Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 AC055731.1-201ENST00000474387 401 ntBASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 Y_RNA.666-201ENST00000516187 112 ntBASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 SNORA25.12-201ENST00000516202 82 ntBASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-426P-201ENST00000516464 97 ntBASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 RNA5SP437-201ENST00000517249 129 ntBASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 MIR6132-201ENST00000622083 109 ntBASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
AMBRA1Q9C0C7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
AMBRA1Q9C0C7 MIRLET7C-201ENST00000362160 84 ntBASIC1.95□□□□□ -2.1
AMBRA1Q9C0C7 SNORD61-201ENST00000384252 73 ntBASIC1.95□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-163P-201ENST00000384396 106 ntBASIC1.95□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.95□□□□□ -2.1
AMBRA1Q9C0C7 RNA5SP272-201ENST00000516095 111 ntBASIC1.95□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-1116P-201ENST00000517269 99 ntBASIC1.95□□□□□ -2.1
AMBRA1Q9C0C7 MIR3935-201ENST00000583472 104 ntBASIC1.95□□□□□ -2.1
AMBRA1Q9C0C7 AC002984.1-201ENST00000591692 448 ntBASIC1.95□□□□□ -2.1
AMBRA1Q9C0C7 AC006441.5-201ENST00000612680 209 ntBASIC1.95□□□□□ -2.1
AMBRA1Q9C0C7 MIR7111-201ENST00000619751 72 ntBASIC1.95□□□□□ -2.1
AMBRA1Q9C0C7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.94□□□□□ -2.1
AMBRA1Q9C0C7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.94□□□□□ -2.1
AMBRA1Q9C0C7 SNORD24-201ENST00000383884 75 ntBASIC1.94□□□□□ -2.1
AMBRA1Q9C0C7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.94□□□□□ -2.1
AMBRA1Q9C0C7 RNU7-197P-201ENST00000458836 62 ntBASIC1.94□□□□□ -2.1
AMBRA1Q9C0C7 AC092991.1-201ENST00000477176 376 ntBASIC1.94□□□□□ -2.1
AMBRA1Q9C0C7 AC114811.1-201ENST00000507207 168 ntBASIC1.94□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-693P-201ENST00000516134 107 ntBASIC1.94□□□□□ -2.1
AMBRA1Q9C0C7 RNA5SP168-201ENST00000516642 112 ntBASIC1.94□□□□□ -2.1
AMBRA1Q9C0C7 AC027279.3-201ENST00000625055 122 ntBASIC1.94□□□□□ -2.1
AMBRA1Q9C0C7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.94□□□□□ -2.1
AMBRA1Q9C0C7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.94□□□□□ -2.1
AMBRA1Q9C0C7 ICE2P2-201ENST00000483823 2787 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 AC010332.2-201ENST00000613083 1904 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 MIR337-201ENST00000362281 93 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-888P-201ENST00000363010 101 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-268P-201ENST00000364174 107 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-81P-201ENST00000365608 104 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-1336P-201ENST00000383886 109 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-360P-201ENST00000390944 104 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 U8.16-201ENST00000391279 133 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 MIR1287-201ENST00000408492 90 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 CALM2P4-201ENST00000430810 426 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 SNRPGP14-201ENST00000435400 219 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 SNRPGP13-201ENST00000442212 177 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 HMGN2P23-201ENST00000456759 269 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 snoU13.27-201ENST00000459278 104 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 CYCTP-201ENST00000504253 315 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 AC090142.3-201ENST00000519012 385 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 MIR4709-201ENST00000577272 72 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 AC091895.1-201ENST00000624494 256 ntBASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.93□□□□□ -2.1
AMBRA1Q9C0C7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 Y_RNA.251-201ENST00000364551 99 ntBASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 RNA5SP212-201ENST00000391223 107 ntBASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 AL606753.1-201ENST00000427435 87 ntBASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 HMGN2P32-201ENST00000444648 269 ntBASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 RNU7-12P-201ENST00000516030 62 ntBASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 AP000942.3-201ENST00000603702 160 ntBASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 U2.22-201ENST00000636441 106 ntBASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.92□□□□□ -2.1
AMBRA1Q9C0C7 AC008555.8-201ENST00000623602 2168 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 RNA5SP276-201ENST00000362580 94 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-833P-201ENST00000363486 107 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 RNY1P11-201ENST00000363759 113 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 SNORA1-201ENST00000384107 130 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-424P-201ENST00000384367 105 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 Y_RNA.542-201ENST00000384641 111 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 SNORA20-201ENST00000384662 132 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 SNORA19-201ENST00000384737 128 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 SNORA40-201ENST00000388090 126 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 Y_RNA.584-201ENST00000391090 114 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 Y_RNA.586-201ENST00000391146 98 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-257P-201ENST00000410238 98 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 RNA5SP57-201ENST00000459463 123 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 RPS27P21-201ENST00000486977 252 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 SNORA18.4-201ENST00000516440 124 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 SNORA31.17-201ENST00000516953 127 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 RNU6-1270P-201ENST00000517128 108 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 AC007751.1-201ENST00000529260 376 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 AL365205.2-201ENST00000594586 68 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 uc_338.20-201ENST00000621563 178 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 WWP1P1-201ENST00000466609 2769 ntBASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
AMBRA1Q9C0C7 ZNF355P-201ENST00000427301 3216 ntBASIC1.9□□□□□ -2.11
AMBRA1Q9C0C7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
AMBRA1Q9C0C7 RNU6-1292P-201ENST00000383856 107 ntBASIC1.9□□□□□ -2.11
AMBRA1Q9C0C7 MIR891A-201ENST00000401237 79 ntBASIC1.9□□□□□ -2.11
AMBRA1Q9C0C7 RNU7-34P-201ENST00000459394 64 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms