Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 MTCO2P33-201ENST00000402100 465 ntBASIC0.84□□□□□ -2.27
NXF3Q9H4D5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.84□□□□□ -2.27
NXF3Q9H4D5 POLR2J4-204ENST00000418424 324 ntBASIC0.84□□□□□ -2.27
NXF3Q9H4D5 AC245047.7-201ENST00000440265 293 ntBASIC0.84□□□□□ -2.27
NXF3Q9H4D5 snoU13.25-201ENST00000458945 104 ntBASIC0.84□□□□□ -2.27
NXF3Q9H4D5 NDUFA4P2-201ENST00000489989 244 ntBASIC0.84□□□□□ -2.27
NXF3Q9H4D5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.84□□□□□ -2.27
NXF3Q9H4D5 RNA5SP436-201ENST00000516020 115 ntBASIC0.84□□□□□ -2.27
NXF3Q9H4D5 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
NXF3Q9H4D5 AC037487.3-201ENST00000606668 112 ntBASIC0.84□□□□□ -2.27
NXF3Q9H4D5 MIR6515-201ENST00000619843 57 ntBASIC0.84□□□□□ -2.27
NXF3Q9H4D5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
NXF3Q9H4D5 UBE2WP1-201ENST00000362030 340 ntBASIC0.83□□□□□ -2.28
NXF3Q9H4D5 SNORA25.1-201ENST00000362326 128 ntBASIC0.83□□□□□ -2.28
NXF3Q9H4D5 Y_RNA.84-201ENST00000363011 104 ntBASIC0.83□□□□□ -2.28
NXF3Q9H4D5 MIR15B-201ENST00000385045 98 ntBASIC0.83□□□□□ -2.28
NXF3Q9H4D5 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.83□□□□□ -2.28
NXF3Q9H4D5 SNORD11-201ENST00000459124 84 ntBASIC0.83□□□□□ -2.28
NXF3Q9H4D5 MTATP8P1-201ENST00000467115 207 ntBASIC0.83□□□□□ -2.28
NXF3Q9H4D5 AC048334.1-201ENST00000477975 159 ntBASIC0.83□□□□□ -2.28
NXF3Q9H4D5 SNORA31.2-201ENST00000516019 134 ntBASIC0.83□□□□□ -2.28
NXF3Q9H4D5 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
NXF3Q9H4D5 AP003072.1-201ENST00000531740 145 ntBASIC0.83□□□□□ -2.28
NXF3Q9H4D5 AC013791.1-201ENST00000616619 62 ntBASIC0.83□□□□□ -2.28
NXF3Q9H4D5 RNU6-1272P-201ENST00000362776 107 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 SNORD14E-201ENST00000364009 85 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 Y_RNA.217-201ENST00000364214 105 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 Y_RNA.326-201ENST00000365176 113 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 RNU6-514P-201ENST00000384208 107 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 RNU6-662P-201ENST00000384253 104 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 RNU6-1109P-201ENST00000391187 107 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 SNRPGP14-201ENST00000435400 219 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.82□□□□□ -2.28
NXF3Q9H4D5 Y_RNA.641-201ENST00000459414 105 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 AC091959.1-201ENST00000495857 238 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 RNU6-1007P-201ENST00000516586 107 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 SNORA27.4-201ENST00000516650 95 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 SNORA74.3-201ENST00000517108 154 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 AL442663.2-201ENST00000554385 511 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 RPL23AP91-201ENST00000569211 455 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 MIR5692C2-201ENST00000577959 77 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 AC008507.4-201ENST00000585464 127 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 AL020996.3-201ENST00000606617 222 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 AL096861.1-201ENST00000610899 123 ntBASIC0.82□□□□□ -2.28
NXF3Q9H4D5 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
NXF3Q9H4D5 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
NXF3Q9H4D5 RNU6-1205P-201ENST00000363625 106 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 Y_RNA.242-201ENST00000364473 110 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 RNU1-36P-201ENST00000365130 165 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 Y_RNA.363-201ENST00000365529 113 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 RNU6-442P-201ENST00000383968 104 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 RNU6-1203P-201ENST00000410703 110 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 SERF1AP1-201ENST00000514575 187 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 RNU6-1338P-201ENST00000516328 91 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 RNU6-830P-201ENST00000516353 107 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 SNORD111.1-201ENST00000516421 86 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 RNU6-570P-201ENST00000517051 105 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 MIR3192-201ENST00000584920 77 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 PRELID3BP2-201ENST00000605362 201 ntBASIC0.81□□□□□ -2.28
NXF3Q9H4D5 RNU6-1160P-201ENST00000384546 104 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 MIR200A-201ENST00000384875 90 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 RNU6-910P-201ENST00000390844 107 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 RNU6-383P-201ENST00000410864 94 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 AC063976.4-201ENST00000421971 163 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 BTF3P11-201ENST00000426582 477 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 SNORD79.1-201ENST00000516069 84 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 RNU7-43P-201ENST00000516554 64 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 SCARNA24.2-201ENST00000516968 130 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 AC006504.6-201ENST00000590142 199 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 AL021707.8-201ENST00000609428 183 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 AL391903.3-201ENST00000612158 163 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
NXF3Q9H4D5 SNORA63-201ENST00000363450 132 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 RNU6-268P-201ENST00000364174 107 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 RNU4-10P-201ENST00000364383 140 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 SNORD38C-201ENST00000384381 69 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 MIR508-201ENST00000384857 115 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 MIR520C-201ENST00000385005 87 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 SNORD72-201ENST00000390994 80 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 RNA5SP496-201ENST00000391240 109 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 AL603910.2-201ENST00000407268 136 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 AC245047.8-201ENST00000456455 284 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 SNORD123-201ENST00000459473 70 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 SNORA18.7-201ENST00000516910 131 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 Y_RNA.720-201ENST00000517166 92 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.79□□□□□ -2.28
NXF3Q9H4D5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.79□□□□□ -2.28
NXF3Q9H4D5 MIR5688-201ENST00000580619 83 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 MIR4764-201ENST00000580680 88 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 Y_RNA.812-201ENST00000610788 101 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 AC006441.5-201ENST00000612680 209 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 Y_RNA.784-201ENST00000613803 101 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 Y_RNA.787-201ENST00000616522 101 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 Y_RNA.780-201ENST00000617336 101 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 Y_RNA.801-201ENST00000619005 101 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.79□□□□□ -2.28
NXF3Q9H4D5 MIR6866-201ENST00000638146 69 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms