Protein–RNA interactions for Protein: Q9GZU3

TMEM39B, Transmembrane protein 39B, humanhuman

Predictions only

Length 492 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39BQ9GZU3 AL162730.1-201ENST00000605734 292 ntBASIC1.38□□□□□ -2.19
TMEM39BQ9GZU3 SNORD14E-201ENST00000364009 85 ntBASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 SNORA2.2-201ENST00000365473 135 ntBASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 MIR802-201ENST00000390235 94 ntBASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 SNORD72-201ENST00000390994 80 ntBASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 SNORD11-201ENST00000459124 84 ntBASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 AL512310.8-201ENST00000550183 120 ntBASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 AC090049.2-201ENST00000550377 109 ntBASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 CYP3A52P-201ENST00000563326 91 ntBASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 MIR4295-201ENST00000585286 85 ntBASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 AL513534.2-201ENST00000603836 250 ntBASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.802-201ENST00000614892 130 ntBASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 U4.1-201ENST00000620349 87 ntBASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
TMEM39BQ9GZU3 SNORD27-201ENST00000363981 72 ntBASIC1.36□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.352-201ENST00000365439 102 ntBASIC1.36□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.354-201ENST00000365448 111 ntBASIC1.36□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.518-201ENST00000384552 113 ntBASIC1.36□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.556-201ENST00000384677 113 ntBASIC1.36□□□□□ -2.19
TMEM39BQ9GZU3 MIR222-201ENST00000384992 110 ntBASIC1.36□□□□□ -2.19
TMEM39BQ9GZU3 MIR653-201ENST00000385279 96 ntBASIC1.36□□□□□ -2.19
TMEM39BQ9GZU3 AL451046.2-201ENST00000403074 277 ntBASIC1.36□□□□□ -2.19
TMEM39BQ9GZU3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.36□□□□□ -2.19
TMEM39BQ9GZU3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.36□□□□□ -2.19
TMEM39BQ9GZU3 MIR3664-201ENST00000579074 99 ntBASIC1.36□□□□□ -2.19
TMEM39BQ9GZU3 MIR452-201ENST00000385020 85 ntBASIC1.35□□□□□ -2.19
TMEM39BQ9GZU3 AC015922.2-201ENST00000435593 184 ntBASIC1.35□□□□□ -2.19
TMEM39BQ9GZU3 AC087343.1-201ENST00000477341 475 ntBASIC1.35□□□□□ -2.19
TMEM39BQ9GZU3 RNU6-322P-201ENST00000516010 103 ntBASIC1.35□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.668-201ENST00000516233 93 ntBASIC1.35□□□□□ -2.19
TMEM39BQ9GZU3 AC090142.3-201ENST00000519012 385 ntBASIC1.35□□□□□ -2.19
TMEM39BQ9GZU3 AC090821.2-201ENST00000523552 176 ntBASIC1.35□□□□□ -2.19
TMEM39BQ9GZU3 MIR6788-201ENST00000618842 66 ntBASIC1.35□□□□□ -2.19
TMEM39BQ9GZU3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
TMEM39BQ9GZU3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.65-201ENST00000362846 100 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.76-201ENST00000362931 109 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.82-201ENST00000363000 102 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.92-201ENST00000363043 102 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.235-201ENST00000364412 102 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.306-201ENST00000365015 102 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.312-201ENST00000365089 102 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.322-201ENST00000365151 102 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.416-201ENST00000384014 113 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 SNORA8.3-201ENST00000384679 139 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 MIR7-2-201ENST00000384970 110 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 SNORD41-201ENST00000386967 70 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 MIR548J-201ENST00000408833 112 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 AC023449.1-201ENST00000454464 154 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.650-201ENST00000459002 102 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 SNORD116-28-201ENST00000516123 91 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.777-201ENST00000516982 102 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 MIR3149-201ENST00000584629 83 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 AC008507.4-201ENST00000585464 127 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.771-201ENST00000598668 102 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 AC062037.2-201ENST00000610137 73 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 MIR6515-201ENST00000619843 57 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 7SK.10-201ENST00000621414 298 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 Y_RNA.789-201ENST00000622480 102 ntBASIC1.34□□□□□ -2.19
TMEM39BQ9GZU3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
TMEM39BQ9GZU3 Y_RNA.144-201ENST00000363521 113 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 Y_RNA.193-201ENST00000363979 102 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 RNU6-702P-201ENST00000364982 107 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 RNU6-463P-201ENST00000384340 107 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 MIR626-201ENST00000385032 94 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 Y_RNA.587-201ENST00000391210 103 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 HMGN2P32-201ENST00000444648 269 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 SNORD2.1-201ENST00000458762 69 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 MTND1P19-201ENST00000511780 315 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 Y_RNA.680-201ENST00000516441 93 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 RN7SKP88-201ENST00000516847 250 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 MIR3128-201ENST00000581957 66 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 MIR151B-201ENST00000584249 96 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 7SK.8-201ENST00000612110 250 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 7SK.11-201ENST00000615477 250 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 uc_338.4-201ENST00000616635 176 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 AL365265.1-201ENST00000621045 234 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 7SK.13-201ENST00000622040 250 ntBASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TMEM39BQ9GZU3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 Y_RNA.336-201ENST00000365307 109 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 RNU6-442P-201ENST00000383968 104 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 Y_RNA.562-201ENST00000384695 113 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 MIR136-201ENST00000385207 82 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 MIR526A2-201ENST00000390198 65 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 RNA5SP496-201ENST00000391240 109 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 MIR548H3-201ENST00000408771 118 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 RNU7-149P-201ENST00000516739 59 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 SNORA18.7-201ENST00000516910 131 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 RNU6-165P-201ENST00000517170 99 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 MIR4282-201ENST00000583613 67 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 AC087685.1-201ENST00000587507 141 ntBASIC1.32□□□□□ -2.2
TMEM39BQ9GZU3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms