NNX9 AC007751.1-201ENST00000529260 376 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms