Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 IGKV3-31-201ENST00000523109 329 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 AC141557.1-201ENST00000540982 400 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS11Q9H270 AL033523.1-201ENST00000605153 153 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 U4.3-201ENST00000621047 82 ntBASIC2.43□□□□□ -2.02
VPS11Q9H270 RNU6-228P-201ENST00000362700 106 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 RNY4P6-201ENST00000363667 96 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 Y_RNA.219-201ENST00000364232 113 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 MIR27B-201ENST00000385129 97 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 RNA5SP225-201ENST00000410874 135 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 SNRPGP10-201ENST00000432323 225 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 HMGN1P7-201ENST00000491722 313 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 RNA5SP395-201ENST00000516567 118 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 AC026421.1-201ENST00000519101 163 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 AC022523.2-201ENST00000561045 150 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 AC007229.1-201ENST00000590455 412 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 AC073413.2-201ENST00000604332 360 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 AC067747.1-201ENST00000608026 250 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 MIR6840-201ENST00000611937 71 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 AC025521.1-201ENST00000621624 286 ntBASIC2.42□□□□□ -2.02
VPS11Q9H270 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
VPS11Q9H270 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS11Q9H270 MIR302B-201ENST00000362188 73 ntBASIC2.41□□□□□ -2.02
VPS11Q9H270 RNA5SP450-201ENST00000411206 102 ntBASIC2.41□□□□□ -2.02
VPS11Q9H270 HMGN2P3-201ENST00000433603 273 ntBASIC2.41□□□□□ -2.02
VPS11Q9H270 HMGN2P5-201ENST00000436882 273 ntBASIC2.41□□□□□ -2.02
VPS11Q9H270 SNRPGP13-201ENST00000442212 177 ntBASIC2.41□□□□□ -2.02
VPS11Q9H270 AC107297.1-201ENST00000459991 176 ntBASIC2.41□□□□□ -2.02
VPS11Q9H270 RNA5SP320-201ENST00000516263 124 ntBASIC2.41□□□□□ -2.02
VPS11Q9H270 AC084364.2-201ENST00000546924 395 ntBASIC2.41□□□□□ -2.02
VPS11Q9H270 GTF3AP2-201ENST00000557014 266 ntBASIC2.41□□□□□ -2.02
VPS11Q9H270 U2.20-201ENST00000613956 192 ntBASIC2.41□□□□□ -2.02
VPS11Q9H270 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
VPS11Q9H270 AC131280.1-202ENST00000624067 4211 ntBASIC2.41□□□□□ -2.02
VPS11Q9H270 Y_RNA.107-201ENST00000363190 121 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 RNU1-96P-201ENST00000364163 162 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 Y_RNA.298-201ENST00000364960 107 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
VPS11Q9H270 Y_RNA.621-201ENST00000411065 96 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 AL353689.1-201ENST00000438895 199 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 PGBD4P5-201ENST00000445958 426 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 AC109327.2-201ENST00000448339 378 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.4□□□□□ -2.03
VPS11Q9H270 RNU6-893P-201ENST00000458841 100 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 RN7SL636P-201ENST00000497504 294 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 RNU6-1291P-201ENST00000516591 104 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 AC005786.1-201ENST00000588553 154 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 AC006023.1-201ENST00000603944 259 ntBASIC2.4□□□□□ -2.03
VPS11Q9H270 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VPS11Q9H270 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS11Q9H270 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS11Q9H270 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
VPS11Q9H270 Y_RNA.93-201ENST00000363066 109 ntBASIC2.39□□□□□ -2.03
VPS11Q9H270 Y_RNA.213-201ENST00000364178 111 ntBASIC2.39□□□□□ -2.03
VPS11Q9H270 MIR548D2-201ENST00000384955 97 ntBASIC2.39□□□□□ -2.03
VPS11Q9H270 MIR597-201ENST00000384968 97 ntBASIC2.39□□□□□ -2.03
VPS11Q9H270 MIR520G-201ENST00000385064 90 ntBASIC2.39□□□□□ -2.03
VPS11Q9H270 RNU6-972P-201ENST00000391208 107 ntBASIC2.39□□□□□ -2.03
VPS11Q9H270 AC060773.1-201ENST00000421698 310 ntBASIC2.39□□□□□ -2.03
VPS11Q9H270 SUMO2P16-201ENST00000519475 264 ntBASIC2.39□□□□□ -2.03
VPS11Q9H270 AL590808.1-201ENST00000618696 141 ntBASIC2.39□□□□□ -2.03
VPS11Q9H270 ZNF720P1-201ENST00000562403 1939 ntBASIC2.38□□□□□ -2.03
VPS11Q9H270 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS11Q9H270 SNORD114-30-201ENST00000364448 72 ntBASIC2.38□□□□□ -2.03
VPS11Q9H270 RNU6-1134P-201ENST00000365156 101 ntBASIC2.38□□□□□ -2.03
VPS11Q9H270 RNU6-690P-201ENST00000365242 106 ntBASIC2.38□□□□□ -2.03
VPS11Q9H270 RPS29P21-201ENST00000496272 170 ntBASIC2.38□□□□□ -2.03
VPS11Q9H270 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.38□□□□□ -2.03
VPS11Q9H270 RNU7-123P-201ENST00000515911 60 ntBASIC2.38□□□□□ -2.03
VPS11Q9H270 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.38□□□□□ -2.03
VPS11Q9H270 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS11Q9H270 AC002984.1-201ENST00000591692 448 ntBASIC2.38□□□□□ -2.03
VPS11Q9H270 FAM71BP1-201ENST00000604431 523 ntBASIC2.38□□□□□ -2.03
VPS11Q9H270 MIR2052-201ENST00000636055 55 ntBASIC2.38□□□□□ -2.03
VPS11Q9H270 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS11Q9H270 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS11Q9H270 AC016717.2-201ENST00000609089 5141 ntBASIC2.37□□□□□ -2.03
VPS11Q9H270 Y_RNA.17-201ENST00000362433 111 ntBASIC2.37□□□□□ -2.03
VPS11Q9H270 Y_RNA.290-201ENST00000364879 114 ntBASIC2.37□□□□□ -2.03
VPS11Q9H270 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.37□□□□□ -2.03
VPS11Q9H270 HMGN2P34-201ENST00000437647 269 ntBASIC2.37□□□□□ -2.03
VPS11Q9H270 ATP5J2P3-201ENST00000451550 258 ntBASIC2.37□□□□□ -2.03
VPS11Q9H270 RNU6-1146P-201ENST00000516282 102 ntBASIC2.37□□□□□ -2.03
VPS11Q9H270 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VPS11Q9H270 AC021443.1-201ENST00000604478 211 ntBASIC2.37□□□□□ -2.03
VPS11Q9H270 AC015726.2-201ENST00000620112 122 ntBASIC2.37□□□□□ -2.03
VPS11Q9H270 U1.36-201ENST00000620684 176 ntBASIC2.37□□□□□ -2.03
VPS11Q9H270 U6.108-201ENST00000637764 58 ntBASIC2.37□□□□□ -2.03
VPS11Q9H270 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS11Q9H270 AL596028.1-201ENST00000326971 197 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 MIRLET7G-201ENST00000362280 84 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 SNORA16B-201ENST00000364674 135 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 SNORA2.2-201ENST00000365473 135 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 RNU6-1124P-201ENST00000384169 107 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 MIR196B-201ENST00000384852 84 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 RNU6-1186P-201ENST00000410429 97 ntBASIC2.36□□□□□ -2.03
VPS11Q9H270 RNU6-938P-201ENST00000411285 103 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms