Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 AC015726.2-201ENST00000620112 122 ntBASIC0.96□□□□□ -2.26
UBQLN3Q9H347 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
UBQLN3Q9H347 MIR367-201ENST00000362299 68 ntBASIC0.95□□□□□ -2.26
UBQLN3Q9H347 RNU6-694P-201ENST00000364071 147 ntBASIC0.95□□□□□ -2.26
UBQLN3Q9H347 SNORD28B-201ENST00000390993 75 ntBASIC0.95□□□□□ -2.26
UBQLN3Q9H347 AC113618.1-201ENST00000416747 285 ntBASIC0.95□□□□□ -2.26
UBQLN3Q9H347 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.95□□□□□ -2.26
UBQLN3Q9H347 MTND5P22-201ENST00000458380 195 ntBASIC0.95□□□□□ -2.26
UBQLN3Q9H347 RNU7-90P-201ENST00000459216 62 ntBASIC0.95□□□□□ -2.26
UBQLN3Q9H347 SNORD124-201ENST00000459577 104 ntBASIC0.95□□□□□ -2.26
UBQLN3Q9H347 AC136443.5-201ENST00000603741 370 ntBASIC0.95□□□□□ -2.26
UBQLN3Q9H347 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
UBQLN3Q9H347 MIR6767-201ENST00000637302 66 ntBASIC0.95□□□□□ -2.26
UBQLN3Q9H347 Y_RNA.84-201ENST00000363011 104 ntBASIC0.94□□□□□ -2.26
UBQLN3Q9H347 RNA5SP48-201ENST00000363969 126 ntBASIC0.94□□□□□ -2.26
UBQLN3Q9H347 Y_RNA.242-201ENST00000364473 110 ntBASIC0.94□□□□□ -2.26
UBQLN3Q9H347 MIR570-201ENST00000384917 97 ntBASIC0.94□□□□□ -2.26
UBQLN3Q9H347 AL603910.2-201ENST00000407268 136 ntBASIC0.94□□□□□ -2.26
UBQLN3Q9H347 SNRPGP14-201ENST00000435400 219 ntBASIC0.94□□□□□ -2.26
UBQLN3Q9H347 AL731563.1-201ENST00000442202 214 ntBASIC0.94□□□□□ -2.26
UBQLN3Q9H347 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.94□□□□□ -2.26
UBQLN3Q9H347 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.94□□□□□ -2.26
UBQLN3Q9H347 SNORA27.4-201ENST00000516650 95 ntBASIC0.94□□□□□ -2.26
UBQLN3Q9H347 RNU6-570P-201ENST00000517051 105 ntBASIC0.94□□□□□ -2.26
UBQLN3Q9H347 MIR4724-201ENST00000579485 89 ntBASIC0.94□□□□□ -2.26
UBQLN3Q9H347 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
UBQLN3Q9H347 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.94□□□□□ -2.26
UBQLN3Q9H347 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.93□□□□□ -2.26
UBQLN3Q9H347 RNU1-93P-201ENST00000364704 169 ntBASIC0.93□□□□□ -2.26
UBQLN3Q9H347 SNORD114-24-201ENST00000365029 72 ntBASIC0.93□□□□□ -2.26
UBQLN3Q9H347 Y_RNA.326-201ENST00000365176 113 ntBASIC0.93□□□□□ -2.26
UBQLN3Q9H347 U8.17-201ENST00000391292 132 ntBASIC0.93□□□□□ -2.26
UBQLN3Q9H347 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.93□□□□□ -2.26
UBQLN3Q9H347 RN7SKP164-201ENST00000516138 266 ntBASIC0.93□□□□□ -2.26
UBQLN3Q9H347 RNU7-181P-201ENST00000517234 74 ntBASIC0.93□□□□□ -2.26
UBQLN3Q9H347 AL049861.1-201ENST00000603130 150 ntBASIC0.93□□□□□ -2.26
UBQLN3Q9H347 AC008133.2-201ENST00000624540 351 ntBASIC0.93□□□□□ -2.26
UBQLN3Q9H347 snoU18.1-201ENST00000629629 71 ntBASIC0.93□□□□□ -2.26
UBQLN3Q9H347 MIR4251-201ENST00000635819 61 ntBASIC0.93□□□□□ -2.26
UBQLN3Q9H347 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.93□□□□□ -2.26
UBQLN3Q9H347 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
UBQLN3Q9H347 RNU6-1067P-201ENST00000384752 107 ntBASIC0.92□□□□□ -2.26
UBQLN3Q9H347 MIR200A-201ENST00000384875 90 ntBASIC0.92□□□□□ -2.26
UBQLN3Q9H347 MIR942-201ENST00000401111 86 ntBASIC0.92□□□□□ -2.26
UBQLN3Q9H347 MIR1185-1-201ENST00000408598 86 ntBASIC0.92□□□□□ -2.26
UBQLN3Q9H347 POLR2J4-204ENST00000418424 324 ntBASIC0.92□□□□□ -2.26
UBQLN3Q9H347 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.92□□□□□ -2.26
UBQLN3Q9H347 RNU6-830P-201ENST00000516353 107 ntBASIC0.92□□□□□ -2.26
UBQLN3Q9H347 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
UBQLN3Q9H347 SNORD114-27-201ENST00000363766 70 ntBASIC0.91□□□□□ -2.26
