Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 RPS29P12-201ENST00000460178 152 ntBASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 RN7SL499P-201ENST00000481141 276 ntBASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 AP002004.2-201ENST00000531656 154 ntBASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 MIR219B-201ENST00000637023 88 ntBASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.88□□□□□ -1.95
CNTNAP4Q9C0A0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CNTNAP4Q9C0A0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.342-201ENST00000365352 113 ntBASIC2.87□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.410-201ENST00000383992 113 ntBASIC2.87□□□□□ -1.95
CNTNAP4Q9C0A0 MT-TI-201ENST00000387365 69 ntBASIC2.87□□□□□ -1.95
CNTNAP4Q9C0A0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CNTNAP4Q9C0A0 COX6CP6-201ENST00000490840 228 ntBASIC2.87□□□□□ -1.95
CNTNAP4Q9C0A0 RNU6-1053P-201ENST00000515930 101 ntBASIC2.87□□□□□ -1.95
CNTNAP4Q9C0A0 RNU6-693P-201ENST00000516134 107 ntBASIC2.87□□□□□ -1.95
CNTNAP4Q9C0A0 RNU6-158P-201ENST00000517104 100 ntBASIC2.87□□□□□ -1.95
CNTNAP4Q9C0A0 SNORD115-40-201ENST00000606510 82 ntBASIC2.87□□□□□ -1.95
CNTNAP4Q9C0A0 MIR6766-201ENST00000622641 72 ntBASIC2.87□□□□□ -1.95
CNTNAP4Q9C0A0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.107-201ENST00000363190 121 ntBASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.221-201ENST00000364248 96 ntBASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.362-201ENST00000365518 110 ntBASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 RNU6-1124P-201ENST00000384169 107 ntBASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 AL023284.1-201ENST00000403956 276 ntBASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 AC099677.2-201ENST00000436385 175 ntBASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 AL049830.1-201ENST00000468034 425 ntBASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 RPL23AP42-201ENST00000471152 471 ntBASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 AC108729.3-201ENST00000513484 108 ntBASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 AC026421.1-201ENST00000519101 163 ntBASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 FAM71BP1-201ENST00000604431 523 ntBASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
CNTNAP4Q9C0A0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.85□□□□□ -1.95
CNTNAP4Q9C0A0 ZNF355P-201ENST00000427301 3216 ntBASIC2.85□□□□□ -1.95
CNTNAP4Q9C0A0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CNTNAP4Q9C0A0 MIR126-201ENST00000362291 85 ntBASIC2.85□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.49-201ENST00000362714 112 ntBASIC2.85□□□□□ -1.95
CNTNAP4Q9C0A0 RNU6-1113P-201ENST00000384348 107 ntBASIC2.85□□□□□ -1.95
CNTNAP4Q9C0A0 MIR1255A-201ENST00000408338 113 ntBASIC2.85□□□□□ -1.95
CNTNAP4Q9C0A0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.85□□□□□ -1.95
CNTNAP4Q9C0A0 RNU6-521P-201ENST00000516663 105 ntBASIC2.85□□□□□ -1.95
CNTNAP4Q9C0A0 RNU6-667P-201ENST00000517186 102 ntBASIC2.85□□□□□ -1.95
CNTNAP4Q9C0A0 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.85□□□□□ -1.95
CNTNAP4Q9C0A0 Y_RNA.818-201ENST00000618813 71 ntBASIC2.85□□□□□ -1.95
CNTNAP4Q9C0A0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.84□□□□□ -1.95
CNTNAP4Q9C0A0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
CNTNAP4Q9C0A0 SNORA67.3-201ENST00000384366 140 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 U8.13-201ENST00000390842 128 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 SNORD77.3-201ENST00000391113 65 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 RNA5SP467-201ENST00000391274 118 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 CST2P1-201ENST00000425770 87 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 RPS26P48-201ENST00000491713 339 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-904P-201ENST00000516206 101 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-1041P-201ENST00000516254 102 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-1291P-201ENST00000516591 104 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 SCARNA15-202ENST00000516881 127 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 MIR5009-201ENST00000578736 100 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 MIR4762-201ENST00000585261 75 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 AL137067.1-201ENST00000615933 120 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 U6.108-201ENST00000637764 58 ntBASIC2.84□□□□□ -1.96
CNTNAP4Q9C0A0 AL589743.1-201ENST00000551932 2712 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 Y_RNA.267-201ENST00000364679 109 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-160P-201ENST00000384591 107 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 MIR7-2-201ENST00000384970 110 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 MIR522-201ENST00000385071 87 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 RNA5SP323-201ENST00000391094 133 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 AL117342.1-201ENST00000404861 406 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 AC107297.1-201ENST00000459991 176 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 AC006483.1-201ENST00000487308 313 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 AC018868.1-201ENST00000491307 315 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 Y_RNA.666-201ENST00000516187 112 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-830P-201ENST00000516353 107 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 RNA5SP200-201ENST00000516360 103 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-1149P-201ENST00000516810 97 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 MIR4498-201ENST00000577599 66 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 AP000942.3-201ENST00000603702 160 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 AC006441.5-201ENST00000612680 209 ntBASIC2.83□□□□□ -1.96
CNTNAP4Q9C0A0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 MIR21-201ENST00000362134 72 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-1134P-201ENST00000365156 101 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 SNORA25B-201ENST00000365507 128 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 U8.9-201ENST00000365667 134 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-787P-201ENST00000384032 107 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 SNORA11.4-201ENST00000408823 129 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 PGBD4P5-201ENST00000445958 426 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 RNA5SP57-201ENST00000459463 123 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 RNU6-1270P-201ENST00000517128 108 ntBASIC2.82□□□□□ -1.96
CNTNAP4Q9C0A0 AC068339.1-201ENST00000526965 141 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 227.7 ms