UBQLN3Q9H347 SERF1AP1-201ENST00000514575 187 ntBASIC0.91□□□□□ -2.26
UBQLN3Q9H347 RNU6-1338P-201ENST00000516328 91 ntBASIC0.91□□□□□ -2.26
UBQLN3Q9H347 RNU7-149P-201ENST00000516739 59 ntBASIC0.91□□□□□ -2.26
UBQLN3Q9H347 DEFB108E-201ENST00000524692 240 ntBASIC0.91□□□□□ -2.26
UBQLN3Q9H347 AC023827.1-201ENST00000569247 97 ntBASIC0.91□□□□□ -2.26
UBQLN3Q9H347 AC006441.5-201ENST00000612680 209 ntBASIC0.91□□□□□ -2.26
UBQLN3Q9H347 uc_338.4-201ENST00000616635 176 ntBASIC0.91□□□□□ -2.26
UBQLN3Q9H347 SEPT14P17-201ENST00000617978 177 ntBASIC0.91□□□□□ -2.26
UBQLN3Q9H347 AC068700.1-201ENST00000565862 3754 ntBASIC0.91□□□□□ -2.26
UBQLN3Q9H347 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.217-201ENST00000364214 105 ntBASIC0.9□□□□□ -2.27
UBQLN3Q9H347 SNORD114-22-201ENST00000365423 72 ntBASIC0.9□□□□□ -2.27
UBQLN3Q9H347 RNU6-713P-201ENST00000384761 107 ntBASIC0.9□□□□□ -2.27
UBQLN3Q9H347 RNA5SP496-201ENST00000391240 109 ntBASIC0.9□□□□□ -2.27
UBQLN3Q9H347 RNU6-1203P-201ENST00000410703 110 ntBASIC0.9□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.641-201ENST00000459414 105 ntBASIC0.9□□□□□ -2.27
UBQLN3Q9H347 MTATP8P1-201ENST00000467115 207 ntBASIC0.9□□□□□ -2.27
UBQLN3Q9H347 PDCD5P2-201ENST00000507570 312 ntBASIC0.9□□□□□ -2.27
UBQLN3Q9H347 AP003716.2-201ENST00000528260 108 ntBASIC0.9□□□□□ -2.27
UBQLN3Q9H347 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.9□□□□□ -2.27
UBQLN3Q9H347 AC006006.1-201ENST00000603082 144 ntBASIC0.9□□□□□ -2.27
UBQLN3Q9H347 AL008718.3-201ENST00000610217 321 ntBASIC0.9□□□□□ -2.27
UBQLN3Q9H347 SNORA63-201ENST00000363450 132 ntBASIC0.89□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.191-201ENST00000363972 113 ntBASIC0.89□□□□□ -2.27
UBQLN3Q9H347 RNU4-10P-201ENST00000364383 140 ntBASIC0.89□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.422-201ENST00000384054 114 ntBASIC0.89□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.512-201ENST00000384518 102 ntBASIC0.89□□□□□ -2.27
UBQLN3Q9H347 RNU6-1160P-201ENST00000384546 104 ntBASIC0.89□□□□□ -2.27
UBQLN3Q9H347 RNU6-1011P-201ENST00000384668 107 ntBASIC0.89□□□□□ -2.27
UBQLN3Q9H347 MIR606-201ENST00000384851 96 ntBASIC0.89□□□□□ -2.27
UBQLN3Q9H347 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.89□□□□□ -2.27
UBQLN3Q9H347 AC006504.6-201ENST00000590142 199 ntBASIC0.89□□□□□ -2.27
UBQLN3Q9H347 SNORA63C-201ENST00000364578 129 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 SNORA1.2-201ENST00000365189 134 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.370-201ENST00000365589 108 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 SNORA51.10-201ENST00000384418 136 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 RNU6-1289P-201ENST00000384431 106 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 RNU6-1109P-201ENST00000391187 107 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.88□□□□□ -2.27
UBQLN3Q9H347 TRBVB-201ENST00000477100 408 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.88□□□□□ -2.27
UBQLN3Q9H347 RNU7-25P-201ENST00000516544 62 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 RNU6-635P-201ENST00000516651 102 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 RNU6-113P-201ENST00000516653 101 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 MIR4452-201ENST00000583004 71 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 AC131055.1-201ENST00000584626 316 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
UBQLN3Q9H347 Y_RNA.812-201ENST00000610788 101 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 555.4 ms